Spo02556 (gene) | SpinachBase

Overview


Name	Spo02556
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	CCT motif family protein
Location	chr3 : 5439354 .. 5448064 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAACAAAGGTAATGAGGAGACTTGTGCAGCATATGGGAAGAATGATCATAACAAAGAAAAATGCTGGTCAGTTGTGGGATTCCCAAGTTGGCACCCTAGAGGTCAGAAAGATCAATATCAGAAAGGCAGAAATAGAGACTTTGGGAACAATTCAAGAGGAGGAAGATGGAATAGAGGCAGAAATGGAAGGGGTGGTGGAAGAACTGCAGCTAATGCTCAAGGGCATGCAAGTTCAAGCTCCAGTTCTAACACAAACAACACTTTCACCACTCAACAACTTGCAGAACTCATGAAGTTGCTCCCAACTCCTTCTAAAGCAAGCAATATTTCAGATTCAGAAGAAGATATGGACACAAATTATGCTGGTATGGTGAGCTGTCACTATGCAGATAGCATAAGAACATAATGGATCATTGACTCCGGTGCTTCAGATCACATGACAAGATCATTTGTCATGATCAAAGATGCAGAGAAAAGTAAAAATAAACAAAAAACCAACCTAGAATGAAACAAAGTCACTGCTAAGCTAATAAGCAGATGACATCAAGGCAAAATAAAACGGCTACATAGTATAGAATCACATGTTCTAATTAGGAGCTGCTGAGTTGGCTTAGGAGCACACCAAATTTCACCTACTACCATGTATACTGTCCTCAATAAACAATTACATGTTCAAATCTATACTATTATTAAATCTCAATGGCATTTCATGCCATCTCGCCACATGTCGCCGTCATTAGATGACAAGTGACATCACTGACATGGCATAGCCACATTGACATACATGTCGCCCCCATTAGATGACAAGTGACATGACATAGCCACTTTGACATATAATATTGTCTTACAAAAAGATGAAGAAATGCAAATATCAATGCTTGAAGCCATGACTTCATGTTCATAAGTTAGAACTTTAACTACTAATCTAATAATATAACTTATGATATTTAAGCAATCGAAAACATATAAGTTATATGTTTATTAATACATTGTACTAATTCTTTAATGCCTACCATAATTATACATTTTAATAATTTACATTTTCATTTAGGTTCATTTATAATTACGTTTTTTAGCAAGCCAGTTCATGTAAGTTTACCTAGAGCAATAAAAAAAGAGTATTACACATGACAAAAGACTATTCCATTTTAAATTTAAATTTAGTTTACTAAGATGTTTAACCAAATTTTATATTGAATCACCCTTACATAAATAAAATATAAAAATAAATTATGCACAAATATTTATCTCATGTTATATGTAAGTATTTAATATCAAACTATTGTAATTATTTTTATTTAACTCAAATTTTATCAAGATTAGTTCTCAAATTATATATAGTCACCGGGGCATCGCTCGGGGCAATAGCTAGTTTCTTTTTCTATTTATATAGAGTAATTGGTATTTATGTATATATAAATACTAAATTAGGTCCCATACATGTACGAGTATTCAAAACTTATTATTTGACAATGACTTTAAAGAAAATATTTAATTGAAATATTTATCCTCTAAAGCTGATATATAATTAATAAATCTTAACTTATTTAATCATTTACTATGCAATTTCTGTCCCGTATTACATAATTTATATGCTTAATATGATAACTTAACCAAAATAGTCGACATGCTTAATATTCTAATTTGACCAAAATATTGAGTAAAAATGAATTTTTGTTATTGATATGTTGTTTTGACTAAAATTTTACCAACATCATCTATCATTATTATACTCTATATCCGATATTTTTTTTCCATATATAAATTGTTTATAAAAAGGGGGAGAAAATAAAATAAAATAAAGTAATGTGTTTTTCTTTTCTTCAGGAAAGAGGTTTCTTGGCGAGAATATTTTGTACCAGAAAATTACATATGTTATTCATGATGTCTGATTTAATATAAAGTAATAGATGGATTATAATGTTATACTAAGTATAGAAACATTAACTATTATTTAAAACAATATTTGACATATATTTATGAATCGTGTAACTGTGATAACACTAACAGGGTCGTATATGTATTTTATAAGGAAACACTAAAAAGTCAACCTCATGTATTCGTTTAAAATAGAGATTTTTTTATTATTCTTATGGCTCACTTGCTGGGAAAAAAACAAAAACAATTGGGCATTACTCGCCGTCCCTTAATACACGTTCCACTTTCTTATAAAGTCGTCCTTAATACTCGCCCCGTTTCCATAAATAGCTTATGTTTATAAATATTACATCATTTATCCCACTTAATCATTGACACACATATATTTCTACTTCCTAAAAAATCATTAAAAAATTGAAATACCCCTATCCCATCTCGATGAAGTCATATATGATATGTATTGAAAATGCATATCACAACAAAAGACAAAATAGGAAAAAGACAAAAATTAAATAAATTGTTGTTAACTTTTTTTTGGAAACTAATATTTTATGTTTACTTTATGCATGAGATTAATTATGAATACGAAAAATTGAAAAAATGTTACTTTTTTTCTAAAAAAAATGATTTTTTTAAAATGGTACTTTCTCTCCCCACTTGTTCACTTTCTCTCTCTACTGCCGTCTACTTTTCTCTCTATTTTTTTCATTCTCTCTCTGCTTTTTTCCCCCCCTCTTTCTCTCTTATTGTTCTCCTCAAGTGGTCGTGTTTTGTCATTTAGTGTTTTGTCTTTATCTATTACAATTTTTCTTTTTTTGTCATGTTATGAAGTGTGTTTTGGCATGTTGTGGGGTGATTTGTGTGGTGATATCCGCCTCTCCAACCTCACCCCACCTCCACCCCTACTTTGTTTGACACATTTCTCATCAACTATATTAAAAAAAATACCATACTACCTAATAAATTAACTAGTCAATTAAATTGTTTAAAACTCTATGCCGGTCGAATCGGATCGGATATTAAGGAACGGATGTAGTACAATTTAATCATGACATAATTACGACATTAACCCCAATCAAATTTTTGCCTATAAGGTAATAGGGACTAGACTAGATGTTAACAACTTTGTCTTCATGATATATTGGACTACATTCACTTCTAGAAACTAAGGTACCCTCAATAATAGGGCAAGTTACATCAAACTTTTTTTTTTTTTTTTGGGGTGGGGGGGGGGGGGGGGGGTTTACATTAACATTAGTATATGTAGAGAAAGCTAAATTTTTGAGTATGTTTCAATTAGTTGCTCCGTATTTAACAACATTAACCGTTATAGGAAATAAGAGAAACTATTTGATGTATGTGGAGGATAACTTTCGTTAGAGAATAATATTTAGTTAAACTCCGTATAGTCTTACACACACAAGATTGTACAAGTTCATCTAGAAATATGTACATTTATATTTTCTAACATACCTAAAGTTCTGATAAGCTAAGTAAATCATGTACATAGAGTACATGTGATCAAATAACTATATATCCTATTCAATCAGTTAATGAAGAAGAGAATATCAATAATCATACTCAATACTTGATAACATGAGTTACATGACAAATTAATTTGAGGATGTAAATTTTCTTATTTATCATAGTTGAGATTGCATTGAGTTACTTGAAAAGTGAATAGCCGAAATCTTTTACCTTTTCCATCATTTTAACTTTGAAGTATCAATCTACTTTGAAAAGTATAACATTACATTGTTTTTAGCTATGATATATAAACTAATAATCTAGAAGATTTAACACAAATTAGAATAAACAATATGATCTTCACCTTCTATATTCACAACAGTTGATCTAAAAAATGGATCATCCAATTCATCTAAAAATGAAAAGGATGTTCAACTTGTTTTGATTTTTGTCGTTAACTATTCACAACCATTGATCTAAATAAAAAAATGAACCATCCAATTTTTCATAACCATAAAATCAATAAAAAAACTTTATTTAATTCAATTTATTATGTACCTTATATTTGTTAGATTTATATTTCACTTATAAATTTCATATGATTCTTTTTTATTCGTGAATTATTTTACATAAAAGGATCCCCACTCGAGTGAGAGACATACCCATTAAAATCAACTAGGAAGAAAAAGAGAAAAAGGGAAATTCCAAAACATTGGGGGCTGATGTAACAACAATCAAAATGATAAAATAAAGGAAGAGGCATTATTTATAAATTTTTATCATTAAAAAATTGAAAAAAAGGGGGGACATGTTTGACAGTGCACAATAATATTGATGATATTATTATTGTCCTTTATGCCGTTGTCCTTATTGTGTACTGTTCATATTGAAAAGCAAAACCAAAATGTCTTAGTTTATTTTACTTTATTTTAATTTTAAAATTTTGTTTTTTCATTTTTCTCCTATAATTAATTTACAACCCCACTTCCCAATTTCCATACAATTTGTGGGAGTAAAATTTTCTTGTATAAATTCTCTCTCCTCTTCTCTATGACTCTATCCCCACCAGCCTAGAAGAAGGAACCATCCCATTTCAGATTCTCTTTTAAGGCTGCTGCTCTTCTGTTCTTCTTTACTCCTGCCACTCACTCTTTTTTCTCCAACTGATTTTCTGCAAAAAAGTTATCATTTTCAGGAAAAAATGTATGCAGAAACAGGTTTAATGTATCCATATTTCCAGAATTTCTCTCATGAAATTCATCCATTAGAGGAGCTTTGTTGTTACTCTCAAGAACCCACTTCTTCACTGGTAAAAACTTCTATCTTTTTTGTTCATTTATACTAATTTCTGTTTATTGTTCTAATCTTTTTGGGTTTTGGGTATGTAATGTTGAAATGGGTATCTGGGTGTTTCTTTTTGGATTACTCAATTTGGTGATATATTTTTTTTTTTGAGTACTCAATTTGGTGAAATGGGTATCTGGGTTATACACTAATTACTTAAAGTTCCAATTTTTTTTTTTGGGTTTTAGGCATGTAATGGTGAAAAGGGTATCTGGGTTTTTAAGTTCTGATTACAAGTTTGGATCTTTTTACTGGGTTAATGTTAAATCATGAATGCTTTGAACTTCTTTTTGTTTGATTTTGACCACATTTATTAAGTCTTTTAAACAGTGCTTAATCTGTGCTTAAACTTGATTAAGAAAATGATTAAATATTTTTTGGGGATTTTGGGTGTATGTCTTGTCATTTGATTGATGCATGGTTTTTTATTACTTGATTTGAGTTATTAGTAATTGATTTGATGGCTCTGATTTTATGTTAAATTTGGAATCAATGGAGGTGTTTGAAGTTTCTATATAAAAAAAAATCAAGAGTAGAGAAGTCTGAGTGATTTCATAGTCATAGCTTGCGTGTGCTTTATTCTCTTTTCCATTAAAAGGTTTTGATCAGAATTGCTTTTTCAATCCACTAAAACAATGACAAAGACTCAAAGAAACTCTGGAGGTGATAACTAGAAGTGAGAGATGTCTTAAATGTTCATATGGAGTTTTCTGGTTTTGTGAGTTAGCTAAATTTGGGAATTTTTTTATTTTAGAAAATAACCCTTTTTTTAAAGCTTGAAGTTGATCTTTGTTGTACTGGGTATAAAAATTGGTGTTTTTTTGAGGTAAAGCATTATTCTTCGTTTGTAATTTACAGCATTTTCGGCCGAAAACGGGTTGATTCTCTTAGTTACTTCTCAAAAATGTGAATTGGTATAATGTGGAAAACTTGGACAAAGTGGAAGCTAAAGCTAAATACTTGTTGGTACTAATGGTTTAAAGTTAAGTATGTAGGAGTTTGTGTTTGTATAAAGTAGGGTTTCCCTTTTGCAGTTCATAGAAGTGACTGAATATCTTAACTTCTGCTTAGCTTTCTTAGATATATCATCAAGTTGCACTATTGGAAATGCTTTAGCAGTTTAGCTCTTACCTTATGATGTTTATCACCATCGAGTTCTTTGAGTTAACGCGGATTATATGCTTGTGTTAAAGCAGTGAATAAGTATAGGTTTCTGATTCAGCCAATCAAAAGCTGGTTTAGAGGGAAAATTTGGATTCAAGTTCTATGTTGTACTAATAAACTTAATAGCTGGTTTTGTTAAAGAACTACTTGTATATTAATTAGCCTAGGGCCTTGTAACATTCTGTTGAAGACATGTACTCTCAGATTAATTATTAAGACTGTCATACTGTGTGGTTGAGATATTTCTTAAATGAAAATACAAGTACAACCACATGCTTTCCACACAAGTTGGAGAGCCTATCATAGTTTCTGTCACTGTAATGGTGCCCAGCAAAAGAACTTTCGTGTTATGTGGCCTGCTAACTAAGGGCGCGTTCGGTATCATTTTTTGTTTCTAGTTTTATGTTTTTACAAACTAAAAACCAAAATATGAAGACCACAAAAAGTAGTTTTCAGTTTTTTGTTGTCAGTTTTCAAAATCAACATGATTACTATAAGTATGCTTATTTTTTAGTTCATGATTCAATCTAAATCATATGATGTACTACACAAAAAAACCAAAATCTGGAAACTGATGGTTAATTATTTCAGAGATGACGTGACCGTAATTGTTTCTGTTTTTTTTTAACTAATTCAGGATAGCATCATCACAAGCTCTACCATTTCAGACTATGACTTGGGAGGTGAAGGGGACCTCTTCAAAGCACCCGAACCCATAATTGAAGAGCCAATCGGGAGCCTCGATCCCATGTCAGCGGCTATTGCGATGATATCTTCTGTGGAAGATTCAGGCCTCAAAGTTAGTGACATGGAATCCCTGCAAAATGAGCAGTTTTTGTGTGATGTTTTCGACGGTTGTGAGAATGAACTGTTGGCGAAAACTACATCAGGAGAATCAACTGTCTCTGATGTTATGGACATCAAGTTTCCTCTCATGATGACAAATGAAGTCCAGACTGAAGAAAACAAACCGGTTCCCGCTTTGCCGTTTCCAAAATGTGGTAGCTCGGGTTCCTTAAACTCAATGGAATGGGTAAGTAGCACAACAATCAGGCCGAATTTCTTAGATTTTCCTGAAATGGATTTTGGAGCTGCTTATGGGATGAGGAGGGCGTTCAGTGAAGGAGATATAAAGGTTAGGTTGAGAAGTCTTCAGCATTATCTTGCTTTGCTTTACCTGTAATATCAGGATCCTCTATTGGACAATCTGTTGAATCATATGTGAAATTGTGAACAAGATATATCTTTCACAATTTGTTTGTCTGATTAGTATGCTTTCTTTGAAGTTAGTTTAAGAAAGAACATGCTAGATGTTGTGTTGTGGTGAATCATGTTCAGTACTGAATATCGAGCAACGAGCATTTACAAGCTATCAGACTGTTTAGAAACCGAGAAATGTTTAGATGTTTGTCATCAATTTCCATAGGAAATGGGGCTAGGTATTGATTCTCGGTTTTTATGACAGGCTCTCGCGAATGGAAACGTTAGTCTCGTCCAATCTACTCTCCAGCGGCCACTTCTGATTGGCAATTGCACCTCTGAAGATCGCCTGCAGAAGCTTTCTAGATACAGAAACAAGAGATCAAGGAGGAACTTTGGCCGGAAAATCAAGGTAAAAACATTTTTGACCATTCACTTGTTTCTATAGGTGATCGTTGGCTGGCTTAAGGTGATGTTTGGTTGGCATGAAAAACCATAGGAAGTATTACTTTCTAGGAAGTGGAAGATTACAGTATCGTTTGGTTGACAAAACATGAGAAGTCACACTTCCTGCAATATTGAGGAAGTTAAGTGGAACTTCCCATGTTTAACCAAACAATATCACACACTTCTTAGGAAATGCTTATACACGTGAAAAGCTTTTTCCTAGGAAGTTCTACTTCCCACGATCAACCAAACGACCCCTTAGATTTACTTCCTACTTTTGAGGATGTCTCGGAATATAGTCTTATACAGTATGTATGCTTCAGTATGCTTGCAGGAAGGCACTAGCTGACAGTCAGCCAAGGATCCGCGGAAGATTTGCAAAGACTGAAGATGCTGATTCCAAGAAGTAAATGAGTAAAAATCAACAACAGATCTTAACGAGCAAATGTAGGAAAGAACATAGAGATAGACTTTGGGAAAAAATAACGGTCTTAGAATCCCGGTAGTGGTCTAAAGGCATAGCATCTATCAAGTACTCAGTATATGATACAACACCCCATATATCAGGGTTTTGCCTAATAACTGTAAGACCACTAACCCTTGAAGAAAAAAAAAAGAAGGAAAAAGTACTTAGGTAATTCTCTTAATTGCTGTGATAAAAGTTTCTTTTCTAGTTTTAGCATAATTAGCTGCTTAGCTTAGAGTTGTAAATAGGGAATGAAATAAGGTTTTATGATGCTAATACCCTGTTGCTATCAGCGTCGCGTGTAACGGTAAAAAATGAAAATGTCTGTTGTTACTGTTAGCTTTGTGTACTGGTTTTTCTCTTTTGCTGCATTTTTGAAGTCCCAAAACAATATATCTTTGTACAACACAGGGGTACAAGAATGGGGCTAAGTTAGGTGTATGTTTGTTATTGAAAAATTGACAGGAGCAATTTGGAATCTTAGCTTGATACCTCAGCAAGATGGGAGGTATTTGGCTAGGTTATAATATGTACAAATAGAGCAGACAAAAGTTTACATTTGGTTGAGACAAGTCAAGTGGGTCACTTGATGTTTTGTTTTTCCAATAATTAGTGGTGAATGATAATACAAATTGAAAATGTTTTCCGTTGAAACAAACGGAGCCCTAGCACGGACCAGGACGAAAAATAGTTTCTTTTGCTGTTGGGTGGAGTATGTGCTGAATGTAACAGAAACAAAC

