Spo02432 (gene)

Overview
NameSpo02432
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionGb|AAF02129.1
LocationSpoScf_00951 : 58432 .. 58848 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAGGAGGAATAACAATAATCGAAGGGGTGGTGGAGCAAATCAAGAATTGGATTTGAAGCTAAATCTGTCACCCCAACCAACAAGGGTGGTTGGGGGACCAGTGATAGGACGACATAATCATCATAGAATGTCAACATCATCGTCAGAGGAGTCTCCACCAAGATCATGTGTTTCTTCTGAAGAAAGCCTGAAATACGCTAGCAGTCCTGAGACTTCCTCCATGGTTCTTGTGGGTTGTCCCAGGTGTCTTATGTATGTCATGCTGTCTGAGGCTGATCCTCGCTGCCCCAAATGTAAGAGTACCGTCCTCCTCGATTTTCTCCGCAACAACAACAACAACAACAACAACAACAACAACAACATCATCAACAACCAAAACAACAACCATCACAACGACAACGATCGACGCTAA

mRNA sequence

ATGAGTAGGAGGAATAACAATAATCGAAGGGGTGGTGGAGCAAATCAAGAATTGGATTTGAAGCTAAATCTGTCACCCCAACCAACAAGGGTGGTTGGGGGACCAGTGATAGGACGACATAATCATCATAGAATGTCAACATCATCGTCAGAGGAGTCTCCACCAAGATCATGTGTTTCTTCTGAAGAAAGCCTGAAATACGCTAGCAGTCCTGAGACTTCCTCCATGGTTCTTGTGGGTTGTCCCAGGTGTCTTATGTATGTCATGCTGTCTGAGGCTGATCCTCGCTGCCCCAAATGTAAGAGTACCGTCCTCCTCGATTTTCTCCGCAACAACAACAACAACAACAACAACAACAACAACAACATCATCAACAACCAAAACAACAACCATCACAACGACAACGATCGACGCTAA

Coding sequence (CDS)

ATGAGTAGGAGGAATAACAATAATCGAAGGGGTGGTGGAGCAAATCAAGAATTGGATTTGAAGCTAAATCTGTCACCCCAACCAACAAGGGTGGTTGGGGGACCAGTGATAGGACGACATAATCATCATAGAATGTCAACATCATCGTCAGAGGAGTCTCCACCAAGATCATGTGTTTCTTCTGAAGAAAGCCTGAAATACGCTAGCAGTCCTGAGACTTCCTCCATGGTTCTTGTGGGTTGTCCCAGGTGTCTTATGTATGTCATGCTGTCTGAGGCTGATCCTCGCTGCCCCAAATGTAAGAGTACCGTCCTCCTCGATTTTCTCCGCAACAACAACAACAACAACAACAACAACAACAACAACATCATCAACAACCAAAACAACAACCATCACAACGACAACGATCGACGCTAA

Protein sequence

MSRRNNNNRRGGGANQELDLKLNLSPQPTRVVGGPVIGRHNHHRMSTSSSEESPPRSCVSSEESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNNNNNNNNNNNNIINNQNNNHHNDNDRR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02432.1Spo02432.1mRNA


Homology
[Close]
BLAST of Spo02432.1 vs. NCBI nr
Match: gi|902186460|gb|KNA10688.1| (hypothetical protein SOVF_141940 [Spinacia oleracea])

HSP 1 Score: 247.3 bits (630), Expect = 1.600e-62
Identity = 135/138 (97.83%), Postives = 135/138 (97.83%), Query Frame = 1 

		  

Query: 1   MSRRNNNNRRGGGANQELDLKLNLSPQPTRVVGGPVIGRHNHHRMSTSSSEESPPRSCVS 60
           MSRRNNNNRRGGGANQELDLKLNLSP PTRVVGGPVIGRHNHHRMSTSSSEESPPRSCVS
Sbjct: 1   MSRRNNNNRRGGGANQELDLKLNLSPPPTRVVGGPVIGRHNHHRMSTSSSEESPPRSCVS 60

Query: 61  SEESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNNNNNNNNNN 120
           SEESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNNNNNNNNNN
Sbjct: 61  SEESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNNNNNNNNNN 120

Query: 121 NNIINNQNNNHHNDNDRR 139
             IINNQNNNHHNDNDRR
Sbjct: 121 --IINNQNNNHHNDNDRR 136
[Close]
BLAST of Spo02432.1 vs. NCBI nr
Match: gi|731348282|ref|XP_010685416.1| (PREDICTED: uncharacterized protein LOC104899835 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 146.4 bits (368), Expect = 3.800e-32
Identity = 89/124 (71.77%), Postives = 97/124 (78.23%), Query Frame = 1 

