Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTAACAGATAACACCGCTGTATGCCTGGTGGCATGGTGCTGTTCGTTCTAGGTCCAAAATTCCAAAGGAAACACGTCATCAGCTCAAAACAAATCATACAGAAAACATAAACATTTCTGGGTTTCCCACTTTTGATTTCCTATTTTTCCCACAAAACCCACAAATTTAAACAATGAAAGCAGTAGTAATCACTACCCCAGGAGGCCCAGAAGTGCTGCAACTGCAAGAAGTAGAAGACCCCCAAATCAAAGACAATGAAGTTTTGATCAAAGTTGAAGCAACTGCCCTTAATCGAGCAGATACCGTTCAAAGGAAGGGTTCCTACCCTCCCCCACCTGGGGCTAGTCCTTACCCTGGTCTAGAATGTTCTGGAACCATCCTTCAAGTTGGCAATGATGTCACTCGCTGGAAAGTTGGTGACCAGGTTATCAATTATTTTTAGTTCTTCTGCAGCTTCATTATTTTAATCTTTTGCTGCTCTTTGAAATTTGGTGAATTGGGTTTTTTTTTGTAATTTTCTCAGGAAGTTGTAATCTTTTCAATTTGGTATTGTTGGTGTTGATTGACTGGTATTATCATATTAATTTGTGCATTTTGTCTTCGCATTTAATTGGGGTTTATGTGGAAGGGATGGGATAATCTTTGCTTCAAATATTTGTTGATTGATGGAAGTGAAGGCAAACTACTGCTTTAGTTTTGAACTTGTAAATTTGATGTAGCAGATTGTTCAGTAATGCTAGAGATGATTGCGTTCCGAGCTGACCGAAAATTGCCCCGAAAGTTTTGATTTTGAATAATGTAGACCCGAAAACTGGCTTAGCCTGTCAACTAGAATCAACCTGTTGAGACCCATATGATTATATGAAAATAAGCACATGTAGAGTTGTTCCACGTCGGAGTAGAAGGGTGATAATAACCAACTTATAACTAGCTTGGTGAGCTACTCCTCCAATAGCCAATAATGCAGGGTGTTAGGGGCGGTGGCGGTGGGTGATCTAACCTGAAAACCAACCCAAAAGGCCCTTAAGTTTGATCATTGTGGTGTTTATTGGACCAAATTGGGGGGGGGGGGGATACTGGTCTCTCTTAGCAGGCATGTTGATTAGTAAAGATAGTAGTCTGTTGTTGTACAAATTGGAGAAAAAAAGATCGCTGTAGACTCTACATGAGATAATTCTTGGTTCATGCAGCCAATCCCATCCGTCTGGTAGTTAGGTTTTGGTATTGTTTTTAGATTGGGTAGATTGCCTCTTGTGATGATTTTTAAGAACTATTACCATTTGATGTTTTCTGGTGGATTATCATGGGATTTAACCCACTTGTATTAGCATTATAGCATCATTTATCGAGAATTTAGATCATTTATCCAAGATGTTCTGGAAAGCCGGCCAGGATTTCGACTTACATAGAAATGTTACATCAATCCATTAAAGTAGCAAACATGATTTCTGAATTCTGGAGTAGTAGTTTGAACACCTGACAGATGTGGCAATTTTTTTGACTAGCCTCAGGACAAAGATTTCAGAAGTGCATGAATTGGATGTGACATAAGTGCTGATTTCATATGCCTTTTCTCTACTTTGAATTGTTTAAGTGCCATATCAATACATCATACCCAATACTAAGAACTTAGGACTTAGGATTGGAGTTGGAGTTGGAGTTTGAGTAACAGAGGTATTCTATCATGCTTTTAAGTGATCAGAATTGTTGATGTTTGTTGTATGTAGGTGTGTGCGCTTCTTGGTGGAGGAGGCTACGCTGAGAAAGTGGTTGTTCCTGCTGGACATGTTCTTCCTGTTCCATCTGGTGTTTCACTCAAGGAAGCTGCAAGTTTCCCAGAGGTGGCATGCACGGTTTGGTCAACTGTTTTCATGACGAGTCAACTTTCAGCGGGAGAGACATTTTTGGTAACTAACAAAGCTACTCTTTTTCTGTATCTTTGCCAGTGTTAAATAGTACGCAAATCCTTGTCCTCTCATACTAAAAAGTCTCAATGTACTGAAACTACACAAAATTATTTGATTCGACTCCTAGGGTGTTGGGCTCTAATTGCAATCTCCTCCCCACCCTAGCTCCTTAGTCTTCTTACAATCATCAAGACTTCTTACCCATTAAGCTCGATGAATATCGTTCAATGGTTATTTCACTTTCGTGCTGATTGTAGGTGTTCATATGAGAGAACCTTAAATTTCGTTTGACAAAGGGTTTATAGAAATACCTGAGAGATGTTATGAGTTCTTTGTCAAAATATCGCCTTCTGCCATCTTTTTGTGTCAAAGCATGGTATCTCATTCAATGATGTTTGTAAGCTACCATTCTTTGAAAGTGGCTTAAACTATTCTTGCAATTTAATTGTTCTCTGTAATCAACAATCTTTTTCAGGTTCATGGGGGCTCCAGTGGCATTGGTACTTTCGCTATTCAGATAGCTAAATACCATGGAGCAAAAGTATTTGTGACAGCAGGTTGGCAGATTTAAGTTGTTTTTCTGGAGTTCAAATGGGTTAAAATGAAGTAATAAACCTGACAGTCTGTTATTTGCTCTCTTCTTATCTAGGTACTGAAGAAAAGTTGGCATATTGTAAAGATATTGGAGCTGATGTGTGTATCAATTACAAGACTGAAGATTTTGTTGCGAGAGTGAAAGAAGAAACAGCTGGAAAAGGTATTGTTTTGAGGGGAAACAGATCGTGTACGGAGTATTGTGGGATTCAAGTTGTTCCATTTTGCTTGCCATCTTAGTAAGCCGTAAGCATAATTGTTTGGATTAAACAAATAGGTGTTGATGTTATATTGGACAACATGGGAGGAAGTTACTTGCAGCGTAACATTGACAGCTTGAATTTAGATGGGCGGCTTTTTATCATTGGCTTTCAAGGTGGAGCTACTTCACAAATCAGCCTTGCAAGTTTAGCAGCAAAGAGACTCACGGTGCAAGGTATGCATATTTTTTTAACCCAAAGCTGGCATTCTATTGCTAAGAAAGTTTAGTTGGAATTTCATTTTGTAGCCACATTCTAATCTGATGCCCACCTAGAAGCCATAGAAAAGCTATGTTACTCGAACCCTTACACCATTTCCTTTTTTTGATTCGTTTTTGGCACTGCAATTGACATTGTGTTAGTAGTTGTTACGGAGTACACGATAAGATAATTCAGGCACCTGATCAACTGTTGCATAACTAATACTGTACTGTTTTTAGCTGCTGGCTTGCGGAATAGAACTCCGGAGAACAAAGCAGTTATAGTGAAGGAAGTGGAGAAGAATGTGTGGCCTGCAATCATAGGAAAGAAGGTGAAGCCTGTAGTTCACAAGTACTTTCCTCTGTCACAGGCAGCTGAAGCCCACCAGCTTATGGAAAGTAGCAAGCATATAGGCAAAATATTGCTTCTTCCATGACAAATGAGATGTTTCAGCCAACGAGGCCCGTCGATGAACTCAGTTCTTACAAGTGGAGCAAATGTACCTCTACAACAATCTAATTGGCTGATAGTTCTAGCCATACTCTGTTGTACACTGATGATACTCTGTTGTACACTGATGCAAGTTGAATATGTATGTTTTGGAAAAGATGTAGAGTCAATAAAAAAATCCAGACACTGTTGAGAACTTGAGATGGTTACTGGTTCATTTCCTTTGGATGCTTGATTAACTAGAATGTGCAAATACGCAACTACGATATTGGTGCTTTGTTGTTTTCGGGCCGGTCCCAAACAAAACATTTCATCCCATTATGTCCGAAAATTTTTGGTTGTATCCGTGTACAGCCAGAGCGGTTGTACCCCCATCCAAAATGAACATTTATTATTTCGAAAATTAACATTTATTTTATTTATTT CCTAACAGATAACACCGCTGTATGCCTGGTGGCATGGTGCTGTTCGTTCTAGGTCCAAAATTCCAAAGGAAACACGTCATCAGCTCAAAACAAATCATACAGAAAACATAAACATTTCTGGGTTTCCCACTTTTGATTTCCTATTTTTCCCACAAAACCCACAAATTTAAACAATGAAAGCAGTAGTAATCACTACCCCAGGAGGCCCAGAAGTGCTGCAACTGCAAGAAGTAGAAGACCCCCAAATCAAAGACAATGAAGTTTTGATCAAAGTTGAAGCAACTGCCCTTAATCGAGCAGATACCGTTCAAAGGAAGGGTTCCTACCCTCCCCCACCTGGGGCTAGTCCTTACCCTGGTCTAGAATGTTCTGGAACCATCCTTCAAGTTGGCAATGATGTCACTCGCTGGAAAGTTGGTGACCAGGTGTGTGCGCTTCTTGGTGGAGGAGGCTACGCTGAGAAAGTGGTTGTTCCTGCTGGACATGTTCTTCCTGTTCCATCTGGTGTTTCACTCAAGGAAGCTGCAAGTTTCCCAGAGGTGGCATGCACGGTTTGGTCAACTGTTTTCATGACGAGTCAACTTTCAGCGGGAGAGACATTTTTGGTTCATGGGGGCTCCAGTGGCATTGGTACTTTCGCTATTCAGATAGCTAAATACCATGGAGCAAAAGTATTTGTGACAGCAGGTACTGAAGAAAAGTTGGCATATTGTAAAGATATTGGAGCTGATGTGTGTATCAATTACAAGACTGAAGATTTTGTTGCGAGAGTGAAAGAAGAAACAGCTGGAAAAGGTGTTGATGTTATATTGGACAACATGGGAGGAAGTTACTTGCAGCGTAACATTGACAGCTTGAATTTAGATGGGCGGCTTTTTATCATTGGCTTTCAAGGTGGAGCTACTTCACAAATCAGCCTTGCAAGTTTAGCAGCAAAGAGACTCACGGTGCAAGCTGCTGGCTTGCGGAATAGAACTCCGGAGAACAAAGCAGTTATAGTGAAGGAAGTGGAGAAGAATGTGTGGCCTGCAATCATAGGAAAGAAGGTGAAGCCTGTAGTTCACAAGTACTTTCCTCTGTCACAGGCAGCTGAAGCCCACCAGCTTATGGAAAGTAGCAAGCATATAGGCAAAATATTGCTTCTTCCATGACAAATGAGATGTTTCAGCCAACGAGGCCCGTCGATGAACTCAGTTCTTACAAGTGGAGCAAATGTACCTCTACAACAATCTAATTGGCTGATAGTTCTAGCCATACTCTGTTGTACACTGATGATACTCTGTTGTACACTGATGCAAGTTGAATATGTATGTTTTGGAAAAGATGTAGAGTCAATAAAAAAATCCAGACACTGTTGAGAACTTGAGATGGTTACTGGTTCATTTCCTTTGGATGCTTGATTAACTAGAATGTGCAAATACGCAACTACGATATTGGTGCTTTGTTGTTTTCGGGCCGGTCCCAAACAAAACATTTCATCCCATTATGTCCGAAAATTTTTGGTTGTATCCGTGTACAGCCAGAGCGGTTGTACCCCCATCCAAAATGAACATTTATTATTTCGAAAATTAACATTTATTTTATTTATTT ATGAAAGCAGTAGTAATCACTACCCCAGGAGGCCCAGAAGTGCTGCAACTGCAAGAAGTAGAAGACCCCCAAATCAAAGACAATGAAGTTTTGATCAAAGTTGAAGCAACTGCCCTTAATCGAGCAGATACCGTTCAAAGGAAGGGTTCCTACCCTCCCCCACCTGGGGCTAGTCCTTACCCTGGTCTAGAATGTTCTGGAACCATCCTTCAAGTTGGCAATGATGTCACTCGCTGGAAAGTTGGTGACCAGGTGTGTGCGCTTCTTGGTGGAGGAGGCTACGCTGAGAAAGTGGTTGTTCCTGCTGGACATGTTCTTCCTGTTCCATCTGGTGTTTCACTCAAGGAAGCTGCAAGTTTCCCAGAGGTGGCATGCACGGTTTGGTCAACTGTTTTCATGACGAGTCAACTTTCAGCGGGAGAGACATTTTTGGTTCATGGGGGCTCCAGTGGCATTGGTACTTTCGCTATTCAGATAGCTAAATACCATGGAGCAAAAGTATTTGTGACAGCAGGTACTGAAGAAAAGTTGGCATATTGTAAAGATATTGGAGCTGATGTGTGTATCAATTACAAGACTGAAGATTTTGTTGCGAGAGTGAAAGAAGAAACAGCTGGAAAAGGTGTTGATGTTATATTGGACAACATGGGAGGAAGTTACTTGCAGCGTAACATTGACAGCTTGAATTTAGATGGGCGGCTTTTTATCATTGGCTTTCAAGGTGGAGCTACTTCACAAATCAGCCTTGCAAGTTTAGCAGCAAAGAGACTCACGGTGCAAGCTGCTGGCTTGCGGAATAGAACTCCGGAGAACAAAGCAGTTATAGTGAAGGAAGTGGAGAAGAATGTGTGGCCTGCAATCATAGGAAAGAAGGTGAAGCCTGTAGTTCACAAGTACTTTCCTCTGTCACAGGCAGCTGAAGCCCACCAGCTTATGGAAAGTAGCAAGCATATAGGCAAAATATTGCTTCTTCCATGA MKAVVITTPGGPEVLQLQEVEDPQIKDNEVLIKVEATALNRADTVQRKGSYPPPPGASPYPGLECSGTILQVGNDVTRWKVGDQVCALLGGGGYAEKVVVPAGHVLPVPSGVSLKEAASFPEVACTVWSTVFMTSQLSAGETFLVHGGSSGIGTFAIQIAKYHGAKVFVTAGTEEKLAYCKDIGADVCINYKTEDFVARVKEETAGKGVDVILDNMGGSYLQRNIDSLNLDGRLFIIGFQGGATSQISLASLAAKRLTVQAAGLRNRTPENKAVIVKEVEKNVWPAIIGKKVKPVVHKYFPLSQAAEAHQLMESSKHIGKILLLP Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo02879.1 vs. NCBI nr
Match: gi|902195249|gb|KNA12784.1| (hypothetical protein SOVF_122830 [Spinacia oleracea]) HSP 1 Score: 640.6 bits (1651), Expect = 1.500e-180 Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 1
BLAST of Spo02879.1 vs. NCBI nr
Match: gi|731369582|ref|XP_010696602.1| (PREDICTED: quinone oxidoreductase PIG3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 585.9 bits (1509), Expect = 4.400e-164 Identity = 294/325 (90.46%), Postives = 311/325 (95.69%), Query Frame = 1
