Spo02647 (gene)

Overview
NameSpo02647
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCalcium-binding EF-hand family protein isoform 1
LocationSpoScf_01265 : 34386 .. 39498 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTTTCTATAACAGAGTTCAAAGCTGTTACAAAGGAAATATGTAAGCTGCCATCCTTCTTCTCTATCGTCCTTTTCCAAAAGATTGATGTCAACGGTACAGAATTTGTCACCAGGTATACAACTTAATGATGGCAACGTTGCTGGAAATTGAAATTTATTCCTGTTTACTTTGCATGCTTTATACTTGTCATATAACATGTAATCCAATGCATCTGCAGTGTTGCGTTGATGAGGCTAGCTGAGATGGACTACTGTGGGACTACCAGGTAACAACCTTATTTAATATGTTTCTATATAGGGTTTTTGATGCTTTCATTGTGTGTAGTAGGTAAACATGAATTTGAAATTTTTTGTGCTGCATAATTTCCGAACTTTGGTAGGTGAGTCCTATTCTTTGGAAAAACTTTGGTGCTTCATAAGTAAATGTAATAAAATCAGCAGGCCTTAGTATCAGATTCTTTGATAACAATGTTGTTGAGATTTCTGCTGGAGGAATAACAGCACAGAAGAATGTTTTTTCTGTAGATGTTAGTGCAGGTTGCTTATCTGCATGAAAGAAAATTAACTGCAATGTATGCTTCTGTTTGTTTGAAGTTTGAATTGACTAGGGGCCTTATCATTTTTGCATTTATGTAAAGAAGGTCATGGATCTAAATTCCTTATAAGGAAACTATACTTATTTCCTCTTTTGCTTCTCACACATTGATTAAGGTGACCTCAGCCCACAAAAAGGTAGAAATTCATTGGACTTGTGAAATTGTCTAACATAAACATTGATCTGGATCCTCAATACAGCTATATAATCAAGATTTTTATTGACAAAAAGTATGCTTTGCCTTATCTGGTGTTGGATGCTTTGGTTGCTCATTTCATGAGATTTGTAGAAGACTCAAGGGTTATGCTAGTGATCTGGCATCAGACTCTTCTTGCCTTTGTTCAAAGGTTAGTAATCCTCCTCTCCCTGTAGAACAGAAAATAATTTCGTTGTCAATGACATGCTTGAGCATGTGGTTTCCCATTTTCATTTCTCCAAATATTTAAAGTTCTCAGGGACTTTTTCTTTTTTCCTGAACTTTGTGGTTTCTCTTGTTAATTTATAATGGCCTATCCCATCTTGAAGCATTCAGTTTCTTTGTATATCTGCTCATCTTTGTATGAAAATTATATTTTGTTTCTCTTTAGTTTTCAAAAAGGATGTCAGTTAATTATTTATGAGCTCTATGGAAATTAGTTATCTAGGTAATCTTGAGTAGGGTTTGTAAATTCCTGGAGATTAGTGTTTCAAATGTTGCTGTCATTGTTTCTTTAGGATTTCTATGGTCGATGGGATTGGAAATAGGTTCGTTTGTTGGTAGTTTAGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGAACCATAGGCGTGCATAACGAACTTTAAATGAGTCTTATAATCATATAACTAATCATCTAAATCATGAAAAAGGTTTAGAATGTGGATATAAGTTGGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGAACCATAGGCGTGCATAACAAACTTGAAATGAGTCTTATAATCATATAACTAATCATCTAAATCATGAAAAAGTTTAGAATTTGGACTTAGGTTCGTTTGTTGGCAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGGCCTATATTGACCCAAATGACCATTAGGCTTGCCTAACAAACTTGAAATGAGTTTCATAAACAAATAGCTAATCATATGAATCATGAAAAAGGGTTAGAATGTGGAAATAGGTTCGTTTGTTGGTAGTTGGGATCAAAAATGCCATTTTTGGCCATAAATGACATATATCGACCCAAATTACCCATAGGCGTGCATAAAGAACTTGAAATGAGTCTTATAAACATATAACTAATCATATGAATCATGAAAAACGTTTAGAATATGGAAATAGGTTCGTTTGTTGGTAATTGGGATCGAAAAAGCCATTTTTGGCCATAAATGACCTATATCGACTAAAATGAACCATAGGTGTGCATAACGAACTTGAAATGAGTTTTATAATCATATAACTAATAATCTAAATCATGAAAAAGGTTTAGAATTTGGATATAAGTTCGTTTGTTGTTAGTTGGGATCGAAAATGCCATTTTGGACATAAATGACCTATATCGACCCGAATGAACCATAGGCGTGCATAACGAACTTGAAATGAGTCTTATAATCATATAACTAATCATCTAAATCATGAAAAGGGTTTAGAATTTGGACTTAGGTTTCTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGGCCTATATCGACCCAAATGACCATTAGGCTTGCATAACGAACTTGAAATTAGTTTCATAAACATGTAACTAATCATATGAATCATGAAAAAGGGATAGAATGTGGAAATAGGTTCGTTTGTTGGTAGTTGGGATAAAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGCATAACGAACTTGAAATAAGTCTTATAAACATATAAGTAATCATATGAATCATGAAAAACGTTTAGAATATGGAAATAGGTTCGTTTGTTGGTAATTGAGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACTCAAATGAACCATAAGCGTGCATAACGAACTTGAAATGAGTGTTATAATCATATAAATAATCATCTAAATCATGAAAAAGGTTTAGAATGTGGATATAAGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTGGCCATAAATGACCTATATCGACCCAAATGAACCATAGGCGTGCATAACGAACTTGAAATGACTCTTATAATCATATAACTAATCATCTAAATCATGAAAGAGGTTTATAATTTGGACTTAGGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGGCCTATATCGACCCAAATGACCATTAGACTTGCATAACGAACTTGAAATGAGGTTCATAAACATATAACTAATCATATGAATCATGAAAAAGGGTTAGAATGTGGAAATAGGTTCGTTTGTTGGTAGTTGGGATCAAAAATGCCATTTTTGGCCTCAAATGACCTATATCGACCCAAATGAACCATAGGCGTGCATAACGAACTTGAAATGAGTCTTATAATCATATAACTAATCATCTAAATCATGAAAAAGGTTTAGAATGTGGATATAAGTTCATTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGAACCATAGGCTTGCATAACGAACTTGAAATGAGTCTTATAATCATATAACTAATCATCTAAATCATGAAAAAGGTTTAGAATTTGGACTTAGGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGGCCTATATCGACCCAAATGACCATTAGGCTTGCATAACGAACTTGAAATGAGTTTCATAAACATATAACTAATCATATGAATCATGAAAAAGGGTTAGAATGTGGATATAAGTTCGTTTGTTGGTAGTTGGGATCAAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGAATAACGAACTTGAAATGAGTCTTATAAACATATAACTAATCATATGAATCATGAAAAAGATTTAGAAAGTGTCCTTGTGTTCATTTGGTTATATTTGGGATCGAAAATACCAATATAATTTCTATTTTCGCATATGAAACTTAATTTAATTTATTGGTTTGCATGTACGTTGTTCTTTTAAAGGTTTTCAAAACACCAAAGGAGGGGCCCTTTAACAAAGAGGAGTTGGATGAAGTTCGAGACAAGTGGGCTACTTACTTCAACGATTGGGAACTACCCTCAGTGTAATAAATAGAGCAGGCTTGTAGTTATCCGTGACTCTTGCATTATTTTGTTATTTATCGATTTAATTAATTACATTTGAATTAATTCGGTAATATTATTGGAAATTTGAAAATAATATCATTTTTGAGGAATGTCAAGCTGATGTTTGGTGAAACAGTATTCTATAAATTATAATGCAGAATTTTATATTGTAAAATCAGAAATTATATTGCAGAATATCAGGAATTATATTGCAGATTTTTTTAAAAAAAAATAAACTCAAAAGTTGCCCTTGTTGCAAACAAGAGCAACTTATGTGAGGCTTATAAGTTGCCCTTGTTAAGGGCAACTTTTGATAATTTTACAAAAGTGACCCCCCCATAGGTGGCACATATGAAGGGCAACTTATAAGCCTATTTAAGGGCAACTTATGATGTTTTTTCCTCTAGTGATTTCTATTTCCGATAATATTTTCCGATACGAGCAATGTTTCCGTTTCCGGCAACATCTACGACTTGGATAATATTTCTATTTCCGTCATGATCCATATTTCCGTTTCCGGCAATATCATCATTTTAGGAGTATTCTTTATTCTGTCTTTTGACAATTTCAGCTCCCACTAGAACCGAGATCCGTCGTTTCCGAATGTTCATAAATAGAGTATTTAATGAATAATATATTCACTTAAATACTTGATCCGTTCACGTACTATTTGTGTGACCCTACGGGTTCAGTCAAGAGTAAGTTGTGGATTAATATTATTAATTCCACTTAAACTGAAGCGGCCTCTAGCTAGGCATTCAGCTCACTTGATCTCACTGAATTTATTAACTTGTTTAATTAATACTGAACCGCATTTATTAGATTTAACATTGAATGCATACTTGGACCAAGGGCATTATTTCCTTCAGTATGACTCTTCTAACTACCCACTGACCATCTGTCACACTAGCATACATGAGAGAATTACATCCACATTTCCTAGACTTTTTCTAGTTTCTCAAATTTGTTTTATTCACAAAGGATTTACCTGCTACGGGCCTCTTACTATGTTTGTCTGTTTCACCAAAGCAATCACATCTCCACGTGGCAGTAATTAGAACCTTACCCGGACCCTTCCCCGGACCAATAGCACCACAATGGACTACCCCAAACCCTTCTTGCCTTCCG