		  

Query: 1   MSRRNNNNRRGGGA-----NQELDLKLNLSPQPTRVVGGPVIGRHNHHRMSTSSSEE--S 60
           MSRRNN  RR G +     NQELDLKLNLS         P +      RMSTSSSE+  S
Sbjct: 1   MSRRNN--RRSGMSSSNNNNQELDLKLNLSVSARPAAAAPRV--TEVVRMSTSSSEDQSS 60

Query: 61  PPRSCVSSEESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNNN 118
           PPRSCVSSEESLKY+SSPET+SMVLVGCPRCLMYVMLSEADP+CPKCKSTVLLDFLRNNN
Sbjct: 61  PPRSCVSSEESLKYSSSPETTSMVLVGCPRCLMYVMLSEADPKCPKCKSTVLLDFLRNNN 120
[Close]
BLAST of Spo02432.1 vs. NCBI nr
Match: gi|743875083|ref|XP_010907246.1| (PREDICTED: uncharacterized protein LOC105033959 [Elaeis guineensis])

HSP 1 Score: 122.5 bits (306), Expect = 5.900e-25
Identity = 66/110 (60.00%), Postives = 79/110 (71.82%), Query Frame = 1 

		  

Query: 10  RGGGANQELDLKLNLSPQPTRVVGGP-----VIGRHNHHRMSTSSSEESPPRSCVSSEES 69
           R  G + ++DLK+NLSP P R  GGP         H+ +R S+SSS  SPP SCVSSE  
Sbjct: 3   RNNGKSPKVDLKVNLSPAPPRGRGGPSSRAVADDGHSPNRSSSSSSTVSPPSSCVSSEGE 62

Query: 70  LKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNNNN 115
            K ++SPE +SMVL GCP+CLMYVMLSE DP+CPKCKSTVL+DF R NNN
Sbjct: 63  QKQSNSPEATSMVLAGCPQCLMYVMLSEDDPKCPKCKSTVLVDFHRGNNN 112
[Close]
BLAST of Spo02432.1 vs. NCBI nr
Match: gi|449451177|ref|XP_004143338.1| (PREDICTED: uncharacterized protein LOC101217127 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 1.900e-23
Identity = 67/113 (59.29%), Postives = 81/113 (71.68%), Query Frame = 1 

		  

Query: 1   MSRRNNNNRRGGGANQELDLKLNLSP-QPTRVVGGPVIGRHNHHRMSTSSSEESPPRSCV 60
           M+RRN+    GG A  +L+LKLNLSP +  R V  P          S + S  SPP SCV
Sbjct: 1   MNRRNSGG--GGAATPKLELKLNLSPPRANRGVESP--------SRSATVSPTSPPSSCV 60

Query: 61  SSEESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNN 113
           SSEE ++Y++SPET+SM+LVGCPRCLMYVMLSE DP+CPKCKSTVLLD L +N
Sbjct: 61  SSEEEMRYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN 103
[Close]
BLAST of Spo02432.1 vs. NCBI nr
Match: gi|659125280|ref|XP_008462606.1| (PREDICTED: uncharacterized protein LOC103500924, partial [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 1.900e-23
Identity = 67/113 (59.29%), Postives = 81/113 (71.68%), Query Frame = 1 

		  

Query: 1   MSRRNNNNRRGGGANQELDLKLNLSP-QPTRVVGGPVIGRHNHHRMSTSSSEESPPRSCV 60
           M+RRN+    GG A  +L+LKLNLSP +  R V  P          S + S  SPP SCV
Sbjct: 1   MNRRNSGG--GGAATPKLELKLNLSPPRANRGVESP--------SRSATVSPTSPPSSCV 60

Query: 61  SSEESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNN 113
           SSEE ++Y++SPET+SM+LVGCPRCLMYVMLSE DP+CPKCKSTVLLD L +N
Sbjct: 61  SSEEEMRYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN 103
[Close]
BLAST of Spo02432.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QVF9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_141940 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.400e-62
Identity = 135/138 (97.83%), Postives = 135/138 (97.83%), Query Frame = 1 

		  

Query: 1   MSRRNNNNRRGGGANQELDLKLNLSPQPTRVVGGPVIGRHNHHRMSTSSSEESPPRSCVS 60
           MSRRNNNNRRGGGANQELDLKLNLSP PTRVVGGPVIGRHNHHRMSTSSSEESPPRSCVS
Sbjct: 1   MSRRNNNNRRGGGANQELDLKLNLSPPPTRVVGGPVIGRHNHHRMSTSSSEESPPRSCVS 60

Query: 61  SEESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNNNNNNNNNN 120
           SEESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNNNNN  NNN
Sbjct: 61  SEESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNNNNN--NNN 120

