Spo03024 (gene)

Overview
NameSpo03024
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionChlorophyll a-b binding protein 1, chloroplastic (Chlorophyll a-b protein 140) (CAB-140) (LHCII type I CAB-1) (Precursor)
LocationSuper_scaffold_211 : 743662 .. 744465 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCCACCTCAATGGCTCTCTCTTCTCCCTCCCTTGCTGGAAAGGCCATAAAGCTCGGCCCAACCGCCTCCGAAATCCTCAGTGAGGGAAGGGTCACCATGAGGAAGACTGCCGGAAAGCCCAAGAATGTTTCATCAGGCAGCCCATGGTACGGCCCAGACCGTGTTAAATACTTGGGTCCATTCTCTGGTGAAGCCCCATCTTACCTCACTGGTGAATTCCCCGGTGACTATGGTTGGGACACTGCTGGTCTTTCCGCTGACCCTGAGACTTTTTCTAAGAACCGTGAGCTTGAGGTGATCCACTGCCGATGGGCCATGTTGGGTGCTTTGGGTTGTGTTTTCCCAGAACTCTTGGCCCGTAACGGTGTTAAGTTCGGTGAGGCTGTATGGTTCAAGGCCGGTTCACAAATCTTTAGCGAGGGCGGGCTTGACTACTTGGGTAACCCAAGTTTGGTCCATGCTCAAAGTATCCTTGCTATATGGGCTTGCCAAGTTATCTTGATGGGTGCCGTTGAGGGTTATCGTATTGCCGGTGGACCTCTCGGTGAGGTGGTGGACCCACTTTACCCCGGAGGTAGCTTTGACCCATTGGGCTTGGCTGATGACCCTGAAGCTTTCGCTGAGTTGAAGGTCAAGGAGATCAAGAATGGTAGATTGGCAATGTTTTCAATGTTCGGATTCTTTGTTCAAGCTATTGTTACAGGTAAGGGCCCATTAGAGAACCTAGCCGACCATCTTGCCGACCCAGTTAACAACAACGCTTGGTCTTTTGCCACTAACTTTGTTCCTGGCAAGTGA

mRNA sequence

ATGGCCTCCACCTCAATGGCTCTCTCTTCTCCCTCCCTTGCTGGAAAGGCCATAAAGCTCGGCCCAACCGCCTCCGAAATCCTCAGTGAGGGAAGGGTCACCATGAGGAAGACTGCCGGAAAGCCCAAGAATGTTTCATCAGGCAGCCCATGGTACGGCCCAGACCGTGTTAAATACTTGGGTCCATTCTCTGGTGAAGCCCCATCTTACCTCACTGGTGAATTCCCCGGTGACTATGGTTGGGACACTGCTGGTCTTTCCGCTGACCCTGAGACTTTTTCTAAGAACCGTGAGCTTGAGGTGATCCACTGCCGATGGGCCATGTTGGGTGCTTTGGGTTGTGTTTTCCCAGAACTCTTGGCCCGTAACGGTGTTAAGTTCGGTGAGGCTGTATGGTTCAAGGCCGGTTCACAAATCTTTAGCGAGGGCGGGCTTGACTACTTGGGTAACCCAAGTTTGGTCCATGCTCAAAGTATCCTTGCTATATGGGCTTGCCAAGTTATCTTGATGGGTGCCGTTGAGGGTTATCGTATTGCCGGTGGACCTCTCGGTGAGGTGGTGGACCCACTTTACCCCGGAGGTAGCTTTGACCCATTGGGCTTGGCTGATGACCCTGAAGCTTTCGCTGAGTTGAAGGTCAAGGAGATCAAGAATGGTAGATTGGCAATGTTTTCAATGTTCGGATTCTTTGTTCAAGCTATTGTTACAGGTAAGGGCCCATTAGAGAACCTAGCCGACCATCTTGCCGACCCAGTTAACAACAACGCTTGGTCTTTTGCCACTAACTTTGTTCCTGGCAAGTGA