mRNA sequence

ATGTACAACAAAGGTAATGAGGAGACTTGTGCAGCATATGGGAAGAATGATCATAACAAAGAAAAATGCTGGTCAGTTGTGGGATTCCCAAGTTGGCACCCTAGAGGTCAGAAAGATCAATATCAGAAAGGCAGAAATAGAGACTTTGGGAACAATTCAAGAGGAGGAAGATGGAATAGAGGCAGAAATGGAAGGGGTGGTGGAAGAACTGCAGCTAATGCTCAAGGGCATGCAAGTTCAAGCTCCAGTTCTAACACAAACAACACTTTCACCACTCAACAACTTGCAGAACTCATGAAGTTGCTCCCAACTCCTTCTAAAGCAAGCAATATTTCAGATTCAGAAGAAGATATGGACACAAATTATGCTGGTATGGAAAAAATGTATGCAGAAACAGGTTTAATGTATCCATATTTCCAGAATTTCTCTCATGAAATTCATCCATTAGAGGAGCTTTGTTGTTACTCTCAAGAACCCACTTCTTCACTGGATAGCATCATCACAAGCTCTACCATTTCAGACTATGACTTGGGAGGTGAAGGGGACCTCTTCAAAGCACCCGAACCCATAATTGAAGAGCCAATCGGGAGCCTCGATCCCATGTCAGCGGCTATTGCGATGATATCTTCTGTGGAAGATTCAGGCCTCAAAGTTAGTGACATGGAATCCCTGCAAAATGAGCAGTTTTTGTGTGATGTTTTCGACGGTTGTGAGAATGAACTGTTGGCGAAAACTACATCAGGAGAATCAACTGTCTCTGATGTTATGGACATCAAGTTTCCTCTCATGATGACAAATGAAGTCCAGACTGAAGAAAACAAACCGGTTCCCGCTTTGCCGTTTCCAAAATGTGGTAGCTCGGGTTCCTTAAACTCAATGGAATGGGTAAGTAGCACAACAATCAGGCCGAATTTCTTAGATTTTCCTGAAATGGATTTTGGAGCTGCTTATGGGATGAGGAGGGCGTTCAGTGAAGGAGATATAAAGGCTCTCGCGAATGGAAACGTTAGTCTCGTCCAATCTACTCTCCAGCGGCCACTTCTGATTGGCAATTGCACCTCTGAAGATCGCCTGCAGAAGCTTTCTAGATACAGAAACAAGAGATCAAGGAGGAACTTTGGCCGGAAAATCAAGTATGCTTGCAGGAAGGCACTAGCTGACAGTCAGCCAAGGATCCGCGGAAGATTTGCAAAGACTGAAGATGCTGATTCCAAGAAGTAAATGAGTAAAAATCAACAACAGATCTTAACGAGCAAATGTAGGAAAGAACATAGAGATAGACTTTGGGAAAAAATAACGGTCTTAGAATCCCGGTAGTGGTCTAAAGGCATAGCATCTATCAAGTACTCAGTATATGATACAACACCCCATATATCAGGGTTTTGCCTAATAACTGTAAGACCACTAACCCTTGAAGAAAAAAAAAAGAAGGAAAAAGTACTTAGGTAATTCTCTTAATTGCTGTGATAAAAGTTTCTTTTCTAGTTTTAGCATAATTAGCTGCTTAGCTTAGAGTTGTAAATAGGGAATGAAATAAGGTTTTATGATGCTAATACCCTGTTGCTATCAGCGTCGCGTGTAACGGTAAAAAATGAAAATGTCTGTTGTTACTGTTAGCTTTGTGTACTGGTTTTTCTCTTTTGCTGCATTTTTGAAGTCCCAAAACAATATATCTTTGTACAACACAGGGGTACAAGAATGGGGCTAAGTTAGGTGTATGTTTGTTATTGAAAAATTGACAGGAGCAATTTGGAATCTTAGCTTGATACCTCAGCAAGATGGGAGGTATTTGGCTAGGTTATAATATGTACAAATAGAGCAGACAAAAGTTTACATTTGGTTGAGACAAGTCAAGTGGGTCACTTGATGTTTTGTTTTTCCAATAATTAGTGGTGAATGATAATACAAATTGAAAATGTTTTCCGTTGAAACAAACGGAGCCCTAGCACGGACCAGGACGAAAAATAGTTTCTTTTGCTGTTGGGTGGAGTATGTGCTGAATGTAACAGAAACAAAC

Coding sequence (CDS)

ATGTACAACAAAGGTAATGAGGAGACTTGTGCAGCATATGGGAAGAATGATCATAACAAAGAAAAATGCTGGTCAGTTGTGGGATTCCCAAGTTGGCACCCTAGAGGTCAGAAAGATCAATATCAGAAAGGCAGAAATAGAGACTTTGGGAACAATTCAAGAGGAGGAAGATGGAATAGAGGCAGAAATGGAAGGGGTGGTGGAAGAACTGCAGCTAATGCTCAAGGGCATGCAAGTTCAAGCTCCAGTTCTAACACAAACAACACTTTCACCACTCAACAACTTGCAGAACTCATGAAGTTGCTCCCAACTCCTTCTAAAGCAAGCAATATTTCAGATTCAGAAGAAGATATGGACACAAATTATGCTGGTATGGAAAAAATGTATGCAGAAACAGGTTTAATGTATCCATATTTCCAGAATTTCTCTCATGAAATTCATCCATTAGAGGAGCTTTGTTGTTACTCTCAAGAACCCACTTCTTCACTGGATAGCATCATCACAAGCTCTACCATTTCAGACTATGACTTGGGAGGTGAAGGGGACCTCTTCAAAGCACCCGAACCCATAATTGAAGAGCCAATCGGGAGCCTCGATCCCATGTCAGCGGCTATTGCGATGATATCTTCTGTGGAAGATTCAGGCCTCAAAGTTAGTGACATGGAATCCCTGCAAAATGAGCAGTTTTTGTGTGATGTTTTCGACGGTTGTGAGAATGAACTGTTGGCGAAAACTACATCAGGAGAATCAACTGTCTCTGATGTTATGGACATCAAGTTTCCTCTCATGATGACAAATGAAGTCCAGACTGAAGAAAACAAACCGGTTCCCGCTTTGCCGTTTCCAAAATGTGGTAGCTCGGGTTCCTTAAACTCAATGGAATGGGTAAGTAGCACAACAATCAGGCCGAATTTCTTAGATTTTCCTGAAATGGATTTTGGAGCTGCTTATGGGATGAGGAGGGCGTTCAGTGAAGGAGATATAAAGGCTCTCGCGAATGGAAACGTTAGTCTCGTCCAATCTACTCTCCAGCGGCCACTTCTGATTGGCAATTGCACCTCTGAAGATCGCCTGCAGAAGCTTTCTAGATACAGAAACAAGAGATCAAGGAGGAACTTTGGCCGGAAAATCAAGTATGCTTGCAGGAAGGCACTAGCTGACAGTCAGCCAAGGATCCGCGGAAGATTTGCAAAGACTGAAGATGCTGATTCCAAGAAGTAA

Protein sequence

MYNKGNEETCAAYGKNDHNKEKCWSVVGFPSWHPRGQKDQYQKGRNRDFGNNSRGGRWNRGRNGRGGGRTAANAQGHASSSSSSNTNNTFTTQQLAELMKLLPTPSKASNISDSEEDMDTNYAGMEKMYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAPEPIIEEPIGSLDPMSAAIAMISSVEDSGLKVSDMESLQNEQFLCDVFDGCENELLAKTTSGESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRPNFLDFPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSRYRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo02556.1	Spo02556.1	mRNA

Homology

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BLAST of Spo02556.1 vs. NCBI nr
Match: gi|902212778|gb|KNA17082.1| (hypothetical protein SOVF_081890 [Spinacia oleracea])

HSP 1 Score: 553.1 bits (1424), Expect = 4.000e-154
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1


		  
Query: 128 MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP 187
           MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP
Sbjct: 1   MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP 60

Query: 188 EPIIEEPIGSLDPMSAAIAMISSVEDSGLKVSDMESLQNEQFLCDVFDGCENELLAKTTS 247
           EPIIEEPIGSLDPMSAAIAMISSVEDSGLKVSDMESLQNEQFLCDVFDGCENELLAKTTS
Sbjct: 61  EPIIEEPIGSLDPMSAAIAMISSVEDSGLKVSDMESLQNEQFLCDVFDGCENELLAKTTS 120

Query: 248 GESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRPNFLD 307
           GESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRPNFLD
Sbjct: 121 GESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRPNFLD 180

Query: 308 FPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSRYRNK 367
           FPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSRYRNK
Sbjct: 181 FPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSRYRNK 240

Query: 368 RSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK 407
           RSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK
Sbjct: 241 RSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK 279

[Close]

BLAST of Spo02556.1 vs. NCBI nr
Match: gi|731321644|ref|XP_010671464.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 7 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 462.6 bits (1189), Expect = 7.000e-127
Identity = 237/283 (83.75%), Postives = 256/283 (90.46%), Query Frame = 1


