Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCAACCCTTTGTCGCTTTCCCTTTCCCTTTCCCTTTTTAATTCAGCACTCCTGTCCTGTCCTTCATACACATACGGGTATACCCTCTTCTCAAAACAAAACCCAGAAAACAACAAAGATGGCCGGAAAATCGCCGGAGTTATCGCCGGAAAACGAATGGATGAATCTGTTGAAGAACTTGGAAAGTTCCCAGATTGCACAAGTCTTCGATGGGGTTTGCTCAGATTGTCAATCTCTTCTTAAATCTCGTCTTCTCTCCCTCTCTAACCGTGAGATTACTTCCTTCTTTTTTTCAATAATTTTAAATTCTTAATTAAGTTGCTTTAATGGGTGTTCTATTGAGTGTGGCTGGAAATTCAATTTGAGCTTTTTAAGTTTTTGTTTTGATTTTTCTGGAGTCGGGATTGTGCAACTTTTCTTTTGTGGTGTTAAAGGATGTAAATTTATTAGTTATTTCTAGCTGATTAGAGTATCGAATAATAAGAAAAGATTGAATCTTTGGAAATAGTTCCTCGGATTTGGTTTGGTTGTCACGTTACTAGTTTATTTATACTATTGACTTGACAATTAATTACAGACGGAGGGAGTACTATTGGGAAAAATAACAACTTTAAGCCTAATCGTTATGTACAGATGTTTAGTAATTGAAGTGAATTTATGTCTTTGATTTTGAAATAATCAACATTAACAATATTGCAATGTGTATAAAGAGAGTAGCGAAAGGAAGGATCGGATGAATGCAATCTTACCCTTGTTCTGTAATTACTGATATGTTTCTTTTAATAATGGGCTAATTGACTCTTACTATGTTAAGCAATTGTTTGATTTCATGAAATTTTGTTATGTTAATGATTGATTTAAGAGGAATCTGATATAATATCCTGAATAAATATATTTGTGATTTGTAATATGCAGATAATACTGTCAGAAAAACTATCGAAATGAGTTCATCGAATTCCTGTTCTTCTGAAACAAGTACACCATCTTCATATATTGACAATAACCAACAACAAAATAGCAACAATGTAGGAACTCCTCGAAGCAAAGAATCTGTCCGCTCAGAAAGGAATACTAATTATGAATCGCCCTCACCAGTTAACGCGAAGCCACAGTTGCGTGATCTTTTCAGTAACCATGGCTTATCTCCTAGTAATGGGAACCATACGCCTTCACCTACTACTACTGCTAATGGATCATCAGACGAGGAGGAGTGGAACCGGTTTTCACAGGTGAAAAGGAAGAAGGATTTTGTGCATTATGAGAGAGTTGATGGGAGAAAGGTCAATGTGGTTCAAGGATTGGAGCTTCATACTGGAGTTTTCAGTGCTGAAGAACAGAAAAAGATTGTTGAATCTGTTTACAACTTCCAGAAAATGGGAAGAAAAGGGCAGCTTATGGGTATGTTTTGTGAATCTCTTGCATCTTTTATTTCTTGTTTGGTACCTTTTGGTTTCCTTGTTTTCTGCTTAGATTATGCATTGAATTGTTGCTAGTAGGTTTGTGATCAAAATATTATTTTTGTAATTGTTCAAAAAGAAATTAAACAAAAGGTAGGGTAAGGCTAGGAAATAATGAAACGGGATTTACTTAGTTCGATCAATGTAAACATCATGAATTGTCCCTTATGAAACCGACTGCTGGCTTGTTCTTGTTGTATGTTCGGCTCCTTTGGTAGGGTATAGAACGTTTTCATGGAAAACGATTTTCCCCTTTTCAATCATTTTACGTTGTTTGGTTTGGGAAGGGATGAAAACAATTTGCCATAACTCCCTCAAAGGGGGGGGGGGGGCTTTTCCATTTGAAAGGGAGGGAAACCATTTTCCACCTTTCGTCCTTGCCTCCCTCTCCTTCTTCCTCTCAATCTTCACCATCTTCTCCAATTTTCTTTTAAGGAACCAACCAAAAGAAAACTAGTTTGAAATTGTGTTTTCGCTTGAAAAATGTTTTCCATGGAAAATCATTTTGCACTGAAAACATTTTACATTAAACCAAATGGAGTCATACTCTGAGTCTCTGACTCTCTATCTCACTGGCCTCATGTTGGTTTACGTGCTGGTTGTCCTAATTCCTCGTTTGGTTTGCATATCTGCAGAACGCACTTACTCTGAACCATTGAAGTGGATGCGTGGGAAAGGGCGTGTTACCATGCAATTTGGTTGTTGTTACAATTATGCAGTGGTAATTTTTGAATCCCTTTTTCTTATTAGCATTCTCTTTTGTGTATTCTGAATTTGTGATCACTTCAATTCAAACAACTCATGCCTTATGCTACGGATTTCTAATGTGTTTTCAGGACAAGGATGGAAATCCTCCGGGAATAGTCAGGGATGAGGAAGTTGATCCATTGCCTCCCCTATTTAAACAGATGATTAGCAGGATGGTGAAGTGGCATGTATTGCCTCCTACATGCGTTCCCAATAGTTGCATAGTGAATATTTATGATGAAGGCGATTGTATCCCTCCTCACATCGATCACCATGACTTTCTTCGTCCATTTTGTACTGTCTCTTTCTTGGCGGAGTGTAATATCCTCTTTGGTTCAAGTCTCAAAATCTTAAGCCCCGGAGAGTTTGCTGGTCCTGTCTCCATTCCTCTTCCTATTGGGTACGCCTCGTATTCCTTGTTTGGTTCGGTTTTTAATTCTTTTCACTGGTAGTGTAATTGAGATAACTCAATTTTATCACATAGTGTTCTGAACTCTGATCATCCACCTGCATAGGACTTAGAGTAATGTACTACTTCTGCCCCGTATTAGTTGAAAACTCCGATCATCTATTCTGTAGTACTTACAGTAATGTACTACCTCTTCCCCGTATTAGTTGAAAACTCCGTTCATCAATTCTGTAGTACTTATATTTAGATCTGGTTATTGGACAGGGTTCTTATTGGATAGGGTTCTTATTGGATAGGGCTCTTATTGGACAGGGCCTTTATTGGACAGGGTCAATATAGTTCCAAACTTCTAACCACAATAGTTTTGAAAACTAAAGTAGTTATGATATTAAAAAAAATATATGGACTTCTTATTCACTTGTATTCGCATACGATTTTTTTTTTTTCCATTTTTCCTTTGACCTCCCCACTTTCGGCCCGCTATTGACCCGCCCGCTACTGATCCGCTAAAATTGACCCTTTCATTACCCGACCCGCTTTTGGCCCACACCGACCCTGACCCGACCAATAACCAGGTCTACTTACATTCATTAGATATCGTTCAACTTGGATAATTGCGGTGCTTAATCAGCAGTCCTTAACATTCAAAACTTGTTTATGCTGCAGATCTGTTCTTGTTCTGAAAGGTAATGGAGCGGATGTTGCTAAACACTGTGTTCCTGCTGTCCCAGCAAAACGGTTAGTCAGTCTGATACTCTATATCCTCGAAACATCATTCAACATTACTAAATTCAATTTAAATGTTTGTTCTTTCTGTTTCTTGTGTACATTTTTTATGACATTGTTTATGATCTTGCTTTTTTCCAGGATTTCAGTCACATTTAGGAGGATGGATGATAGCAAAATCCCATACCAATTCTCTCCTGAACCTGATTTGCTGAACTTAAAGCCTCTTGTTCGGTCTCCGTTGCCCAAAGTAGGCGCCGCACACCAAAATCAACATCAACAAAGTGTAATTAATGGCAGAGCAAATAAATCAGATTCACAAGAAACAATCATTAATTCAAATGCAAGAGTGTTAGCCAATAACTCGTTCGTCCTCCAAACAGACGAATTCCCCACACTAGGTGCCTTGAAATCGAGGAAACGTTGAATCAGTTTATCATCCATGGACGAGTGAGGGGATTCTCCCTTCAAAGATCGCGGTTTCTCTTCTATATATTGCAAGTGTTAGTTGTACTATTTGTCCATTTATGTGCCAATCATTGTTTCATACTCAATTCACTTTGTATTTCTCCTAATTTTTCTTCTTCTATAGAGTAATAATTTGATCATTTTTAGTTAGAAATATTTTTATGTAACATTAT CGCAACCCTTTGTCGCTTTCCCTTTCCCTTTCCCTTTTTAATTCAGCACTCCTGTCCTGTCCTTCATACACATACGGGTATACCCTCTTCTCAAAACAAAACCCAGAAAACAACAAAGATGGCCGGAAAATCGCCGGAGTTATCGCCGGAAAACGAATGGATGAATCTGTTGAAGAACTTGGAAAGTTCCCAGATTGCACAAGTCTTCGATGGGGTTTGCTCAGATTGTCAATCTCTTCTTAAATCTCGTCTTCTCTCCCTCTCTAACCATAATACTGTCAGAAAAACTATCGAAATGAGTTCATCGAATTCCTGTTCTTCTGAAACAAGTACACCATCTTCATATATTGACAATAACCAACAACAAAATAGCAACAATGTAGGAACTCCTCGAAGCAAAGAATCTGTCCGCTCAGAAAGGAATACTAATTATGAATCGCCCTCACCAGTTAACGCGAAGCCACAGTTGCGTGATCTTTTCAGTAACCATGGCTTATCTCCTAGTAATGGGAACCATACGCCTTCACCTACTACTACTGCTAATGGATCATCAGACGAGGAGGAGTGGAACCGGTTTTCACAGGTGAAAAGGAAGAAGGATTTTGTGCATTATGAGAGAGTTGATGGGAGAAAGGTCAATGTGGTTCAAGGATTGGAGCTTCATACTGGAGTTTTCAGTGCTGAAGAACAGAAAAAGATTGTTGAATCTGTTTACAACTTCCAGAAAATGGGAAGAAAAGGGCAGCTTATGGAACGCACTTACTCTGAACCATTGAAGTGGATGCGTGGGAAAGGGCGTGTTACCATGCAATTTGGTTGTTGTTACAATTATGCAGTGGACAAGGATGGAAATCCTCCGGGAATAGTCAGGGATGAGGAAGTTGATCCATTGCCTCCCCTATTTAAACAGATGATTAGCAGGATGGTGAAGTGGCATGTATTGCCTCCTACATGCGTTCCCAATAGTTGCATAGTGAATATTTATGATGAAGGCGATTGTATCCCTCCTCACATCGATCACCATGACTTTCTTCGTCCATTTTGTACTGTCTCTTTCTTGGCGGAGTGTAATATCCTCTTTGGTTCAAGTCTCAAAATCTTAAGCCCCGGAGAGTTTGCTGGTCCTGTCTCCATTCCTCTTCCTATTGGATCTGTTCTTGTTCTGAAAGGTAATGGAGCGGATGTTGCTAAACACTGTGTTCCTGCTGTCCCAGCAAAACGGATTTCAGTCACATTTAGGAGGATGGATGATAGCAAAATCCCATACCAATTCTCTCCTGAACCTGATTTGCTGAACTTAAAGCCTCTTGTTCGGTCTCCGTTGCCCAAAGTAGGCGCCGCACACCAAAATCAACATCAACAAAGTGTAATTAATGGCAGAGCAAATAAATCAGATTCACAAGAAACAATCATTAATTCAAATGCAAGAGTGTTAGCCAATAACTCGTTCGTCCTCCAAACAGACGAATTCCCCACACTAGGTGCCTTGAAATCGAGGAAACGTTGAATCAGTTTATCATCCATGGACGAGTGAGGGGATTCTCCCTTCAAAGATCGCGGTTTCTCTTCTATATATTGCAAGTGTTAGTTGTACTATTTGTCCATTTATGTGCCAATCATTGTTTCATACTCAATTCACTTTGTATTTCTCCTAATTTTTCTTCTTCTATAGAGTAATAATTTGATCATTTTTAGTTAGAAATATTTTTATGTAACATTAT ATGGCCGGAAAATCGCCGGAGTTATCGCCGGAAAACGAATGGATGAATCTGTTGAAGAACTTGGAAAGTTCCCAGATTGCACAAGTCTTCGATGGGGTTTGCTCAGATTGTCAATCTCTTCTTAAATCTCGTCTTCTCTCCCTCTCTAACCATAATACTGTCAGAAAAACTATCGAAATGAGTTCATCGAATTCCTGTTCTTCTGAAACAAGTACACCATCTTCATATATTGACAATAACCAACAACAAAATAGCAACAATGTAGGAACTCCTCGAAGCAAAGAATCTGTCCGCTCAGAAAGGAATACTAATTATGAATCGCCCTCACCAGTTAACGCGAAGCCACAGTTGCGTGATCTTTTCAGTAACCATGGCTTATCTCCTAGTAATGGGAACCATACGCCTTCACCTACTACTACTGCTAATGGATCATCAGACGAGGAGGAGTGGAACCGGTTTTCACAGGTGAAAAGGAAGAAGGATTTTGTGCATTATGAGAGAGTTGATGGGAGAAAGGTCAATGTGGTTCAAGGATTGGAGCTTCATACTGGAGTTTTCAGTGCTGAAGAACAGAAAAAGATTGTTGAATCTGTTTACAACTTCCAGAAAATGGGAAGAAAAGGGCAGCTTATGGAACGCACTTACTCTGAACCATTGAAGTGGATGCGTGGGAAAGGGCGTGTTACCATGCAATTTGGTTGTTGTTACAATTATGCAGTGGACAAGGATGGAAATCCTCCGGGAATAGTCAGGGATGAGGAAGTTGATCCATTGCCTCCCCTATTTAAACAGATGATTAGCAGGATGGTGAAGTGGCATGTATTGCCTCCTACATGCGTTCCCAATAGTTGCATAGTGAATATTTATGATGAAGGCGATTGTATCCCTCCTCACATCGATCACCATGACTTTCTTCGTCCATTTTGTACTGTCTCTTTCTTGGCGGAGTGTAATATCCTCTTTGGTTCAAGTCTCAAAATCTTAAGCCCCGGAGAGTTTGCTGGTCCTGTCTCCATTCCTCTTCCTATTGGATCTGTTCTTGTTCTGAAAGGTAATGGAGCGGATGTTGCTAAACACTGTGTTCCTGCTGTCCCAGCAAAACGGATTTCAGTCACATTTAGGAGGATGGATGATAGCAAAATCCCATACCAATTCTCTCCTGAACCTGATTTGCTGAACTTAAAGCCTCTTGTTCGGTCTCCGTTGCCCAAAGTAGGCGCCGCACACCAAAATCAACATCAACAAAGTGTAATTAATGGCAGAGCAAATAAATCAGATTCACAAGAAACAATCATTAATTCAAATGCAAGAGTGTTAGCCAATAACTCGTTCGTCCTCCAAACAGACGAATTCCCCACACTAGGTGCCTTGAAATCGAGGAAACGTTGA