Coding sequence (CDS)

ATGGCCTCCACCTCAATGGCTCTCTCTTCTCCCTCCCTTGCTGGAAAGGCCATAAAGCTCGGCCCAACCGCCTCCGAAATCCTCAGTGAGGGAAGGGTCACCATGAGGAAGACTGCCGGAAAGCCCAAGAATGTTTCATCAGGCAGCCCATGGTACGGCCCAGACCGTGTTAAATACTTGGGTCCATTCTCTGGTGAAGCCCCATCTTACCTCACTGGTGAATTCCCCGGTGACTATGGTTGGGACACTGCTGGTCTTTCCGCTGACCCTGAGACTTTTTCTAAGAACCGTGAGCTTGAGGTGATCCACTGCCGATGGGCCATGTTGGGTGCTTTGGGTTGTGTTTTCCCAGAACTCTTGGCCCGTAACGGTGTTAAGTTCGGTGAGGCTGTATGGTTCAAGGCCGGTTCACAAATCTTTAGCGAGGGCGGGCTTGACTACTTGGGTAACCCAAGTTTGGTCCATGCTCAAAGTATCCTTGCTATATGGGCTTGCCAAGTTATCTTGATGGGTGCCGTTGAGGGTTATCGTATTGCCGGTGGACCTCTCGGTGAGGTGGTGGACCCACTTTACCCCGGAGGTAGCTTTGACCCATTGGGCTTGGCTGATGACCCTGAAGCTTTCGCTGAGTTGAAGGTCAAGGAGATCAAGAATGGTAGATTGGCAATGTTTTCAATGTTCGGATTCTTTGTTCAAGCTATTGTTACAGGTAAGGGCCCATTAGAGAACCTAGCCGACCATCTTGCCGACCCAGTTAACAACAACGCTTGGTCTTTTGCCACTAACTTTGTTCCTGGCAAGTGA

Protein sequence

MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSFATNFVPGK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo03024.1Spo03024.1mRNA


Homology
[Close]
BLAST of Spo03024.1 vs. NCBI nr
Match: gi|283549609|emb|CAX64458.1| (major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia oleracea])

HSP 1 Score: 548.9 bits (1413), Expect = 4.900e-153
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAWSFATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. NCBI nr
Match: gi|133917261|emb|CAJ77390.1| (major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea])

HSP 1 Score: 544.7 bits (1402), Expect = 9.300e-152
Identity = 264/267 (98.88%), Postives = 266/267 (99.63%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSPSLAGKAIKLGPTASEIL EGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAWSFATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. NCBI nr
Match: gi|902212423|gb|KNA16961.1| (hypothetical protein SOVF_084380 [Spinacia oleracea])

HSP 1 Score: 534.6 bits (1376), Expect = 9.600e-149
Identity = 256/267 (95.88%), Postives = 263/267 (98.50%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSPSLAGKA+KLGPTASEI+ EGR+TMRKTAGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. NCBI nr
Match: gi|731373030|ref|XP_010666522.1| (PREDICTED: uncharacterized protein LOC104883672 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 533.9 bits (1374), Expect = 1.600e-148
Identity = 255/267 (95.51%), Postives = 263/267 (98.50%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSPSLAGKA+ LGP ASEIL EGR+TMRKTAGKPK VSSGSPWYGPDRVKYL
Sbjct: 358 MATSTMALSSPSLAGKAVNLGPNASEILGEGRITMRKTAGKPKQVSSGSPWYGPDRVKYL 417

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 418 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 477

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 478 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 537

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 538 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 597