		  
Query: 128 MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP 187
           MYAETGL+YPYFQNF  E+ PLEELCCYSQEPTSSLDSIIT+STISDYDLGGEGDLFKAP
Sbjct: 1   MYAETGLLYPYFQNFCQEVQPLEELCCYSQEPTSSLDSIITTSTISDYDLGGEGDLFKAP 60

Query: 188 EPIIEEPIGSLDPMSAAIAMISSVED----SGLKVSDMESLQNEQFLCDVFDGCENELLA 247
           EPIIEEPIGSLDPM+  IAMI+ V++    SGL+V+DMESLQNEQ LCDVFDGCENEL  
Sbjct: 61  EPIIEEPIGSLDPMT--IAMITCVDNGMPTSGLEVADMESLQNEQLLCDVFDGCENELFE 120

Query: 248 KTTSGESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRP 307
           KT S E++V DV+DIK PLMMTNEVQTEENK +P LPF KCGSSGSLNSMEWVSS T+RP
Sbjct: 121 KT-SVETSVCDVLDIKVPLMMTNEVQTEENKSLPDLPFSKCGSSGSLNSMEWVSSATMRP 180

Query: 308 NFLDFPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSR 367
           NFLDFPEMDFGAAYGMRRAFSEGDIK LA+GN+SL+ S LQRPL IGNCTSE+RLQKLSR
Sbjct: 181 NFLDFPEMDFGAAYGMRRAFSEGDIKTLASGNISLMHSPLQRPLQIGNCTSEERLQKLSR 240

Query: 368 YRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK 407
           YRNK+SRRNFGRKIKYACRKALADSQPRIRGRFAKTED DS K
Sbjct: 241 YRNKKSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDTDSCK 280

[Close]

BLAST of Spo02556.1 vs. NCBI nr
Match: gi|870864966|gb|KMT16033.1| (hypothetical protein BVRB_3g052070 isoform B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 435.6 bits (1119), Expect = 9.200e-119
Identity = 228/283 (80.57%), Postives = 244/283 (86.22%), Query Frame = 1


		  
Query: 128 MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP 187
           MYAETGL+YPYFQNF  E+ PLEELCCYSQEPTSSLDSIIT+STISDYDLGGEGDLFKAP
Sbjct: 1   MYAETGLLYPYFQNFCQEVQPLEELCCYSQEPTSSLDSIITTSTISDYDLGGEGDLFKAP 60

Query: 188 EPIIEEPIGSLDPMSAAIAMISSVED----SGLKVSDMESLQNEQFLCDVFDGCENELLA 247
           EPIIEEPIGSLDPM+  IAMI+ V++    SGL+V+DMESLQNEQ LCDVFDGCENEL  
Sbjct: 61  EPIIEEPIGSLDPMT--IAMITCVDNGMPTSGLEVADMESLQNEQLLCDVFDGCENELFE 120

Query: 248 KTTSGESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRP 307
           KT S E++V DV+DIK PLMMTNEVQTEENK +P LPF KCGSSGSLNSMEWVSS T+RP
Sbjct: 121 KT-SVETSVCDVLDIKVPLMMTNEVQTEENKSLPDLPFSKCGSSGSLNSMEWVSSATMRP 180

Query: 308 NFLDFPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSR 367
           NFLDFPEMDFGAAYGMRRAFSEGDIK               RPL IGNCTSE+RLQKLSR
Sbjct: 181 NFLDFPEMDFGAAYGMRRAFSEGDIK---------------RPLQIGNCTSEERLQKLSR 240

Query: 368 YRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK 407
           YRNK+SRRNFGRKIKYACRKALADSQPRIRGRFAKTED DS K
Sbjct: 241 YRNKKSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDTDSCK 265

[Close]

BLAST of Spo02556.1 vs. NCBI nr
Match: gi|802765889|ref|XP_012090072.1| (PREDICTED: uncharacterized protein LOC105648332 isoform X1 [Jatropha curcas])

HSP 1 Score: 342.0 bits (876), Expect = 1.400e-90
Identity = 174/283 (61.48%), Postives = 216/283 (76.33%), Query Frame = 1


		  
Query: 128 MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP 187
           MYA+TGL+ PY QNFS +   LEE C Y Q   +S+ +I  +STIS+YDLGGEGDLFKAP
Sbjct: 1   MYADTGLLLPYMQNFSQDFQQLEEFCKY-QRTNASMRNIFPTSTISEYDLGGEGDLFKAP 60

Query: 188 EPIIEEPIGSLDPMSAAIAMISS----VEDSGLKVSDMESLQNEQFLCDVFDGCENELLA 247
           EPIIEE I  LDPM+AAI+MIS     +   GLKV+D+ES+Q EQFL +VF  C  +L+ 
Sbjct: 61  EPIIEESIVGLDPMTAAISMISCGDEVISSQGLKVADIESIQTEQFLSEVFYECRKDLME 120

Query: 248 KTTSGESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRP 307
           K    E+ +++++DIK P+M  +E Q +ENK +P +P PK  SSG L+SMEWV    ++P
Sbjct: 121 KAAI-ETPLAEILDIKIPVMRADENQIQENKVLPDVPLPKSVSSGCLSSMEWVHGAAVKP 180

Query: 308 NFLDFPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSR 367
           NFLDF  +D G  YGMRRA+SEGDIK L NGN+SL+ STL RPL I +CT+EDR +KLSR
Sbjct: 181 NFLDFSGVDLGTVYGMRRAYSEGDIKTLGNGNISLIHSTLDRPLTISSCTTEDRKEKLSR 240

Query: 368 YRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK 407
           YRNK+++RNFGRKIKYACRKALADSQPRIRGRFAKTED+D  K
Sbjct: 241 YRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEDSDISK 281

[Close]

BLAST of Spo02556.1 vs. NCBI nr
Match: gi|568848516|ref|XP_006478054.1| (PREDICTED: uncharacterized protein LOC102616889 isoform X1 [Citrus sinensis])

HSP 1 Score: 340.1 bits (871), Expect = 5.300e-90
Identity = 174/283 (61.48%), Postives = 224/283 (79.15%), Query Frame = 1


		  
Query: 128 MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP 187
           MYAETGL++PY QNFS +   LEE C  S +P SS+ +I+ +STISDYDLGGEGDLFKAP
Sbjct: 1   MYAETGLIFPYMQNFSQDFQLLEEYC-KSNKPNSSMSNIVATSTISDYDLGGEGDLFKAP 60

Query: 188 EPIIEEPIGSLDPMSAAIAMISSVED----SGLKVSDMESLQNEQFLCDVFDGCENELLA 247
           EPIIEE +GSLDP++AAI+MIS  ED     GLKV+++ES+ NEQ L +VF   + +L+ 
Sbjct: 61  EPIIEETLGSLDPVTAAISMISCGEDVITSQGLKVTNIESIHNEQLLSEVFYDWDKDLME 120