MAGKSPELSPENEWMNLLKNLESSQIAQVFDGVCSDCQSLLKSRLLSLSNHNTVRKTIEMSSSNSCSSETSTPSSYIDNNQQQNSNNVGTPRSKESVRSERNTNYESPSPVNAKPQLRDLFSNHGLSPSNGNHTPSPTTTANGSSDEEEWNRFSQVKRKKDFVHYERVDGRKVNVVQGLELHTGVFSAEEQKKIVESVYNFQKMGRKGQLMERTYSEPLKWMRGKGRVTMQFGCCYNYAVDKDGNPPGIVRDEEVDPLPPLFKQMISRMVKWHVLPPTCVPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLAECNILFGSSLKILSPGEFAGPVSIPLPIGSVLVLKGNGADVAKHCVPAVPAKRISVTFRRMDDSKIPYQFSPEPDLLNLKPLVRSPLPKVGAAHQNQHQQSVINGRANKSDSQETIINSNARVLANNSFVLQTDEFPTLGALKSRKR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo02528.1 vs. NCBI nr
Match: gi|902224177|gb|KNA19697.1| (hypothetical protein SOVF_058830 isoform A [Spinacia oleracea]) HSP 1 Score: 923.7 bits (2386), Expect = 1.300e-265 Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 1
BLAST of Spo02528.1 vs. NCBI nr
Match: gi|902224178|gb|KNA19698.1| (hypothetical protein SOVF_058830 isoform B [Spinacia oleracea]) HSP 1 Score: 758.8 bits (1958), Expect = 5.400e-216 Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 1
BLAST of Spo02528.1 vs. NCBI nr
Match: gi|731321470|ref|XP_010671371.1| (PREDICTED: RNA demethylase ALKBH5-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 670.2 bits (1728), Expect = 2.500e-189 Identity = 343/460 (74.57%), Postives = 380/460 (82.61%), Query Frame = 1
BLAST of Spo02528.1 vs. NCBI nr
Match: gi|225447996|ref|XP_002270229.1| (PREDICTED: RNA demethylase ALKBH5-like [Vitis vinifera]) HSP 1 Score: 484.6 bits (1246), Expect = 2.000e-133 Identity = 265/466 (56.87%), Postives = 332/466 (71.24%), Query Frame = 1
BLAST of Spo02528.1 vs. NCBI nr
Match: gi|298204538|emb|CBI23813.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 484.2 bits (1245), Expect = 2.600e-133 Identity = 262/452 (57.96%), Postives = 327/452 (72.35%), Query Frame = 1
BLAST of Spo02528.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLJ9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_058830 PE=4 SV=1) HSP 1 Score: 923.7 bits (2386), Expect = 8.800e-266 Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 1
BLAST of Spo02528.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJN1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_058830 PE=4 SV=1) HSP 1 Score: 758.8 bits (1958), Expect = 3.800e-216 Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 1