Query: 121 NNIINNQNNNHHNDNDRR 139
           NNIINNQNNNHHNDNDRR
Sbjct: 121 NNIINNQNNNHHNDNDRR 136
[Close]
BLAST of Spo02432.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BY39_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g170850 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.600e-32
Identity = 89/124 (71.77%), Postives = 97/124 (78.23%), Query Frame = 1 

		  

Query: 1   MSRRNNNNRRGGGA-----NQELDLKLNLSPQPTRVVGGPVIGRHNHHRMSTSSSEE--S 60
           MSRRNN  RR G +     NQELDLKLNLS         P +      RMSTSSSE+  S
Sbjct: 1   MSRRNN--RRSGMSSSNNNNQELDLKLNLSVSARPAAAAPRV--TEVVRMSTSSSEDQSS 60

Query: 61  PPRSCVSSEESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNNN 118
           PPRSCVSSEESLKY+SSPET+SMVLVGCPRCLMYVMLSEADP+CPKCKSTVLLDFLRNNN
Sbjct: 61  PPRSCVSSEESLKYSSSPETTSMVLVGCPRCLMYVMLSEADPKCPKCKSTVLLDFLRNNN 120
[Close]
BLAST of Spo02432.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KHJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G454370 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.300e-23
Identity = 67/113 (59.29%), Postives = 81/113 (71.68%), Query Frame = 1 

		  

Query: 1   MSRRNNNNRRGGGANQELDLKLNLSP-QPTRVVGGPVIGRHNHHRMSTSSSEESPPRSCV 60
           M+RRN+    GG A  +L+LKLNLSP +  R V  P          S + S  SPP SCV
Sbjct: 1   MNRRNSGG--GGAATPKLELKLNLSPPRANRGVESP--------SRSATVSPTSPPSSCV 60

Query: 61  SSEESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNN 113
           SSEE ++Y++SPET+SM+LVGCPRCLMYVMLSE DP+CPKCKSTVLLD L +N
Sbjct: 61  SSEEEMRYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN 103
[Close]
BLAST of Spo02432.1 vs. UniProtKB/TrEMBL
Match: F6HKQ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g02600 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.200e-22
Identity = 70/119 (58.82%), Postives = 79/119 (66.39%), Query Frame = 1 

		  

Query: 1   MSRRNNNNRRGGGANQELDLKLNLSPQPTRVVGGPVIGRHNHH-RMSTSSSEESPPRSCV 60
           MSRRN           +LDLKLNLSP        P   RH      S + S  SPP SCV
Sbjct: 99  MSRRNG---------PKLDLKLNLSP--------PRANRHAESPSRSATLSPTSPPSSCV 158

Query: 61  SSE----ESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNNNN 115
           SSE    E+L+Y++SPE +SMVLVGCPRCLMYVMLSE DP+CPKCKSTVLLDFL +NNN
Sbjct: 159 SSELNQDETLRYSNSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHDNNN 200
[Close]
BLAST of Spo02432.1 vs. UniProtKB/TrEMBL
Match: A5BPL0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012166 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.200e-22
Identity = 70/119 (58.82%), Postives = 79/119 (66.39%), Query Frame = 1 

		  

Query: 1   MSRRNNNNRRGGGANQELDLKLNLSPQPTRVVGGPVIGRHNHH-RMSTSSSEESPPRSCV 60
           MSRRN           +LDLKLNLSP        P   RH      S + S  SPP SCV
Sbjct: 162 MSRRNG---------PKLDLKLNLSP--------PRANRHAESPSRSATLSPTSPPSSCV 221

Query: 61  SSE----ESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNNNN 115
           SSE    E+L+Y++SPE +SMVLVGCPRCLMYVMLSE DP+CPKCKSTVLLDFL +NNN
Sbjct: 222 SSELNQDETLRYSNSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHDNNN 263
[Close]
BLAST of Spo02432.1 vs. TAIR (Arabidopsis)
Match: AT5G06270.1 (unknown protein)

HSP 1 Score: 105.1 bits (261), Expect = 3.400e-23
Identity = 65/111 (58.56%), Postives = 77/111 (69.37%), Query Frame = 1 

		  

Query: 17  ELDLKLNLSPQPT---RVVGGPVIGRHNHHRMSTSSSEESPPRSCVSSE-----ESLKYA 76
           +L+LKLNLSP  +   R+V  P          S ++S  SPP SCVSSE      S++Y+
Sbjct: 7   KLELKLNLSPPTSSQRRMVRSP--------SRSATTSPTSPPSSCVSSEMNQDEPSVRYS 66