Query: 248 KTTSGESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRP 307
           K    ++++S+V+DIK P+ MT+E Q +ENK VP +PF K  SSG L SMEWV  T ++P
Sbjct: 121 KAVM-DASLSEVLDIKIPIAMTDENQNQENKLVPDVPFQKSVSSGCLTSMEWVHGTAMQP 180

Query: 308 NFLDFPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSR 367
           +FL+   MDFG+ YGMRRAFS+GDIK L NGN+SL+QS L++PL+I +  +EDR +KLSR
Sbjct: 181 SFLELTGMDFGSVYGMRRAFSDGDIKTLGNGNMSLIQSPLEQPLMISSSATEDRREKLSR 240

Query: 368 YRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK 407
           YRNK+++RNFGR+IKYACRKALADSQPRIRGRFAKTE++D  K
Sbjct: 241 YRNKKTKRNFGRRIKYACRKALADSQPRIRGRFAKTEESDVSK 281

[Close]

BLAST of Spo02556.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RE12_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_081890 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 2.800e-154
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1


		  
Query: 128 MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP 187
           MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP
Sbjct: 1   MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP 60

Query: 188 EPIIEEPIGSLDPMSAAIAMISSVEDSGLKVSDMESLQNEQFLCDVFDGCENELLAKTTS 247
           EPIIEEPIGSLDPMSAAIAMISSVEDSGLKVSDMESLQNEQFLCDVFDGCENELLAKTTS
Sbjct: 61  EPIIEEPIGSLDPMSAAIAMISSVEDSGLKVSDMESLQNEQFLCDVFDGCENELLAKTTS 120

Query: 248 GESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRPNFLD 307
           GESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRPNFLD
Sbjct: 121 GESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRPNFLD 180

Query: 308 FPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSRYRNK 367
           FPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSRYRNK
Sbjct: 181 FPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSRYRNK 240

Query: 368 RSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK 407
           RSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK
Sbjct: 241 RSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK 279

[Close]

BLAST of Spo02556.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CR38_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g052070 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 4.900e-127
Identity = 237/283 (83.75%), Postives = 256/283 (90.46%), Query Frame = 1


		  
Query: 128 MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP 187
           MYAETGL+YPYFQNF  E+ PLEELCCYSQEPTSSLDSIIT+STISDYDLGGEGDLFKAP
Sbjct: 1   MYAETGLLYPYFQNFCQEVQPLEELCCYSQEPTSSLDSIITTSTISDYDLGGEGDLFKAP 60

Query: 188 EPIIEEPIGSLDPMSAAIAMISSVED----SGLKVSDMESLQNEQFLCDVFDGCENELLA 247
           EPIIEEPIGSLDPM+  IAMI+ V++    SGL+V+DMESLQNEQ LCDVFDGCENEL  
Sbjct: 61  EPIIEEPIGSLDPMT--IAMITCVDNGMPTSGLEVADMESLQNEQLLCDVFDGCENELFE 120

Query: 248 KTTSGESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRP 307
           KT S E++V DV+DIK PLMMTNEVQTEENK +P LPF KCGSSGSLNSMEWVSS T+RP
Sbjct: 121 KT-SVETSVCDVLDIKVPLMMTNEVQTEENKSLPDLPFSKCGSSGSLNSMEWVSSATMRP 180

Query: 308 NFLDFPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSR 367
           NFLDFPEMDFGAAYGMRRAFSEGDIK LA+GN+SL+ S LQRPL IGNCTSE+RLQKLSR
Sbjct: 181 NFLDFPEMDFGAAYGMRRAFSEGDIKTLASGNISLMHSPLQRPLQIGNCTSEERLQKLSR 240

Query: 368 YRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK 407
           YRNK+SRRNFGRKIKYACRKALADSQPRIRGRFAKTED DS K
Sbjct: 241 YRNKKSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDTDSCK 280

[Close]

BLAST of Spo02556.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVR2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g052070 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 6.400e-119
Identity = 228/283 (80.57%), Postives = 244/283 (86.22%), Query Frame = 1


		  
Query: 128 MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP 187
           MYAETGL+YPYFQNF  E+ PLEELCCYSQEPTSSLDSIIT+STISDYDLGGEGDLFKAP
Sbjct: 1   MYAETGLLYPYFQNFCQEVQPLEELCCYSQEPTSSLDSIITTSTISDYDLGGEGDLFKAP 60

Query: 188 EPIIEEPIGSLDPMSAAIAMISSVED----SGLKVSDMESLQNEQFLCDVFDGCENELLA 247
           EPIIEEPIGSLDPM+  IAMI+ V++    SGL+V+DMESLQNEQ LCDVFDGCENEL  
Sbjct: 61  EPIIEEPIGSLDPMT--IAMITCVDNGMPTSGLEVADMESLQNEQLLCDVFDGCENELFE 120

Query: 248 KTTSGESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRP 307
           KT S E++V DV+DIK PLMMTNEVQTEENK +P LPF KCGSSGSLNSMEWVSS T+RP
Sbjct: 121 KT-SVETSVCDVLDIKVPLMMTNEVQTEENKSLPDLPFSKCGSSGSLNSMEWVSSATMRP 180

Query: 308 NFLDFPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSR 367
           NFLDFPEMDFGAAYGMRRAFSEGDIK               RPL IGNCTSE+RLQKLSR
Sbjct: 181 NFLDFPEMDFGAAYGMRRAFSEGDIK---------------RPLQIGNCTSEERLQKLSR 240

Query: 368 YRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK 407
           YRNK+SRRNFGRKIKYACRKALADSQPRIRGRFAKTED DS K
Sbjct: 241 YRNKKSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDTDSCK 265

[Close]

BLAST of Spo02556.1 vs. UniProtKB/TrEMBL
Match: A0A067JQ78_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25976 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 9.700e-91
Identity = 174/283 (61.48%), Postives = 216/283 (76.33%), Query Frame = 1


		  
Query: 128 MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP 187
           MYA+TGL+ PY QNFS +   LEE C Y Q   +S+ +I  +STIS+YDLGGEGDLFKAP
Sbjct: 1   MYADTGLLLPYMQNFSQDFQQLEEFCKY-QRTNASMRNIFPTSTISEYDLGGEGDLFKAP 60

Query: 188 EPIIEEPIGSLDPMSAAIAMISS----VEDSGLKVSDMESLQNEQFLCDVFDGCENELLA 247
           EPIIEE I  LDPM+AAI+MIS     +   GLKV+D+ES+Q EQFL +VF  C  +L+ 
Sbjct: 61  EPIIEESIVGLDPMTAAISMISCGDEVISSQGLKVADIESIQTEQFLSEVFYECRKDLME 120