mRNA sequence

ATGGTGTTTTCTATAACAGAGTTCAAAGCTGTTACAAAGGAAATATGTAAGCTGCCATCCTTCTTCTCTATCGTCCTTTTCCAAAAGATTGATGTCAACGGTACAGAATTTGTCACCAGTGTTGCGTTGATGAGGCTAGCTGAGATGGACTACTGTGGGACTACCAGAAGACTCAAGGGTTATGCTAGTGATCTGGCATCAGACTCTTCTTGCCTTTGTTCAAAGGATTTACCTGCTACGGGCCTCTTACTATGTTTGTCTGTTTCACCAAAGCAATCACATCTCCACGTGGCAGTAATTAGAACCTTACCCGGACCCTTCCCCGGACCAATAGCACCACAATGGACTACCCCAAACCCTTCTTGCCTTCCG

Coding sequence (CDS)

ATGGTGTTTTCTATAACAGAGTTCAAAGCTGTTACAAAGGAAATATGTAAGCTGCCATCCTTCTTCTCTATCGTCCTTTTCCAAAAGATTGATGTCAACGGTACAGAATTTGTCACCAGTGTTGCGTTGATGAGGCTAGCTGAGATGGACTACTGTGGGACTACCAGAAGACTCAAGGGTTATGCTAGTGATCTGGCATCAGACTCTTCTTGCCTTTGTTCAAAGGATTTACCTGCTACGGGCCTCTTACTATGTTTGTCTGTTTCACCAAAGCAATCACATCTCCACGTGGCAGTAATTAGAACCTTACCCGGACCCTTCCCCGGACCAATAGCACCACAATGGACTACCCCAAACCCTTCTTGCCTTCCG

Protein sequence

MVFSITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTRRLKGYASDLASDSSCLCSKDLPATGLLLCLSVSPKQSHLHVAVIRTLPGPFPGPIAPQWTTPNPSCLP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02647.1Spo02647.1mRNA


Homology
[Close]
BLAST of Spo02647.1 vs. NCBI nr
Match: gi|902204654|gb|KNA14936.1| (hypothetical protein SOVF_102760 [Spinacia oleracea])

HSP 1 Score: 100.1 bits (248), Expect = 2.800e-18
Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 1 

		  

Query: 7   EFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTR 57
           +FKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTR
Sbjct: 95  KFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTR 144
[Close]
BLAST of Spo02647.1 vs. NCBI nr
Match: gi|902153503|gb|KNA05704.1| (hypothetical protein SOVF_187860 [Spinacia oleracea])

HSP 1 Score: 63.9 bits (154), Expect = 2.200e-7
Identity = 32/40 (80.00%), Postives = 34/40 (85.00%), Query Frame = 1 

		  

Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           + EFKAVTKEICKLPSFFS VLFQKIDVNGT FVT  A +
Sbjct: 165 MNEFKAVTKEICKLPSFFSTVLFQKIDVNGTGFVTRDAFV 204
[Close]
BLAST of Spo02647.1 vs. NCBI nr
Match: gi|731366217|ref|XP_010694949.1| (PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 61.2 bits (147), Expect = 1.400e-6
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 1 

		  

Query: 7   EFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           EFKAVTKEICKLPSFFS VLFQKIDVN T F+T  A +
Sbjct: 168 EFKAVTKEICKLPSFFSTVLFQKIDVNSTGFITRDAFV 205
[Close]
BLAST of Spo02647.1 vs. NCBI nr
Match: gi|731366219|ref|XP_010694950.1| (PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 61.2 bits (147), Expect = 1.400e-6
Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 1 

		  

Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           + EFKAVTKEICKLPSFFS VLFQKIDVN T F+T  A +
Sbjct: 165 MNEFKAVTKEICKLPSFFSTVLFQKIDVNSTGFITRDAFV 204
[Close]
BLAST of Spo02647.1 vs. NCBI nr
Match: gi|743880858|ref|XP_011036317.1| (PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X2 [Populus euphratica])

HSP 1 Score: 59.7 bits (143), Expect = 4.200e-6
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 1 

		  

Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           I EFK+VTKE+CKLPSFFS VLF++IDVN T+FVT  A +
Sbjct: 164 IHEFKSVTKEVCKLPSFFSTVLFRRIDVNSTDFVTRDAFL 203
[Close]
BLAST of Spo02647.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R601_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_102760 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.000e-18
Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 1 

		  

Query: 7   EFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTR 57
           +FKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTR
Sbjct: 95  KFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTR 144
[Close]
BLAST of Spo02647.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEK5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_187860 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.500e-7
Identity = 32/40 (80.00%), Postives = 34/40 (85.00%), Query Frame = 1 

		  

Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           + EFKAVTKEICKLPSFFS VLFQKIDVNGT FVT  A +
Sbjct: 165 MNEFKAVTKEICKLPSFFSTVLFQKIDVNGTGFVTRDAFV 204
[Close]
BLAST of Spo02647.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E4I4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096520 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.000e-6
Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 1 

		  

Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           + EFKAVTKEICKLPSFFS VLFQKIDVN T F+T  A +
Sbjct: 165 MNEFKAVTKEICKLPSFFSTVLFQKIDVNSTGFITRDAFV 204
[Close]
BLAST of Spo02647.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BAW5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096520 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.000e-6
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 1 

		  

Query: 7   EFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           EFKAVTKEICKLPSFFS VLFQKIDVN T F+T  A +
Sbjct: 168 EFKAVTKEICKLPSFFSTVLFQKIDVNSTGFITRDAFV 205
[Close]
BLAST of Spo02647.1 vs. UniProtKB/TrEMBL
Match: B9IPA8_POPTR (Calcium-binding EF hand family protein OS=Populus trichocarpa GN=POPTR_0019s03640g PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.900e-6
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 1 

		  

Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           I EFK+VTKE+CKLPSFFS VLF++IDVN T+FVT  A +
Sbjct: 164 IHEFKSVTKEVCKLPSFFSTVLFRRIDVNSTDFVTRDAFL 203
[Close]
BLAST of Spo02647.1 vs. ExPASy Swiss-Prot
Match: 2AB2B_ARATH (Serine/threonine protein phosphatase 2A regulatory subunit B''beta OS=Arabidopsis thaliana GN=B''BETA PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.100e-6
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 1 

		  

Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           I EFK VT+EICKLPSFFS  LF+KID+N T FVT  A +
Sbjct: 161 IQEFKLVTREICKLPSFFSTSLFRKIDLNNTGFVTRDAFI 200
[Close]
BLAST of Spo02647.1 vs. ExPASy Swiss-Prot
Match: 2AB2C_ARATH (Probable serine/threonine protein phosphatase 2A regulatory subunit B''gamma OS=Arabidopsis thaliana GN=B''GAMMA PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.100e-6
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 1 

		  

Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           I EFK VT+EICKLPSFFS  LF+KID+N T FVT  A +
Sbjct: 161 IQEFKLVTREICKLPSFFSTSLFRKIDLNNTGFVTRDAFI 200
[Close]
BLAST of Spo02647.1 vs. ExPASy Swiss-Prot
Match: 2AB2A_ARATH (Serine/threonine protein phosphatase 2A regulatory subunit B''alpha OS=Arabidopsis thaliana GN=B''ALPHA PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.200e-6
Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 1 

