Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATTTTTAAGAATAATGAGCAAAAGGCGAACTTGGGTAGCTCTCTTTGTCTTAGTCTATGGTATCCTTTTGTACTCTTCATGGAACCTTCTTCAATCAATCCTTAATTGGTACAACGCCACTGTCTCTCCTTCGTCCTCTTCGCCGGCGGTTAAAGGGTGGCCAGCAGCGGTTTACGCGTCGGTGATGCTGGGTGGAGTCTTCGGGGTGATGTCGATGGCAGCGGCGTTTGCGGTGGCGGTACCGGCGATGCTGATGACTTGGATTACTATCCTTGTGTTGCTGACTTTCTGTGGTACGGGGCGGAATGATCTTTTGATTGAAGGGAAAAAATTAACGGCTGAGATTTCTGGGGTAGTGGTGAAGATCTTGATCAAGGAAGGGAATTTTGTGGCTGCTTTTTGTGCTGTTTTGGGTTACTTTTTGCTGGTTAGGAAAAGTTCTAACGAGGCTGATTGAAGGTGAAGATTGTTTAGGTTCGGATATAGGTTTTGAATTAAGCATGGTGTTGTATTATTTACTTTAGATGCTTAATTAAAAACTTACTTTAACGTTGGATCATGTTAGTAGAATTGTAGTGTATAACAATGTGTTTCTAAATTCTAACTTTAATTTGAAAAGTAAGGTTTGGTGTAAACAATTTGTTTCTAAATTCTAACTTTAATTCGAAAGTTACATAGTTACCAATTATATGCCCCTCAAGGCCCCTGAGCCCTGAGGTGGCTCGTTACAGAGTTACGATGATAATGCCCCTCGTGCATGTTGAGTGAAGATCAGGACGGTGAGACACATACTATTGCTGCTGATGTAAATGCCGGTGATGTGCATTTTTATTTTCAGTGTATATGATGATTGGTTGATTCATGACCGTATTCTTAGCTTACATACCAATTGTGTTGTGTTTTCGTTCAAATATTTAATATGTCTGGAGTTTTGTTTTCGTTCGTACAGCCAATTATTTTATGATGATGATTTATCTTGGATTCGCGGCATGTATTACATAGGTTCTACTAGTATGTGCTAAATGTATGCAATAGCTTTGACTTGATTGAGCTTCAATTTAGTTCTTCATATTGTATTTTATATGCTTTTAGGTAATGCAAATACAGTGATCACTACAGAGTACCTATTTATAATATATTAAAACTCCATTCTGATCGACTATTTGGTCGTTGTTGTTGTTCTGATAGACTATGGTATTGTGAAATTAAAAATCTGTAAAACCGGTTTTCTTGAATGGATTTTGTAGGATAATGATATGATGGGAGGGGGATGTGTGAGGGCACATTGTGATGTTGTTAAGCCGCAGCTCAAGGCCGCCTGTCATAACAAGGTATAGTTACTGTTACAGTTTATCCATCACCTTAGAGAATAGAGCTCAATCCTATAACTTTAGTTTTGTAGATGTTGTCTGTTGCCAACAGACAACAGTTGATGACAAGATGATAACACCTATCTAATTTGATTAACCTTAGATGCAGAAACCCAATGCGAACGAACTGTGAGGTTGAGGCATTTGGCCAAATAGTGAAGTGATTTGATAAATTGAAACGGAAATGGGATTTTAGCAGTTCCCCAGGGTAGGGATCTAGATCTCTGCTACTGGTTGATATTAACATGTATCCTTTTAC ATGTTATTTTTAAGAATAATGAGCAAAAGGCGAACTTGGGTAGCTCTCTTTGTCTTAGTCTATGGTATCCTTTTGTACTCTTCATGGAACCTTCTTCAATCAATCCTTAATTGGTACAACGCCACTGTCTCTCCTTCGTCCTCTTCGCCGGCGGTTAAAGGGTGGCCAGCAGCGGTTTACGCGTCGGTGATGCTGGGTGGAGTCTTCGGGGTGATGTCGATGGCAGCGGCGTTTGCGGTGGCGGTACCGGCGATGCTGATGACTTGGATTACTATCCTTGTGTTGCTGACTTTCTGTGGTACGGGGCGGAATGATCTTTTGATTGAAGGGAAAAAATTAACGGCTGAGATTTCTGGGGTAGTGGTGAAGATCTTGATCAAGGAAGGGAATTTTGTGGCTGCTTTTTGTGCTGTTTTGGGTTACTTTTTGCTGGATAATGATATGATGGGAGGGGGATGTGTGAGGGCACATTGTGATGTTGTTAAGCCGCAGCTCAAGGCCGCCTGTCATAACAAGATGCAGAAACCCAATGCGAACGAACTGTGAGGTTGAGGCATTTGGCCAAATAGTGAAGTGATTTGATAAATTGAAACGGAAATGGGATTTTAGCAGTTCCCCAGGGTAGGGATCTAGATCTCTGCTACTGGTTGATATTAACATGTATCCTTTTAC ATGTTATTTTTAAGAATAATGAGCAAAAGGCGAACTTGGGTAGCTCTCTTTGTCTTAGTCTATGGTATCCTTTTGTACTCTTCATGGAACCTTCTTCAATCAATCCTTAATTGGTACAACGCCACTGTCTCTCCTTCGTCCTCTTCGCCGGCGGTTAAAGGGTGGCCAGCAGCGGTTTACGCGTCGGTGATGCTGGGTGGAGTCTTCGGGGTGATGTCGATGGCAGCGGCGTTTGCGGTGGCGGTACCGGCGATGCTGATGACTTGGATTACTATCCTTGTGTTGCTGACTTTCTGTGGTACGGGGCGGAATGATCTTTTGATTGAAGGGAAAAAATTAACGGCTGAGATTTCTGGGGTAGTGGTGAAGATCTTGATCAAGGAAGGGAATTTTGTGGCTGCTTTTTGTGCTGTTTTGGGTTACTTTTTGCTGGATAATGATATGATGGGAGGGGGATGTGTGAGGGCACATTGTGATGTTGTTAAGCCGCAGCTCAAGGCCGCCTGTCATAACAAGATGCAGAAACCCAATGCGAACGAACTGTGA MLFLRIMSKRRTWVALFVLVYGILLYSSWNLLQSILNWYNATVSPSSSSPAVKGWPAAVYASVMLGGVFGVMSMAAAFAVAVPAMLMTWITILVLLTFCGTGRNDLLIEGKKLTAEISGVVVKILIKEGNFVAAFCAVLGYFLLDNDMMGGGCVRAHCDVVKPQLKAACHNKMQKPNANEL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03061.1 vs. NCBI nr
Match: gi|902169970|gb|KNA07752.1| (hypothetical protein SOVF_169020 [Spinacia oleracea]) HSP 1 Score: 269.6 bits (688), Expect = 3.900e-69 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1
BLAST of Spo03061.1 vs. NCBI nr