BLAST of Spo02879.1 vs. NCBI nr
Match: gi|1021578382|ref|XP_016179633.1| (PREDICTED: quinone oxidoreductase PIG3-like [Arachis ipaensis]) HSP 1 Score: 540.4 bits (1391), Expect = 2.100e-150 Identity = 270/325 (83.08%), Postives = 296/325 (91.08%), Query Frame = 1
BLAST of Spo02879.1 vs. NCBI nr
Match: gi|1012250012|ref|XP_015943332.1| (PREDICTED: quinone oxidoreductase PIG3-like [Arachis duranensis]) HSP 1 Score: 537.3 bits (1383), Expect = 1.800e-149 Identity = 268/325 (82.46%), Postives = 295/325 (90.77%), Query Frame = 1
BLAST of Spo02879.1 vs. NCBI nr
Match: gi|568827046|ref|XP_006467879.1| (PREDICTED: quinone oxidoreductase PIG3 [Citrus sinensis]) HSP 1 Score: 536.6 bits (1381), Expect = 3.100e-149 Identity = 267/325 (82.15%), Postives = 295/325 (90.77%), Query Frame = 1
BLAST of Spo02879.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1H3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_122830 PE=4 SV=1) HSP 1 Score: 640.6 bits (1651), Expect = 1.100e-180 Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 1
BLAST of Spo02879.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E105_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g199680 PE=4 SV=1) HSP 1 Score: 585.9 bits (1509), Expect = 3.100e-164 Identity = 294/325 (90.46%), Postives = 311/325 (95.69%), Query Frame = 1
BLAST of Spo02879.1 vs. UniProtKB/TrEMBL
Match: A0A067GAX2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019790mg PE=4 SV=1) HSP 1 Score: 535.4 bits (1378), Expect = 4.800e-149 Identity = 267/325 (82.15%), Postives = 295/325 (90.77%), Query Frame = 1
BLAST of Spo02879.1 vs. UniProtKB/TrEMBL
Match: B9H236_POPTR (Oxidoreductase family protein OS=Populus trichocarpa GN=POPTR_0004s03620g PE=4 SV=1) HSP 1 Score: 533.5 bits (1373), Expect = 1.800e-148 Identity = 264/324 (81.48%), Postives = 294/324 (90.74%), Query Frame = 1
BLAST of Spo02879.1 vs. UniProtKB/TrEMBL
Match: A5BVG0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008189 PE=4 SV=1) HSP 1 Score: 531.9 bits (1369), Expect = 5.300e-148 Identity = 263/325 (80.92%), Postives = 295/325 (90.77%), Query Frame = 1
BLAST of Spo02879.1 vs. ExPASy Swiss-Prot
Match: QORX_HUMAN (Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2) HSP 1 Score: 242.3 bits (617), Expect = 7.500e-63 Identity = 137/328 (41.77%), Postives = 202/328 (61.59%), Query Frame = 1
