Spo02481 (gene)

Overview
NameSpo02481
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionProtease-associated RING/U-box zinc finger-containing protein
Locationchr3 : 5245464 .. 5251997 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAATGGTGGGCATATTATGTCTCCTAAGCTGTATTAACACCGCGTGCCACGAAGATGATGCAGAGATTTATATAACATTGAGGCCTAAAGTGACTTATTCTACCAAGTCCATGCCTAAAGGAGACGACGAAAAACGATGCTCGATATGTTTGGATGATTATGAAGATGGTGATATGGTTGAGTTTCTTGATTGCTTCCATCTTTATCATGGTCATTGTATTGATCAATGGCTTCCCCTTAGTCAGACTTGTCCTATTTGCCGCTTTCAATGCTGAATTATTGATCATTTATTTGGTAGTAATGTTATCTTTGAAGTTGTTTGATTGTGCTTTGTTGTTGAATTGCTTTCAAACAATTTGTAAGGTGTTGTTGTATGTAAATATTTCAATTTGTGTTATCTATGTGATATATTTGTATATGATTATGAACAAGTCTGAGTTACTTAATGTGTTTGTTACCAATTCTGCTCATGACCATTTGATGGAAATCATGGAATAGTGATTGGTGCTTAATTAAAGATGGCGCTGGGTCGGGCTGGTTTGAGGTACGGCACATGCCATCACAAAAAAAGCACGGCCCTGCACCAGGACGAAGTCGTGGGCCATGGGCTAAGCTCGCAACGCATTTTTTTGGGGAAAACGCGACTTGGCACGACAAAACACGTTCAATTGAGTGAAATCGGATTTAGTCACTAAAGCACTGTCTGAAGCCTGGCAAGTGGGCAATTGGGCATGGGTCGTGCCTGGACCACATTTTTGAAATTTTCAGCATAGTCTGGCCAACACATAACAAGTGGGTTTGGCATAAACTAAGCCCGTTCAAGTGTGGCACGTAGGCTAAGCATGAATCTTACCCAACCTGACCCATGCACAACCATCGATCTTTACGCTTAATACAAATCAAGGCAATATAATGATTCATTATAAGGTGTAAATTAAAAAACATTCCCCGTGCCAATCATGTTATGAAAATCGCTCATAAATTCATAATACGAAATCTGTCGTATTTTTTATTTAGTCAATTTTGAAAGATGAGCTAAAAGTTGGATTAGGAAGGGAAAGAGGATAGATAGAAATGAAACATCAATTGTTTGATTTTCTTAACAAATTATTATTATACACGAATATGACCAAAGTTTCAAATCTAATCCAAACCAACAAAAAAAGAAAATTTAGTTTGGGTGAAGTAACTATCTAATCCAAACTAATCATAAGTATCCAATATTTTCAACCAAATATGATTCAAACAACCGCAATTTGGATTATACACCCGGGTGTACAGTGTTCATGGTGCACCCTGAAGAACATTTGTTGAGTATCTAAAGAACATGAAGAATGATTTCAATGTACATATACAAATGAAATATTTGCAATATATGTACTATGGATTTGAACTATATGTTCATTTTAGTATATGTTCTATGAATATGAATGATATGTTCTTTGCATTTGAACTATATGTTCTTTTAAAAATAAGGTGCACAGTGAGCATTGTGCACCCGGGTATATAAACCATATTTTGTCAAACAGCCTATTTGCCATGTAAATCGTACTGGTTGCACCGACCCAAAAAGCAACACAAATTACGATCCCGAACCACGTAAAACTGTAAATTAACTTAACCCGAGGATTTATTTTTATAGTCATAGGCACGGCTGCTCGGCACGAGCATGGCTTAGTGCCAAGCCTAGTAGACCCTTACTTAGCCGCTCAGTGCCAAGCCCTCGTAGACCATCAAGGGCACAATCAAGTACGGAGTAGTCAATTTGACAGTTAGGCGCACAACCGCCAAAAAGATCCCTCCTCAGGTTCTTCAGCGCAGCATCAATGGAAGTTTCACGGACTGAAAACCCCAAAAATTCCGGTAATTGCTATTATTTTTATGTAGAACCCTTTCTCTATTCAATTTCGCTTTAAGGTTAACTGCAATCGTATAAATTTATGATTTCTTAATTTAATTTACTGTATATATGTTCATCCCCATTTTATGAGCAATTTGAATTATTGCCCAAATTGATGGATTTAACCCTAGATTTTAGTAATTTGTTGCAGATAATCGTTTCAGTATGCGCTCTGATCTATGTTCTAGGTTCACAAATTTGAGAAATGTTTGAGATAAATTGAGCTAATTTTTTAGTTAAAAATCTCAATTTTATTCCCCGTTTTGTTTCGAATTAGTCCTTGAAGTGATTATTTTGAATTAGCTTATCGCTCATACAAGAATTTTCTGTTTTAATTTGGTAACCCCCATAAAATTAGGGATTTTAGGAATGCTTAATACAGCTGCAAAATGTGGACTAGTTTTTCAAGTTGGGGGAAATCTATTTGATGATCTAGGTATGGCTAACATCATTCCAAGCAAGTAGCAATAATGGATTAGGATTTTCAAGGGAAGAACCTTCTTCCCCGCCGAAAACACTAGTGAAAATTGATTTAGTTTTTCAAGCCTAGTTAATCAGTTGAACTCCATACTAGTTGAAGTATGTGTGTGTGACTGAGTTTCTTGAGCAATTTGAAAAACAGTGACGGGGATTCATTGTTCCGGAATTGCTAGATTTGCAGTTTGATGATGGTAGAGTGCTATAAGTTAACTTTTGCTTGTACTGAGAATCTGAGATTCTGAGAATGAAGGCTGACTATCTGTGGCTTTGTTCAATCTGCACCAAGTACTTGTTTGAGCCTTCTCAGTCTTTAGTACATTAGGAGTACAATTGCAATTTTCTGCAAGATTATAATGCAGTTTAGGCTCTATTTGCACTGATTATAAAAGTGTTCAATCTACAAGACAAGGTTACAGAAGAAACAATGTTCATATATAGGCTTTTTAACTGAGACAAGGTTATAGAAGAAACAATGTTCATAACTTGATATATAGGCTTGTTTAACTAATACACGCCTATCTAAATTTTTTTGTTGAAATCTCAATTTTATCTTCCCTCAAAAAACAAAAAACAAAAACAAACTTGTGTCTTGTGCTGAAGAAAAAGTATCATCTGCTGATATGAGCAATGAAATAATCCATTTCTAAGCGAGAACTTCCACCATCTGCAACTGAACCTCGGACTGCACCACCTAGTTCTTCTGCCCTTTTCCTCATATCTTCTCCTTCCTTTGATGTCATCAACAGTCTTACTGTGTCCTCCACCATAGTTGATGTTACTCTCTTAGCTCTTTGTTCCCACTCCCTGACTAACAACCCAGTCTTTAGAACTTCCGTTATCAAAATACTGTTTTTTGGCTGATCAGAATGCATAGGCCATGCTGCTATTGGCACTCCCATGCTGATACTCTCCATACACGAGTTCCAACCACAATGACTCATAAATCCTCCTGTAGATGGGTGCGCAAGAATTTCAAGCTGAGGTGCCCAGTCTCTTACCACCAATCCCCTGTTCTCTATTCTGTTTTCGTAACCTTTTGGCAGCTGAGGCCTTTTCACATCATCTTCTGCGGAAATATCTAATCCATCAGCACTTCTTACAACCCATAGAAACTTTTGGCCACTTCTTTCCAATCCAACTGCCAACTCGCTGATCTGATCTTCTGTCATTGATATTGTTGTTCCAAATGATACATAAATCACTGAATCTTTCTCTTGTTTGTCCAGCCACTCTAGGCATCTATGTCTGGTTTTACTGCTTTTTATTTCAACTGGATTCAAAGGTCCAATTGCGAAAAGCTTTTTGTTGGTGTTTGTAGGTAGTTTTGCCAGTAAGTTTACATATTTACCTTCAATCTCTCTGCATGTGTTGAAGAGTCTTCCGCTCTCAAAATTCAAAACTTTGTATTGATTTGCTACAAAGTCTTGAAATTCTGGTGTAAAGCACCCTTCACTTGAGGGGATGATTCCGTCTTTTGGGATATCAGAATCTAGATGAAAACTCGTGTCTGTTATTGATTCCCAAATGTGGAAGAATATGGTGAAGGCAGAGACACTGTGTAGGGCATATGACTCCGCATTTGGGATTAATTTCACATCTTGAACAACTGAAGCCATTAGAGTATCATGAACAACGATGATTCTCCGATACTTGGTTGAGAGTTCCTGTAAAAGTCGGAACACAGGTTTACGGAGTTGTAAGGAAGCATCGAAAAGTGGTTGGAGGTGACCAGGGAATTTGGTATCAGCACTATATTTGGGAGGTTTTTTGGTAAAAGGAGGTAGTTGTAAGTCATGGAAGTGCATTTTGTGAGTATTTTGTGGGTCCCAACCATGGAGGCGTTGTTTGGCTTGGCGGTTATGTGCTATGGATCCTGTAAAATGAATTGGTATGCCATATGAGACTATAAGATTTGAAAGATGGAGAGTCTCATTGAGATGGCCTTGCATTGGGAAGGGTACTATGATTGCTGCAACTGAGGGATGTTTAAGGATATATTCTTGATCATTTTGATCTGCCATTTTTGGTCATATCTTGGGTTTAGAGGATGTAGCTTTTATATAGTATTTCGTAGAAGATTAGCATGAATATGGACAGACGTCATATTTGACATTCATACCTTATCCTTTTTTTTAATATTCAAACCTCTCTTTCATTACTCTTGGGTGCTACATTTGGGGTTTAGAAGAACACGTCTTGTGTTATATATTTGTTGGATCATTTATATCTCCCGGCCTTTTCCTGCCGCTTAAGTAGTGACATATTGAAAAATCTACTGATAGATTTTTACTGTGATTTGAGAAGTGACAACTTTTCGAGATATCTTAAATAGTACTACGTATATGTAATTTACTTCAGAGTTCAGATGGGGAATATTACATTGCAGCATTTTTTGCCATTTGTATACAATCAATTTCTGTCCTTGTCATGATTGCTTGTATTGTTTGCTTAGATCTTTGATTATTGCAAAACTCAGTACCTAACCATGAGAAAAGAAGACAGGTAGCTGTCATCATTTGGTAGTTTAGTTGAAACCTGCAAGTTTGTAAAACCCTCTTTACAAACTTTTATGTATTTGGCTCCGTTTGTTTTGACGGAAAACGTTTTCAAAAAAATGTTTTTCCCATTTTCTTGTGCTTGTTTTGTTAAGGGTGAAAAACAATTTTCCCAATGGTGGAAAACTCTTTTCCTTTTATAAAAAAGGAATGTCACATTATCTTTTCTACTCTGTACATCCCTTATTCTCTCCTCCTATCCATCATCTCCTTTCACTTCCATTTCCTTTTCCTCTGTGACTTTTCTTGTAAGAAAACAATTTTACAATTGTGTTTTCCGTTGAAAATTGTTTTCCATTAAAAATGTTTTCGTTGAAACAAACGGAACCCTAGTTTAAGCACCAGTTTTTGCTAAGTAATCGCCATTTGATGTTTGATATTTGCTTTGAAAATTTTTGTCGGTAGGGCATTTTTGTTGATGCATGATGCGTAATATTAATATATATTATAATCTGATCCTTTTTTGGTTTATAGGGAGCCAAAAAAGGCAGTAATGTACCATACAACCTCCAAGACTACACCGACTAAGATAATTATTACACTGATGTTATGGTTACTCAAGAGAGATATTGCTAAACTGAAAGGATAAGAAAATTGGGCACGAAGAAAAGCTAGTGAAGTAAGACACGTGGAGTATGCTGAATGCAGTTTTGCTAATGTGGGAAGGACATTCATTAGTTGCTGAACTGCTGTAGTAATTGGGCGGTTTCCCACCAAATTGATCAAGCTACATGTAGATATATTGATTTTCAACAACAGTTGCAATCAAATTGATTGATTTCCAACTGTTTTTCTCCCCCTCTTTCGCTGTTTGCAATATTTTGCTAGCTGGTGTTATATGGCCTAGCATGGGGAACTCTTAAATTTCCTCGCACAGTTGGGCCATTCTCTGTTTTCTCTGATTGAGAATGTGATAAACATTCAGGAATGTGATAAGCATGTTGTTATAATCAGTACTGCAGGTGAAAGAGATAGCCATTTCGGCTATTTATTGGTGTTAGACTGATAAAGTTCAAGTCAACATCAGCAAAAGGATGAAAATCTGTTATTATCTAAGATAGATTCTTCACTGTAAAATTTATTCAGGGTATTAAAACTACCATTGTAATATAGATTTTTTGTCAGGTATATCAATGAGTTTACACTTGTAGATATGCTCAACTACTAAAGTTATTGATAATTCATCTCCAGCTTTTATGTTTCTAAATTCAGTTACACATTCTGTTTGTGTAGGGGCACGGGGCACGAGGCACGCGGCCACCAGAAGATCCCATTCTGTCTCGATCAGGAACGTTTGGTTTGATTCTACCACAAATTTCATACAACGGTACGTCATGGCTTATGCAAGATATTGCTACCTACTTGTTTAAGGAAGTTGTGACCTTATTATTGATGATTTTGGTCCTTTGCCTTTTGGTTGAATGGTCCTATGTCAGTTAATGCTGATATCAATGGGTGATTCTACCTATCACACTGACATAACAACCTATCATGGTTGTCCTTAAATGCAATTTGGCTCAAGGGTAAACTTGTGTAGTTGAGCTTGCTAATTTGTGATAGGTGTTGGTTCAGTAGAGTCTATTCTTCTTATCTAA