Match: gi|731355196|ref|XP_010689013.1| (PREDICTED: uncharacterized protein LOC104902809 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 219.2 bits (557), Expect = 6.000e-54 Identity = 119/145 (82.07%), Postives = 130/145 (89.66%), Query Frame = 1
BLAST of Spo03061.1 vs. NCBI nr
Match: gi|697162805|ref|XP_009590209.1| (PREDICTED: uncharacterized protein LOC104087447 [Nicotiana tomentosiformis]) HSP 1 Score: 177.9 bits (450), Expect = 1.500e-41 Identity = 100/144 (69.44%), Postives = 118/144 (81.94%), Query Frame = 1
BLAST of Spo03061.1 vs. NCBI nr
Match: gi|225446372|ref|XP_002274122.1| (PREDICTED: uncharacterized protein LOC100260881 [Vitis vinifera]) HSP 1 Score: 177.6 bits (449), Expect = 2.000e-41 Identity = 97/144 (67.36%), Postives = 119/144 (82.64%), Query Frame = 1
BLAST of Spo03061.1 vs. NCBI nr
Match: gi|147784578|emb|CAN70485.1| (hypothetical protein VITISV_041712 [Vitis vinifera]) HSP 1 Score: 177.6 bits (449), Expect = 2.000e-41 Identity = 97/144 (67.36%), Postives = 119/144 (82.64%), Query Frame = 1
BLAST of Spo03061.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QKI1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_169020 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 2.700e-69 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1
BLAST of Spo03061.1 vs. UniProtKB/TrEMBL
Match: F6H5D6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g03600 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.400e-41 Identity = 97/144 (67.36%), Postives = 119/144 (82.64%), Query Frame = 1
BLAST of Spo03061.1 vs. UniProtKB/TrEMBL
Match: A5BS79_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041712 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.400e-41 Identity = 97/144 (67.36%), Postives = 119/144 (82.64%), Query Frame = 1
BLAST of Spo03061.1 vs. UniProtKB/TrEMBL
Match: A0A061E501_THECC (Pyrroline-5-carboxylate reductase 1 OS=Theobroma cacao GN=TCM_008118 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 5.900e-40 Identity = 94/143 (65.73%), Postives = 114/143 (79.72%), Query Frame = 1
BLAST of Spo03061.1 vs. UniProtKB/TrEMBL
Match: A0A118JXV0_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_001252 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 7.700e-40 Identity = 96/144 (66.67%), Postives = 117/144 (81.25%), Query Frame = 1
BLAST of Spo03061.1 vs. TAIR (Arabidopsis)
Match: AT4G03600.1 (unknown protein) HSP 1 Score: 156.8 bits (395), Expect = 1.300e-38 Identity = 84/143 (58.74%), Postives = 108/143 (75.52%), Query Frame = 1
BLAST of Spo03061.1 vs. TAIR (Arabidopsis)
Match: AT1G03730.1 (unknown protein) HSP 1 Score: 153.7 bits (387), Expect = 1.100e-37 Identity = 86/144 (59.72%), Postives = 108/144 (75.00%), Query Frame = 1
BLAST of Spo03061.1 vs. TAIR (Arabidopsis)
Match: AT4G28330.1 (unknown protein) HSP 1 Score: 149.8 bits (377), Expect = 1.600e-36 Identity = 79/145 (54.48%), Postives = 105/145 (72.41%), Query Frame = 1
BLAST of Spo03061.1 vs. TAIR (Arabidopsis)
Match: AT4G28340.1 (unknown protein) HSP 1 Score: 142.9 bits (359), Expect = 1.900e-34 Identity = 78/145 (53.79%), Postives = 104/145 (71.72%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03061.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03061.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03061.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo03061.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
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