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 598 LENLADHLADPVNNNAWAFATNFVPGK 624
[Close]
BLAST of Spo03024.1 vs. NCBI nr
Match: gi|870842707|gb|KMS96057.1| (hypothetical protein BVRB_002570 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 533.9 bits (1374), Expect = 1.600e-148
Identity = 255/267 (95.51%), Postives = 263/267 (98.50%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSPSLAGKA+ LGP ASEIL EGR+TMRKTAGKPK VSSGSPWYGPDRVKYL
Sbjct: 1   MATSTMALSSPSLAGKAVNLGPNASEILGEGRITMRKTAGKPKQVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. UniProtKB/TrEMBL
Match: D2T2F7_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.4 PE=3 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 3.400e-153
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAWSFATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. UniProtKB/TrEMBL
Match: A4F3R3_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.2 PE=3 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 6.400e-152
Identity = 264/267 (98.88%), Postives = 266/267 (99.63%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSPSLAGKAIKLGPTASEIL EGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAWSFATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBU9_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=SOVF_084380 PE=3 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 6.700e-149
Identity = 256/267 (95.88%), Postives = 263/267 (98.50%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSPSLAGKA+KLGPTASEI+ EGR+TMRKTAGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B8D4_BETVU (Chlorophyll a-b binding protein, chloroplastic OS=Beta vulgaris subsp. vulgaris GN=BVRB_002570 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 1.100e-148
Identity = 255/267 (95.51%), Postives = 263/267 (98.50%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSPSLAGKA+ LGP ASEIL EGR+TMRKTAGKPK VSSGSPWYGPDRVKYL
Sbjct: 1   MATSTMALSSPSLAGKAVNLGPNASEILGEGRITMRKTAGKPKQVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. UniProtKB/TrEMBL
Match: B3WFZ6_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.3 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 1.500e-148
Identity = 255/267 (95.51%), Postives = 263/267 (98.50%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSPSLAGKA+KLGPTASEI+ EGR+TMRKTAGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 1.300e-150
Identity = 255/267 (95.51%), Postives = 263/267 (98.50%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSPSLAGKA+KLGPTASEI+ EGR+TMRKTAGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 1.300e-145
Identity = 245/267 (91.76%), Postives = 259/267 (97.00%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSPS AGKA+KL P++SEI   G+VTMRKTA K K VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.100e-144
Identity = 246/267 (92.13%), Postives = 257/267 (96.25%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSS + AGKA+KL P++SEI   GRVTMRKTA K K  SSGSPWYGPDRVKYL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 7.100e-144
Identity = 244/267 (91.39%), Postives = 254/267 (95.13%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+ +MALSSPS AGKA+K  P++SEI   G+ TMRKT  K K VSSGSPWYGPDRVKYL
Sbjct: 1   MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTA LSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAWS+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSYATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 3.500e-143
Identity = 243/267 (91.01%), Postives = 257/267 (96.25%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++ ALSSP  AGKA+KL P++SE+   G+VTMRKTA K K VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTTALSSP-FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAWS+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSYATNFVPGK 266
[Close]
BLAST of Spo03024.1 vs. TAIR (Arabidopsis)
Match: AT1G29930.1 (chlorophyll A/B binding protein 1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.400e-137
Identity = 236/268 (88.06%), Postives = 250/268 (93.28%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSP+ AGKA+KL P ASE+L  GRVTMRKT  KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWSFATNFVPGK 268
           P+ENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. TAIR (Arabidopsis)
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2)

HSP 1 Score: 484.2 bits (1245), Expect = 5.200e-137
Identity = 235/268 (87.69%), Postives = 249/268 (92.91%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSP+ AGKA+ L P ASE+L  GRVTMRKT  KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWSFATNFVPGK 268
           P+ENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. TAIR (Arabidopsis)
Match: AT1G29910.1 (chlorophyll A/B binding protein 3)

HSP 1 Score: 484.2 bits (1245), Expect = 5.200e-137
Identity = 235/268 (87.69%), Postives = 249/268 (92.91%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSP+ AGKA+ L P ASE+L  GRVTMRKT  KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWSFATNFVPGK 268
           P+ENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPGK 267
[Close]
BLAST of Spo03024.1 vs. TAIR (Arabidopsis)
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2)