mRNA sequence

ATGCCAATGGTGGGCATATTATGTCTCCTAAGCTGTATTAACACCGCGTGCCACGAAGATGATGCAGAGATTTATATAACATTGAGGCCTAAAGTGACTTATTCTACCAAGTCCATGCCTAAAGGAGACGACGAAAAACGATGCTCGATATGTTTGGATGATTATGAAGATGGTGATATGGTTGAGTTTCTTGATTGCTTCCATCTTTATCATGGCACGGCTGCTCGGCACGAGCATGGCTTAGTGCCAAGCCTAGTAGACCCTTACTTAGCCGCTCAGTGCCAAGCCCTCGTAGACCATCAAGGGCACAATCAAGCGCACAACCGCCAAAAAGATCCCTCCTCAGGTTCTTCAGCGCAGCATCAATGGAAGTTTCACGGACTGAAAACCCCAAAAATTCCGGGGCACGGGGCACGAGGCACGCGGCCACCAGAAGATCCCATTCTGTCTCGATCAGGAACGTTTGGTTTGATTCTACCACAAATTTCATACAACGGTGTTGGTTCAGTAGAGTCTATTCTTCTTATCTAA

Coding sequence (CDS)

ATGCCAATGGTGGGCATATTATGTCTCCTAAGCTGTATTAACACCGCGTGCCACGAAGATGATGCAGAGATTTATATAACATTGAGGCCTAAAGTGACTTATTCTACCAAGTCCATGCCTAAAGGAGACGACGAAAAACGATGCTCGATATGTTTGGATGATTATGAAGATGGTGATATGGTTGAGTTTCTTGATTGCTTCCATCTTTATCATGGCACGGCTGCTCGGCACGAGCATGGCTTAGTGCCAAGCCTAGTAGACCCTTACTTAGCCGCTCAGTGCCAAGCCCTCGTAGACCATCAAGGGCACAATCAAGCGCACAACCGCCAAAAAGATCCCTCCTCAGGTTCTTCAGCGCAGCATCAATGGAAGTTTCACGGACTGAAAACCCCAAAAATTCCGGGGCACGGGGCACGAGGCACGCGGCCACCAGAAGATCCCATTCTGTCTCGATCAGGAACGTTTGGTTTGATTCTACCACAAATTTCATACAACGGTGTTGGTTCAGTAGAGTCTATTCTTCTTATCTAA

Protein sequence

MPMVGILCLLSCINTACHEDDAEIYITLRPKVTYSTKSMPKGDDEKRCSICLDDYEDGDMVEFLDCFHLYHGTAARHEHGLVPSLVDPYLAAQCQALVDHQGHNQAHNRQKDPSSGSSAQHQWKFHGLKTPKIPGHGARGTRPPEDPILSRSGTFGLILPQISYNGVGSVESILLI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02481.1Spo02481.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo02481.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo02481.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo02481.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo02481.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 43..72
score: 1.
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 42..71
score: 1.

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050832 defense response to fungus