Query: 248 KTTSGESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRP 307
           K    E+ +++++DIK P+M  +E Q +ENK +P +P PK  SSG L+SMEWV    ++P
Sbjct: 121 KAAI-ETPLAEILDIKIPVMRADENQIQENKVLPDVPLPKSVSSGCLSSMEWVHGAAVKP 180

Query: 308 NFLDFPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSR 367
           NFLDF  +D G  YGMRRA+SEGDIK L NGN+SL+ STL RPL I +CT+EDR +KLSR
Sbjct: 181 NFLDFSGVDLGTVYGMRRAYSEGDIKTLGNGNISLIHSTLDRPLTISSCTTEDRKEKLSR 240

Query: 368 YRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK 407
           YRNK+++RNFGRKIKYACRKALADSQPRIRGRFAKTED+D  K
Sbjct: 241 YRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEDSDISK 281

[Close]

BLAST of Spo02556.1 vs. UniProtKB/TrEMBL
Match: A0A061G1S7_THECC (CCT motif family protein OS=Theobroma cacao GN=TCM_015399 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 4.500e-88
Identity = 169/283 (59.72%), Postives = 222/283 (78.45%), Query Frame = 1


		  
Query: 128 MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP 187
           MYAETGL +PY QNF  +    EE C  +Q+P +S+++++ +STIS+YDLGGEGDLFKAP
Sbjct: 1   MYAETGLFFPYMQNFCQDFQQFEEFC-KTQKPNASMNNLVQTSTISEYDLGGEGDLFKAP 60

Query: 188 EPIIEEPIGSLDPMSAAIAMISSVED----SGLKVSDMESLQNEQFLCDVFDGCENELLA 247
           EPIIEEPI  LDPM+AAI++IS  ED     GLK +D+ES+QNEQ L +V   CE +L+A
Sbjct: 61  EPIIEEPIVGLDPMTAAISLISCGEDVITSQGLKAADIESIQNEQLL-EVLYECEKDLMA 120

Query: 248 KTTSGESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRP 307
           +    E+ +SDV+DIK P++ T+E Q + NK +  +PF K  SSG L+SMEW+    I+P
Sbjct: 121 QAAI-ETPLSDVLDIKIPVVKTDENQNQGNKLLCDVPFQKSVSSGCLSSMEWMQGAAIKP 180

Query: 308 NFLDFPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSR 367
           +FLDF  MDFG+ YGMRRAFSEGDIK L NGN +++ S L+RPL++ +C++EDR +KLSR
Sbjct: 181 SFLDFSGMDFGSVYGMRRAFSEGDIKTLGNGNTTVIHSPLERPLIVSSCSTEDRREKLSR 240

Query: 368 YRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTEDADSKK 407
           YRNK+++RNFGRKIKYACRKALADSQPRIRGRFA+TE++D+ K
Sbjct: 241 YRNKKTKRNFGRKIKYACRKALADSQPRIRGRFARTEESDNSK 280

[Close]

BLAST of Spo02556.1 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 4.700e-6
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 1


		  
Query: 333 NGNVSLVQSTLQRPLLIGN--CTSEDRLQKLSRYRNKRSRRNFGRKIKYACRKALADSQP 392
           N N S+ +ST+      G+   +S DR  ++ RYR KR  R F + I+YA RKA A+S+P
Sbjct: 259 NTNNSVNRSTITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRP 318

Query: 393 RIRGRFAKTEDADS 405
           RI+GRFAK  + ++
Sbjct: 319 RIKGRFAKRTETEN 332

[Close]

BLAST of Spo02556.1 vs. TAIR (Arabidopsis)
Match: AT5G53420.1 (CCT motif family protein)

HSP 1 Score: 226.5 bits (576), Expect = 3.000e-59
Identity = 139/278 (50.00%), Postives = 185/278 (66.55%), Query Frame = 1


		  
Query: 128 MYAETGLMYPYFQNFSHEIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKAP 187
           MY ++GLM  Y QN   +I   E+L    +      ++ + SS IS+YD+G E DLF+AP
Sbjct: 1   MYQDSGLMLRYMQNCPPDIQQFEDLFKSYKLSDEMNNTFVESSNISEYDIGEESDLFRAP 60

Query: 188 EPIIEEPIGSLDPMSAAIAMISSVEDSG---LKVSDMESLQNEQFLCD-VFDGCENELLA 247
           +PI+EEPI ++DP+SAA+ MIS  ED+     ++ D+ SLQ+ Q L D  F  CE +L+ 
Sbjct: 61  DPILEEPILTVDPLSAALTMISCGEDTSQGLCELPDLGSLQSGQQLLDKAFYECEQDLMM 120

Query: 248 KTTSGESTVSDVMDIKFPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVSSTTIRP 307
           K+   ES  SDV+DIK   ++T   + ++ +        K  SSG+L+SM+W  +     
Sbjct: 121 KSAM-ESPFSDVLDIKNISVVTTINENQDMQ--------KSVSSGNLSSMDWSHAQQETV 180

Query: 308 NFLDFPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKLSR 367
              +FP+ DFG  YGMRRAFSEGDI+ L  G   LVQS L R  +I +CTSEDR +KLSR
Sbjct: 181 MIQNFPDFDFG--YGMRRAFSEGDIQKLGAG---LVQSPLDR--IIVSCTSEDRREKLSR 240

Query: 368 YRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTED 402
           Y+NK+SRRNFGRKIKYACRKALADSQPR+RGRFAKTE+
Sbjct: 241 YKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEE 262

[Close]

BLAST of Spo02556.1 vs. TAIR (Arabidopsis)
Match: AT4G27900.1 (CCT motif family protein)

HSP 1 Score: 218.8 bits (556), Expect = 6.200e-57
Identity = 140/280 (50.00%), Postives = 186/280 (66.43%), Query Frame = 1


		  
Query: 128 MYAETGLMYPYFQNFSH-EIHPLEELCCYSQEPTSSLDSIITSSTISDYDLGGEGDLFKA 187
           MYAET L + + Q+ S  EIH  E+L   S + +  +++++ +S   +YD G E DLFKA
Sbjct: 1   MYAETSLAFRFMQSSSSPEIHQFEDLF-KSYKLSDEMNNLVEAS---EYDFGEESDLFKA 60

Query: 188 PEPIIEEPIGSLDPMSAAIAMISSVEDSGLKVSDMESLQNEQFLCD-VFDGCENELLAKT 247
           PEPIIEEP+ ++DP+S  +          +++ D+ SLQ++Q L D  F  CE +LL K+
Sbjct: 61  PEPIIEEPMLAVDPLSQEL----------VELGDLGSLQSDQQLIDKAFYDCEQDLLVKS 120

Query: 248 TSGESTVSDVMDIK---FPLMMTNEVQTEENKPVPALPFPKCGSSGSLNSMEWVS-STTI 307
              ES +S+V+DIK       M N+V++  +  V  +P PK  SSG+L+SM+ V     +
Sbjct: 121 AM-ESPLSEVLDIKNISLVAKMDNDVKST-SVVVSDVPIPKSVSSGNLSSMDMVEHKDAV 180