		  

Query: 7   EFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMR 46
           EFK++TKE+CKLPSF S VLF+KID +GT  VT  A ++
Sbjct: 166 EFKSITKEVCKLPSFLSSVLFRKIDTSGTGIVTRDAFIK 204
[Close]
BLAST of Spo02647.1 vs. TAIR (Arabidopsis)
Match: AT5G28900.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 54.3 bits (129), Expect = 6.200e-8
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 1 

		  

Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           I EFK VT+EICKLPSFFS  LF+KID+N T FVT  A +
Sbjct: 161 IQEFKLVTREICKLPSFFSTSLFRKIDLNNTGFVTRDAFI 200
[Close]
BLAST of Spo02647.1 vs. TAIR (Arabidopsis)
Match: AT5G28850.2 (Calcium-binding EF-hand family protein)

HSP 1 Score: 54.3 bits (129), Expect = 6.200e-8
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 1 

		  

Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           I EFK VT+EICKLPSFFS  LF+KID+N T FVT  A +
Sbjct: 161 IQEFKLVTREICKLPSFFSTSLFRKIDLNNTGFVTRDAFI 200
[Close]
BLAST of Spo02647.1 vs. TAIR (Arabidopsis)
Match: AT5G44090.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 52.8 bits (125), Expect = 1.800e-7
Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 1 

		  

Query: 7   EFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMR 46
           EFK++TKE+CKLPSF S VLF+KID +GT  VT  A ++
Sbjct: 166 EFKSITKEVCKLPSFLSSVLFRKIDTSGTGIVTRDAFIK 204
[Close]
BLAST of Spo02647.1 vs. TAIR (Arabidopsis)
Match: AT1G03960.1 (Calcium-binding EF hand family protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.500e-6
Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 1 

		  

Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMR 46
           + EFK++TK++CKLPSF S  LF+KID N T+ VT  A ++
Sbjct: 155 VDEFKSITKQVCKLPSFLSPALFRKIDPNCTDIVTRDAFIK 195
[Close]
BLAST of Spo02647.1 vs. TAIR (Arabidopsis)
Match: AT1G54450.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 47.8 bits (112), Expect = 5.800e-6
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 1 

		  

Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFV 39
           + EFK VT EICK+PSFFS  +F+K+D N T FV
Sbjct: 161 LQEFKLVTTEICKVPSFFSTSIFKKVDTNNTGFV 194
The following BLAST results are available for this feature:
BLAST of Spo02647.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902204654|gb|KNA14936.1|2.8e-1898.0hypothetical protein SOVF_1027... [more]
gi|902153503|gb|KNA05704.1|2.2e-780.0hypothetical protein SOVF_1878... [more]
gi|731366217|ref|XP_010694949.1|1.4e-678.9PREDICTED: serine/threonine pr... [more]
gi|731366219|ref|XP_010694950.1|1.4e-675.0PREDICTED: serine/threonine pr... [more]
gi|743880858|ref|XP_011036317.1|4.2e-670.0PREDICTED: serine/threonine pr... [more]
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BLAST of Spo02647.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R601_SPIOL2.0e-1898.0Uncharacterized protein OS=Spi... [more]
A0A0K9QEK5_SPIOL1.5e-780.0Uncharacterized protein OS=Spi... [more]
A0A0J8E4I4_BETVU1.0e-675.0Uncharacterized protein OS=Bet... [more]
A0A0J8BAW5_BETVU1.0e-678.9Uncharacterized protein OS=Bet... [more]
B9IPA8_POPTR2.9e-670.0Calcium-binding EF hand family... [more]
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BLAST of Spo02647.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
2AB2B_ARATH1.1e-667.5Serine/threonine protein phosp... [more]
2AB2C_ARATH1.1e-667.5Probable serine/threonine prot... [more]
2AB2A_ARATH3.2e-661.5Serine/threonine protein phosp... [more]
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BLAST of Spo02647.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G28900.16.2e-867.5Calcium-binding EF-hand family... [more]
AT5G28850.26.2e-867.5Calcium-binding EF-hand family... [more]
AT5G44090.11.8e-761.5Calcium-binding EF-hand family... [more]
AT1G03960.11.5e-653.6Calcium-binding EF hand family... [more]
AT1G54450.15.8e-661.7Calcium-binding EF-hand family... [more]
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:1900140 regulation of seedling development
biological_process GO:0010817 regulation of hormone levels
biological_process GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0048767 root hair elongation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0010224 response to UV-B
biological_process GO:0002237 response to molecule of bacterial origin
biological_process GO:0016567 protein ubiquitination
biological_process GO:0048657 anther wall tapetum cell differentiation
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0009742 brassinosteroid mediated signaling pathway
biological_process GO:0009932 cell tip growth
biological_process GO:0071555 cell wall organization
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009729 detection of brassinosteroid stimulus
biological_process GO:0048366 leaf development
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0060548 negative regulation of cell death
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0010584 pollen exine formation
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0009911 positive regulation of flower development
biological_process GO:0019748 secondary metabolic process
biological_process GO:0006546 glycine catabolic process
biological_process GO:0006486 protein glycosylation
biological_process GO:0006325 chromatin organization
biological_process GO:0008152 metabolic process
biological_process GO:0006075 (1->3)-beta-D-glucan biosynthetic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0009249 protein lipoylation
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0009107 lipoate biosynthetic process
biological_process GO:0009965 leaf morphogenesis
cellular_component GO:0000148 1,3-beta-D-glucan synthase complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0010008 endosome membrane
cellular_component GO:0032991 protein-containing complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005759 mitochondrial matrix
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0005496 steroid binding
molecular_function GO:0004714 transmembrane receptor protein tyrosine kinase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0051213 dioxygenase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0015079 potassium ion transmembrane transporter activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016992 lipoate synthase activity
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0003843 1,3-beta-D-glucan synthase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0005525 GTP binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo018400.75Barchart | Table
Spo049850.75Barchart | Table
Spo154200.75Barchart | Table
Spo177790.75Barchart | Table
Spo235070.74Barchart | Table
Spo126230.73Barchart | Table
Spo028180.73Barchart | Table
Spo270040.73Barchart | Table
Spo018410.73Barchart | Table
Spo237510.73Barchart | Table
Spo228180.72Barchart | Table
Spo268060.72Barchart | Table
Spo119180.72Barchart | Table