biological_process GO:0002213 defense response to insect
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
cellular_component GO:0016020 membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004672 protein kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo025480.92Barchart | Table
Spo041290.78Barchart | Table
Spo165870.78Barchart | Table
Spo253500.77Barchart | Table
Spo177130.76Barchart | Table
Spo080340.76Barchart | Table
Spo127120.75Barchart | Table
Spo001720.75Barchart | Table
Spo122180.75Barchart | Table
Spo117250.74Barchart | Table
Spo024540.73Barchart | Table
Spo035460.73Barchart | Table
Spo106530.73Barchart | Table
Spo035580.72Barchart | Table
Spo121060.72Barchart | Table
Spo201740.71Barchart | Table
Spo140970.71Barchart | Table
Spo027320.71Barchart | Table
Spo083720.71Barchart | Table
Spo281890.71Barchart | Table
Spo096360.71Barchart | Table
Spo260130.71Barchart | Table
Spo104850.71Barchart | Table
Spo238430.70Barchart | Table
Spo158660.70Barchart | Table
Spo031840.70Barchart | Table
Spo207290.69Barchart | Table
Spo195030.69Barchart | Table
Spo077860.69Barchart | Table
Spo268990.69Barchart | Table
Spo109100.69Barchart | Table
Spo063720.69Barchart | Table
Spo251290.68Barchart | Table
Spo018070.68Barchart | Table
Spo084190.68Barchart | Table
Spo198680.68Barchart | Table
Spo202920.68Barchart | Table
Spo205950.68Barchart | Table
Spo217440.68Barchart | Table
Spo230360.68Barchart | Table
Spo251450.68Barchart | Table
Spo147190.67Barchart | Table
Spo068850.67Barchart | Table
Spo233850.67Barchart | Table
Spo237700.67Barchart | Table
Spo058420.67Barchart | Table
Spo097610.67Barchart | Table
Spo215090.67Barchart | Table
Spo215250.67Barchart | Table
Spo115120.67Barchart | Table
Spo065430.66Barchart | Table
Spo257870.66Barchart | Table
Spo205620.66Barchart | Table
Spo267800.66Barchart | Table
Spo247690.66Barchart | Table
Spo015140.66Barchart | Table
Spo253070.66Barchart | Table
Spo128600.66Barchart | Table
Spo172410.66Barchart | Table
Spo119750.66Barchart | Table
Spo238420.65Barchart | Table
Spo077840.65Barchart | Table
Spo227720.65Barchart | Table
Spo020910.65Barchart | Table
Spo120250.65Barchart | Table
Spo198880.65Barchart | Table