BLAST of Spo02528.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CV54_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051230 PE=4 SV=1) HSP 1 Score: 670.2 bits (1728), Expect = 1.800e-189 Identity = 343/460 (74.57%), Postives = 380/460 (82.61%), Query Frame = 1
BLAST of Spo02528.1 vs. UniProtKB/TrEMBL
Match: F6H8X7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01810 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 1.400e-133 Identity = 265/466 (56.87%), Postives = 332/466 (71.24%), Query Frame = 1
BLAST of Spo02528.1 vs. UniProtKB/TrEMBL
Match: V4V082_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001432mg PE=4 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 3.200e-130 Identity = 224/338 (66.27%), Postives = 269/338 (79.59%), Query Frame = 1
BLAST of Spo02528.1 vs. TAIR (Arabidopsis)
Match: AT4G36090.3 (oxidoreductase, 2OG-Fe(II) oxygenase family protein) HSP 1 Score: 396.0 bits (1016), Expect = 3.200e-110 Identity = 191/284 (67.25%), Postives = 229/284 (80.63%), Query Frame = 1
BLAST of Spo02528.1 vs. TAIR (Arabidopsis)
Match: AT2G17970.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 392.1 bits (1006), Expect = 4.700e-109 Identity = 180/254 (70.87%), Postives = 216/254 (85.04%), Query Frame = 1
BLAST of Spo02528.1 vs. TAIR (Arabidopsis)
Match: AT1G48980.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 329.3 bits (843), Expect = 3.700e-90 Identity = 157/247 (63.56%), Postives = 196/247 (79.35%), Query Frame = 1
BLAST of Spo02528.1 vs. TAIR (Arabidopsis)
Match: AT2G48080.1 (oxidoreductase, 2OG-Fe(II) oxygenase family protein) HSP 1 Score: 130.2 bits (326), Expect = 3.300e-30 Identity = 94/305 (30.82%), Postives = 154/305 (50.49%), Query Frame = 1
BLAST of Spo02528.1 vs. TAIR (Arabidopsis)
Match: AT4G02940.1 (oxidoreductase, 2OG-Fe(II) oxygenase family protein) HSP 1 Score: 125.6 bits (314), Expect = 8.200e-29 Identity = 70/225 (31.11%), Postives = 120/225 (53.33%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02528.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02528.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02528.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo02528.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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