Query: 308 RPNFLDFPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTLQRPLLIGNCTSEDRLQKL 367
              F DFP +D    YGMRRAFSE DI+ L  GN  LVQS L R  +I +CTSEDR +KL
Sbjct: 181 IQGFPDFPPVD----YGMRRAFSESDIQTLGTGNTGLVQSQLDR--IIISCTSEDRREKL 240

Query: 368 SRYRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTED 402
           SRYRNK+S+RNFGRKIKYACRKALADSQPRIRGRFAKTE+
Sbjct: 241 SRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEE 258

[Close]

BLAST of Spo02556.1 vs. TAIR (Arabidopsis)
Match: AT1G63820.1 (CCT motif family protein)

HSP 1 Score: 80.5 bits (197), Expect = 2.700e-15
Identity = 48/120 (40.00%), Postives = 73/120 (60.83%), Query Frame = 1


		  
Query: 297 SSTTIRPNFLDFPEMDFGAAYGMRRAFSEGDIKAL---------------ANGNVSLVQS 356
           SS     N L+ PE  F + + MRR +S GD++ L               A  + + V S
Sbjct: 118 SSNFQNQNLLNSPEDSFFSDH-MRRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFS 177

Query: 357 TLQRPLLIGNCTSEDRLQKLSRYRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTED 402
             ++ L +G  +SE+R +K+S+YR KR++RNF + IKYACRK LAD++PR+RGRFA+ ++
Sbjct: 178 GDEQSLRVGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDE 236

[Close]

BLAST of Spo02556.1 vs. TAIR (Arabidopsis)
Match: AT5G41380.1 (CCT motif family protein)

HSP 1 Score: 80.1 bits (196), Expect = 3.500e-15
Identity = 46/110 (41.82%), Postives = 71/110 (64.55%), Query Frame = 1


		  
Query: 296 VSSTTIRPNFLDFPEMDFGAAYGMRRAFSEGDIKALANGNVSLVQSTL----QRPLLIGN 355
           + S+ +  N L  PE  F ++  MRR +S GD++       S   ST+    ++   +G 
Sbjct: 151 MDSSNLSYNNLSSPENAFFSSQ-MRRVYSTGDLQNNMEMQRSSENSTMPFSEEQNFKVGR 210

Query: 356 CTSEDRLQKLSRYRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTED 402
            ++E+R +K+S+YR KR++RNF + IKYACRK LADS+PRIRGRFA+ ++
Sbjct: 211 YSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFARNDE 259

[Close]

BLAST of Spo02556.1 vs. TAIR (Arabidopsis)
Match: AT1G04500.1 (CCT motif family protein)

HSP 1 Score: 69.3 bits (168), Expect = 6.100e-12
Identity = 31/53 (58.49%), Postives = 42/53 (79.25%), Query Frame = 1


		  
Query: 349 IGNCTSEDRLQKLSRYRNKRSRRNFGRKIKYACRKALADSQPRIRGRFAKTED 402
           +G  ++E R +K+ RY  KR+ RNF +KIKYACRK LADS+PR+RGRFAK ++
Sbjct: 280 VGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDE 332

The following BLAST results are available for this feature:

BLAST of Spo02556.1 vs. NCBI nr
BLAST of Spo02556.1 vs. UniProtKB/TrEMBL
BLAST of Spo02556.1 vs. ExPASy Swiss-Prot
BLAST of Spo02556.1 vs. TAIR (Arabidopsis)

BLAST of Spo02556.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902212778\|gb\|KNA17082.1\|	4.0e-154	100.	hypothetical protein SOVF_0818...	[more]
gi\|731321644\|ref\|XP_010671464.1\|	7.0e-127	83.7	PREDICTED: zinc finger protein...	[more]
gi\|870864966\|gb\|KMT16033.1\|	9.2e-119	80.5	hypothetical protein BVRB_3g05...	[more]
gi\|802765889\|ref\|XP_012090072.1\|	1.4e-90	61.4	PREDICTED: uncharacterized pro...	[more]
gi\|568848516\|ref\|XP_006478054.1\|	5.3e-90	61.4	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo02556.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RE12_SPIOL	2.8e-154	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CR38_BETVU	4.9e-127	83.7	Uncharacterized protein OS=Bet...	[more]
A0A0J8CVR2_BETVU	6.4e-119	80.5	Uncharacterized protein OS=Bet...	[more]
A0A067JQ78_JATCU	9.7e-91	61.4	Uncharacterized protein OS=Jat...	[more]
A0A061G1S7_THECC	4.5e-88	59.7	CCT motif family protein OS=Th...	[more]

BLAST of Spo02556.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
COL5_ARATH	4.7e-6	43.2	Zinc finger protein CONSTANS-L...	[more]

BLAST of Spo02556.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G53420.1	3.0e-59	50.0	CCT motif family protein	[more]
AT4G27900.1	6.2e-57	50.0	CCT motif family protein	[more]
AT1G63820.1	2.7e-15	40.0	CCT motif family protein	[more]
AT5G41380.1	3.5e-15	41.8	CCT motif family protein	[more]
AT1G04500.1	6.1e-12	58.4	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 357..399 score: 1.1
IPR010402	CCT domain	PROFILE	PS51017	CCT	coord: 357..399 score: 14
None	No IPR available	PANTHER	PTHR31717	FAMILY NOT NAMED	coord: 110..406 score: 3.4E
None	No IPR available	PANTHER	PTHR31717:SF2	CCT MOTIF FAMILY PROTEIN	coord: 110..406 score: 3.4E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0071805	potassium ion transmembrane transport
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005267	potassium channel activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo08991	0.76	Barchart \| Table
Spo17038	0.74	Barchart \| Table
Spo00383	0.74	Barchart \| Table
Spo18075	0.72	Barchart \| Table
Spo26703	0.71	Barchart \| Table
Spo23626	0.71	Barchart \| Table
Spo27247	0.70	Barchart \| Table
Spo01065	0.70	Barchart \| Table
Spo03907	0.70	Barchart \| Table
Spo11569	0.69	Barchart \| Table
Spo11960	0.68	Barchart \| Table
Spo04406	0.68	Barchart \| Table
Spo06865	0.67	Barchart \| Table
Spo09378	0.67	Barchart \| Table
Spo20222	0.67	Barchart \| Table
Spo25588	0.67	Barchart \| Table
Spo09717	0.66	Barchart \| Table
Spo04471	0.66	Barchart \| Table
Spo02746	0.66	Barchart \| Table
Spo23547	0.66	Barchart \| Table
Spo02893	0.66	Barchart \| Table
Spo24133	0.66	Barchart \| Table
Spo02443	0.66	Barchart \| Table
Spo25796	0.66	Barchart \| Table
Spo10086	0.66	Barchart \| Table
Spo04772	0.65	Barchart \| Table