BLAST of Spo02879.1 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.500e-39 Identity = 110/331 (33.23%), Postives = 176/331 (53.17%), Query Frame = 1
BLAST of Spo02879.1 vs. ExPASy Swiss-Prot
Match: QOR_CAVPO (Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.400e-39 Identity = 109/330 (33.03%), Postives = 174/330 (52.73%), Query Frame = 1
BLAST of Spo02879.1 vs. ExPASy Swiss-Prot
Match: QOR_MOUSE (Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=1 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 4.100e-37 Identity = 109/333 (32.73%), Postives = 175/333 (52.55%), Query Frame = 1
BLAST of Spo02879.1 vs. ExPASy Swiss-Prot
Match: QOR_HUMAN (Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.000e-35 Identity = 103/330 (31.21%), Postives = 175/330 (53.03%), Query Frame = 1
BLAST of Spo02879.1 vs. TAIR (Arabidopsis)
Match: AT4G21580.1 (oxidoreductase, zinc-binding dehydrogenase family protein) HSP 1 Score: 483.0 bits (1242), Expect = 1.400e-136 Identity = 239/323 (73.99%), Postives = 277/323 (85.76%), Query Frame = 1
BLAST of Spo02879.1 vs. TAIR (Arabidopsis)
Match: AT5G61510.1 (GroES-like zinc-binding alcohol dehydrogenase family protein) HSP 1 Score: 166.4 bits (420), Expect = 2.900e-41 Identity = 117/330 (35.45%), Postives = 172/330 (52.12%), Query Frame = 1
BLAST of Spo02879.1 vs. TAIR (Arabidopsis)
Match: AT3G56460.1 (GroES-like zinc-binding alcohol dehydrogenase family protein) HSP 1 Score: 121.7 bits (304), Expect = 8.300e-28 Identity = 94/323 (29.10%), Postives = 154/323 (47.68%), Query Frame = 1
BLAST of Spo02879.1 vs. TAIR (Arabidopsis)
Match: AT1G23740.1 (Oxidoreductase, zinc-binding dehydrogenase family protein) HSP 1 Score: 102.1 bits (253), Expect = 6.800e-22 Identity = 100/340 (29.41%), Postives = 156/340 (45.88%), Query Frame = 1
BLAST of Spo02879.1 vs. TAIR (Arabidopsis)
Match: AT4G13010.1 (Oxidoreductase, zinc-binding dehydrogenase family protein) HSP 1 Score: 101.3 bits (251), Expect = 1.200e-21 Identity = 96/328 (29.27%), Postives = 146/328 (44.51%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02879.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02879.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02879.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo02879.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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