Query: 77  SSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNNNNNNNNN 120
           +SPET+SMVLVGCPRCLMYVMLSE DP+CPKCKSTVLLDFL  N  N N N
Sbjct: 67  TSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANAN 109
[Close]
BLAST of Spo02432.1 vs. TAIR (Arabidopsis)
Match: AT3G11600.1 (unknown protein)

HSP 1 Score: 92.4 bits (228), Expect = 2.300e-19
Identity = 58/112 (51.79%), Postives = 74/112 (66.07%), Query Frame = 1 

		  

Query: 1   MSRRNNNNRRGGGANQELDLKLNLSPQPTRVVGGPVIGRHNHHRMSTSSSEESPPRSCVS 60
           MSRRN N  +       L+L+LNLSP P++     ++   N  R +T+S     P SCVS
Sbjct: 1   MSRRNKNGPK-------LELRLNLSPPPSQASQMSLVRSPN--RSNTTS-----PSSCVS 60

Query: 61  SEESLKYASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDFLRNN 113
           SE + +   +   +SMVLVGCPRCLMYVMLS+ DP+CPKCKSTVLLDFL+ N
Sbjct: 61  SETNQE--ENETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQEN 96
[Close]
BLAST of Spo02432.1 vs. TAIR (Arabidopsis)
Match: AT5G22270.1 (unknown protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.400e-8
Identity = 42/107 (39.25%), Postives = 55/107 (51.40%), Query Frame = 1 

		  

Query: 14  ANQELDLKLNLSPQPTRVVGGPVIGRHNHHRMSTSSSEESPPRSCVSSEESLKYASSPET 73
           +N  LDLKLN+SP                  + +S   ES   S  S E         E 
Sbjct: 7   SNLGLDLKLNISPS-----------------LDSSLLTESSSSSLCSEEAE---GGGGEA 66

Query: 74  SSMVLVGCPRCLMYVMLS-EADPRCPKCKSTVLLDFLRNNNNNNNNN 120
            SMV+VGCP C+MY++ S E DPRCP+C S VLLDFL  N++  + +
Sbjct: 67  KSMVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDFLTGNHSKKSTS 93
[Close]
BLAST of Spo02432.1 vs. TAIR (Arabidopsis)
Match: AT3G52561.1 (unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.000e-6
Identity = 35/111 (31.53%), Postives = 49/111 (44.14%), Query Frame = 1 

		  

Query: 4   RNNNNRRGGGANQELDLKLNLSPQPTRVVGGPVIGRHNHHRMSTSSSEESPPRSCVSSEE 63
           RN N +RG             S +P+      V+        S SS   S   SC++  E
Sbjct: 2   RNKNGKRG-------------SVEPSARTVASVVANGRFEGRSPSSDTSSSQNSCLTRTE 61

Query: 64  SLK------YASSPETSSMVLVGCPRCLMYVMLSEADPRCPKCKSTVLLDF 109
            +K      +    E   MV++GC  C+MYVM+ +   RCPKCK T L+ F
Sbjct: 62  EVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQRCPKCKCTDLIFF 99
The following BLAST results are available for this feature:
BLAST of Spo02432.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902186460|gb|KNA10688.1|1.6e-6297.8hypothetical protein SOVF_1419... [more]
gi|731348282|ref|XP_010685416.1|3.8e-3271.7PREDICTED: uncharacterized pro... [more]
gi|743875083|ref|XP_010907246.1|5.9e-2560.0PREDICTED: uncharacterized pro... [more]
gi|449451177|ref|XP_004143338.1|1.9e-2359.2PREDICTED: uncharacterized pro... [more]
gi|659125280|ref|XP_008462606.1|1.9e-2359.2PREDICTED: uncharacterized pro... [more]
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BLAST of Spo02432.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QVF9_SPIOL1.4e-6297.8Uncharacterized protein OS=Spi... [more]
A0A0J8BY39_BETVU2.6e-3271.7Uncharacterized protein OS=Bet... [more]
A0A0A0KHJ4_CUCSA1.3e-2359.2Uncharacterized protein OS=Cuc... [more]
F6HKQ3_VITVI4.2e-2258.8Putative uncharacterized prote... [more]
A5BPL0_VITVI4.2e-2258.8Putative uncharacterized prote... [more]
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BLAST of Spo02432.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo02432.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G06270.13.4e-2358.5unknown protein[more]
AT3G11600.12.3e-1951.7unknown protein[more]
AT5G22270.11.4e-839.2unknown protein[more]
AT3G52561.11.0e-631.5unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 106..126
scor
NoneNo IPR availablePANTHERPTHR33177FAMILY NOT NAMEDcoord: 4..126
score: 2.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo127420.68Barchart | Table
Spo200530.67Barchart | Table
Spo029150.65Barchart | Table
Spo268500.65Barchart | Table