HSP 1 Score: 479.6 bits (1233), Expect = 1.300e-135
Identity = 236/268 (88.06%), Postives = 248/268 (92.54%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSP+ AGKA+K  P AS++L  GRVTMRKT  KPK   SGSPWYG DRVKYL
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWSFATNFVPGK 268
           PLENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAFATNFVPGK 265
[Close]
BLAST of Spo03024.1 vs. TAIR (Arabidopsis)
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1)

HSP 1 Score: 476.5 bits (1225), Expect = 1.100e-134
Identity = 234/268 (87.31%), Postives = 247/268 (92.16%), Query Frame = 1 

		  

Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSP+L GKA+KL P ASE+   GR+TMRK A KP    SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRK-ASKPTG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWSFATNFVPGK 268
           PLENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAFATNFVPGK 266
The following BLAST results are available for this feature:
BLAST of Spo03024.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|283549609|emb|CAX64458.1|4.9e-153100.major chlorophyll a/b binding ... [more]
gi|133917261|emb|CAJ77390.1|9.3e-15298.8major chlorophyll a/b binding ... [more]
gi|902212423|gb|KNA16961.1|9.6e-14995.8hypothetical protein SOVF_0843... [more]
gi|731373030|ref|XP_010666522.1|1.6e-14895.5PREDICTED: uncharacterized pro... [more]
gi|870842707|gb|KMS96057.1|1.6e-14895.5hypothetical protein BVRB_0025... [more]
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BLAST of Spo03024.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
D2T2F7_SPIOL3.4e-153100.Chlorophyll a-b binding protei... [more]
A4F3R3_SPIOL6.4e-15298.8Chlorophyll a-b binding protei... [more]
A0A0K9RBU9_SPIOL6.7e-14995.8Chlorophyll a-b binding protei... [more]
A0A0J8B8D4_BETVU1.1e-14895.5Chlorophyll a-b binding protei... [more]
B3WFZ6_SPIOL1.5e-14895.5Chlorophyll a-b binding protei... [more]
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BLAST of Spo03024.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CB2A_SPIOL1.3e-15095.5Chlorophyll a-b binding protei... [more]
CB24_TOBAC1.3e-14591.7Chlorophyll a-b binding protei... [more]
CB2G_SOLLC1.1e-14492.1Chlorophyll a-b binding protei... [more]
CB25_PETSP7.1e-14491.3Chlorophyll a-b binding protei... [more]
CB21_TOBAC3.5e-14391.0Chlorophyll a-b binding protei... [more]
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BLAST of Spo03024.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G29930.11.4e-13788.0chlorophyll A/B binding protei... [more]
AT1G29920.15.2e-13787.6chlorophyll A/B-binding protei... [more]
AT1G29910.15.2e-13787.6chlorophyll A/B binding protei... [more]
AT2G34420.11.3e-13588.0photosystem II light harvestin... [more]
AT2G34430.11.1e-13487.3light-harvesting chlorophyll-p... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 1..267
score: 1.6E
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 67..233
score: 5.5
IPR023329Chlorophyll a/b binding protein domainGENE3D1.10.3460.10coord: 60..258
score: 7.1
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 50..264
score: 1.57
NoneNo IPR availablePANTHERPTHR21649:SF26CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 1..267
score: 1.6E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0007219 Notch signaling pathway
biological_process GO:0001510 RNA methylation
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0071482 cellular response to light stimulus
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0035970 peptidyl-threonine dephosphorylation
biological_process GO:0010207 photosystem II assembly
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0010155 regulation of proton transport
biological_process GO:0006364 rRNA processing
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0042545 cell wall modification
biological_process GO:0008643 carbohydrate transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0006897 endocytosis
cellular_component GO:0010287 plastoglobule
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0009523 photosystem II
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0030093 chloroplast photosystem I
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005618 cell wall
cellular_component GO:0009507 chloroplast
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016020 membrane
molecular_function GO:0005351 carbohydrate:proton symporter activity
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
RNA-Seq Expression