Spo242940.72Barchart | Table
Spo055570.72Barchart | Table
Spo100970.72Barchart | Table
Spo106730.72Barchart | Table
Spo211320.72Barchart | Table
Spo268330.72Barchart | Table
Spo021150.72Barchart | Table
Spo173860.72Barchart | Table
Spo170320.72Barchart | Table
Spo112430.71Barchart | Table
Spo022540.71Barchart | Table
Spo247130.71Barchart | Table
Spo214310.71Barchart | Table
Spo196820.71Barchart | Table
Spo228940.71Barchart | Table
Spo164210.71Barchart | Table
Spo011840.71Barchart | Table
Spo049990.71Barchart | Table
Spo059280.71Barchart | Table
Spo031970.71Barchart | Table
Spo112960.71Barchart | Table
Spo142750.70Barchart | Table
Spo184510.70Barchart | Table
Spo186910.70Barchart | Table
Spo121550.70Barchart | Table
Spo113840.70Barchart | Table
Spo173290.70Barchart | Table
Spo236110.70Barchart | Table
Spo208580.70Barchart | Table
Spo064650.70Barchart | Table
Spo175490.70Barchart | Table
Spo100210.70Barchart | Table
Spo247060.70Barchart | Table
Spo069620.70Barchart | Table
Spo119190.70Barchart | Table
Spo085310.70Barchart | Table
Spo104270.70Barchart | Table
Spo267060.70Barchart | Table
Spo109660.70Barchart | Table
Spo051270.70Barchart | Table
Spo179590.70Barchart | Table
Spo048850.70Barchart | Table
Spo217290.69Barchart | Table
Spo035900.69Barchart | Table
Spo209090.69Barchart | Table
Spo236640.69Barchart | Table
Spo229700.69Barchart | Table
Spo048650.69Barchart | Table
Spo003970.69Barchart | Table
Spo060180.69Barchart | Table
Spo060410.69Barchart | Table
Spo071840.69Barchart | Table
Spo071990.69Barchart | Table
Spo099490.69Barchart | Table
Spo099930.69Barchart | Table
Spo106610.69Barchart | Table
Spo245490.69Barchart | Table
Spo023450.69Barchart | Table
Spo027310.69Barchart | Table
Spo154100.69Barchart | Table
Spo154240.69Barchart | Table
Spo172110.69Barchart | Table
Spo172200.69Barchart | Table
Spo240180.69Barchart | Table
Spo178220.69Barchart | Table
Spo185420.69Barchart | Table
Spo087720.68Barchart | Table
Spo266460.68Barchart | Table
Spo267680.68Barchart | Table
Spo013970.68Barchart | Table
Spo199650.68Barchart | Table
Spo204970.68Barchart | Table
Spo187760.68Barchart | Table
Spo158650.68Barchart | Table
Spo006940.68Barchart | Table
Spo229060.68Barchart | Table
Spo036620.68Barchart | Table
Spo195580.68Barchart | Table
Spo223860.68Barchart | Table
Spo173400.68Barchart | Table
Spo031960.68Barchart | Table
Spo093510.68Barchart | Table
Spo099400.68Barchart | Table
Spo091200.68Barchart | Table
Spo104210.68Barchart | Table
Spo261900.68Barchart | Table
Spo237710.68Barchart | Table
Spo106710.68Barchart | Table
Spo006440.67Barchart | Table
Spo004860.67Barchart | Table
Spo240660.67Barchart | Table
Spo167590.67Barchart | Table
Spo207040.67Barchart | Table
Spo110690.67Barchart | Table
Spo085460.67Barchart | Table
Spo075860.67Barchart | Table
Spo074410.67Barchart | Table
Spo206390.67Barchart | Table
Spo117440.67Barchart | Table
Spo245660.67Barchart | Table
Spo190890.67Barchart | Table
Spo214650.67Barchart | Table
Spo024440.67Barchart | Table
Spo056270.67Barchart | Table
Spo130870.67Barchart | Table
Spo172250.67Barchart | Table
Spo013850.67Barchart | Table
Spo054050.67Barchart | Table
Spo208260.67Barchart | Table
Spo233460.67Barchart | Table
Spo093500.67Barchart | Table
Spo092140.67Barchart | Table
Spo031850.67Barchart | Table
Spo174980.66Barchart | Table
Spo013560.66Barchart | Table
Spo021070.66Barchart | Table
Spo032850.66Barchart | Table
Spo041790.66Barchart | Table
Spo044480.66Barchart | Table
Spo051920.66Barchart | Table
Spo054870.66Barchart | Table
Spo056660.66Barchart | Table
Spo059550.66Barchart | Table
Spo067480.66Barchart | Table
Spo088500.66Barchart | Table
Spo089630.66Barchart | Table
Spo089990.66Barchart | Table
Spo091230.66Barchart | Table
Spo116800.66Barchart | Table
Spo123640.66Barchart | Table
Spo140990.66Barchart | Table
Spo148260.66Barchart | Table
Spo159110.66Barchart | Table
Spo200110.66Barchart | Table
Spo200450.66Barchart | Table
Spo202420.66Barchart | Table
Spo209000.66Barchart | Table
Spo227480.66Barchart | Table
Spo230960.66Barchart | Table
Spo240920.66Barchart | Table
Spo244560.66Barchart | Table
Spo258790.66Barchart | Table
Spo259170.66Barchart | Table
Spo200830.65Barchart | Table
Spo197130.65Barchart | Table
Spo002360.65Barchart | Table
Spo166870.65Barchart | Table
Spo071780.65Barchart | Table
Spo162180.65Barchart | Table
Spo243690.65Barchart | Table
Spo069050.65Barchart | Table
Spo109940.65Barchart | Table
Spo106580.65Barchart | Table
Spo102220.65Barchart | Table
Spo092190.65Barchart | Table
Spo252920.65Barchart | Table
Spo258510.65Barchart | Table
Spo066730.65Barchart | Table
Spo022800.65Barchart | Table
Spo088510.65Barchart | Table
Spo265600.65Barchart | Table
Spo074260.65Barchart | Table
Spo072910.65Barchart | Table
Spo225290.65Barchart | Table
Spo236080.65Barchart | Table
Spo217840.65Barchart | Table
Spo216500.65Barchart | Table