Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGGTTCATCATCAAAATTCCACCAAATTGATGAAACCCTAACTTTAATTCCGACCCTTCCTAACGATCTCTCTGCTTTGATCCTTTCTTTCATACCTTTCACCTTTCATGGCCGATTGAAGTCAACCTGTAAATCATGGCGTAATTTTTACTCTTCTAAAACCCCACTTTCTATCCGCCATGCTCATCTTCCACTTTCTTCACTTTCTCACCTCCTTTGCCTGTTTCCAGAAGACCCTTCTCTGTCCTCCCCTTATCTGTTTGACCCGACCCATTTGGCGTGGGCCCCACTTCCGCCCATGCCCATCAACCCGCATGTTTACTCTCTCTCTAATTTTGCGTCTCTTGCAATCGGACCGGAGCTTTATGTGCTGGGTGGGTCCCTCTTTGATACGCGGTCTTTCCCCATGGACCGCCCCGTCGCCTCCGCCGCTGTTTTCCGGTATGATCTCGCGGTTGGTGTGTGGGTCCAGCTTGCACCGATGATCACCCCACGTGGGTCCCACGCGGCGGTGGCTGTGGAGGAGGGGCGGGGGAGGATTGTGGTCGCGGGTGGTGGGTCTCGGCATGCGATGTTTGGTGCGGCGGGGACAAGGGTTGATGTTGCTGAAGTGTATGATGTTGAGAAGGATGAGTGGACATCACTCGCTGACCTCCCAGGTTCCCGGGCCGGGTGTGTGGGTTTCTGCGTGGGTAGTGGGAGGGAGTTATGGGTGATGGGTGGGTACGGCGAAGCAAGGACGATAAATGGCGTTTTGCCGGTGGATGAACACTATAAGGATGTGGTGGTGTTGGAATTGGAGAATGGTGGTGGTGGTGGTGGTGGTGGAGTGGAGCAGGGGAGGTGGAGAGAAATTGGGGATATGTGGGGTAATGAGGAGCGAGCTAGGCTTGGAAAGGTGGTTGTAATTGATGATGAAGGGGTGAAGAATTTGCCAAAGGTGTTTATGCTTGATGGAAATGACATTTTCAGGTGAATTATCCATGTTCCTTACACTCCATTTTTTATAATTTGATCAAGTTGGTAGTGTATTGTGATCATCTTATTGCATTGTTAACTAGGATTGTGGAATTGATTGTGAAGAAATTGAGTGTTGAGCTACTGATTAAGGGATATGAATCATGTGGTATTGTGATTAGGGAGTGGCTAGTTATTTGCTATTTTGCATACTGGATTGGTTAGAAGGAAATATTTTGGGAGAACTAATTGAATTTGTTATGTTTGCATTGTCTCTTACACTAATGTCTAGTGTAATTGTGTTAACTGTGTCTGCAAGTAGTGCAACTGCATTAGTGTAGACGAATTATTAAGCAATTGCTTTTTTCTGTTGTTGGCTGGAGTCTTGGAATGTTTGAAAAGTGTTATGAATACCAAATAGTGTTGGGCTTGGCCGCGTGCCTTTGGCTAGAATCTCTTCATATGCAGGTTGGTTAGAAAGAAATCTTTGGTGATGAACTAAAGTTATCAGAATATTATTGGTATGGTCACAATCTACACCGTTGGTTAAGTAGATTTAATTGCCATCTTTTATGATTCTTGTAGCAAAGTAGAGTAGAGTATTCATTTCGAGTAATTCCACATGAAATCAAATTATGAGATGTCGTTAAGCTTGTGTCATTACTCTGATTAGGACTCACAGAGTCACAGGACATAGATGTCATGAAGTTTGATTAAGATTACTGGATTATGGAGGAGTCAGAGTTGACTTAGGAGAGGTTTTGCCCATGATTTGCCGAAACTTGCAACTTTATTACACAATTCAAGAAGTCTGTGTTTTATGGCTTCGTCTCTTATTCTCTTCATTGTTGAAGCCTGGTTGTTCAGATATTTCTCTTCAAACTTTTGAGGTGCTTCTACTGTCAGTAGTCCCAATTACAAATTGGATGCTTGGTAGTGTAACTATGTTCATCTTATGATGATGTGAATTTTAAGGTTGGAAATGACATTCCTCGTAGCCATGCTAGTAATTTCTTGGGTATTATTCCAGTCTAGGTTATGCAAGTGCCTACAAAATATCCATAGAAACATCCTTTGTGATTAACTGATTAAAGATGGCTTGGTTTTCCTTGGTCTTTTAAGATGACAGAATAAGGTTTACTCTAATATGTGGAGTATTTTCCTTGAATAAACTTCTTTAGTTTTGAAAAGAATGTGGGTATTTAAGAACCTTGGTTTTGCAAAAGTCTTTTTTCGGAGGGCTCCTGTGTTGCATCAATTTATGGAGTCTTTGATGCTGGAAAAACAGAAGCCTAGAAAGTGATTTTATTTTCATCATGTGTGTGATATGTCTAAAGACAAGATTGAGCCTCTAGTGATACAATATCATTTTTTTAATACTTTGACAATATATACTTCAAAATGATACAATATCATTGCTTATATTGAACCTGTGGATTCTTGCTTGTTGACGGGCATGTAAGTCTGTTCACTGTTGGAAATTATACCTGATCATCATGAGCCTGACCCAGCCTGTAAATAGCGGGTTTGGGCAGAATTCGTAGGCCCGTTTTCATGCCCGATCCGGCCTAGTCTGAAATTTTAATTTGTTGGTGGGTTTTGGGCAACTCAAAATTGCAATTTTAGTTATAAATTTGGCCCACCCTGAAAGGCCGCTATTTAGGCCCGAAAAATTGGGGTTTGGGCTGAAGTTTGGCTTGGCCCGAACCGCACCAACTTTGTGCTAATGAATTTTTAAGTCATGGCCCGGCCCGAACCCGACCCTGCCCGTATTTTGATCAGGTCTATTGGAAATCCGACCTTTGGCTATCTGGCTCATCAGGAGTCTCATAGGTCAGGTCAATGTTTCTTGTTCTCTAGTCTATTTGGAAGCAGCTCATACATTAGTAAAACAGTGTTAGTTATTAGAAGTTAACTTTTGCTTACACATAATTAAGCATGCTCATAACTTTGTGTCCTCTCTGGACTTTTGGCTTCAGTATCCTGTTCTCCGTTCAGTTATATTCTGAACGTTTTCTGATGAGAATTAATACTGCTGTATGTTACTTTTACCTGAAAATGGTAAATAATGGTTGGATACATGATACTACAAACAACCAGCAATTTTTATGTTACAGAACAAAAGCTATATGTTTTTCCTTTTCAAACATATTGATTCATGATTTACAGGAAGATTATACTGTATACTACTCCTATATTTCTTTGTGGCATGATTTCTTATCCAATTTCTTTTATCTTTGATTCCATTCTATACTTCTTAAAACATTACAGGTATAACATGGCATCGAACCGATGGTTTAAGGAGTCAACCGTCCCAAGAAAAGCACAAGACGGATCACAGTTTGGGTTCGTGGCACTTCAAGGAGAACTTCATGTGATCTCCCTCCTTCAAGGAGTTGAACTATCAGCAATTCGAAGATCTAGACATCGAAGAAGGGGTACTGTTCTGTTCATGCAAATTTACGACCCCAGAAACAAGTCTTGGAGATCACTCGTTACCAGGACACCTTTCCAGTTTCCATTGGATTTCAGAACTGCAGTTATGTGCACAATTCGTGTCTAG ATGGCGGGTTCATCATCAAAATTCCACCAAATTGATGAAACCCTAACTTTAATTCCGACCCTTCCTAACGATCTCTCTGCTTTGATCCTTTCTTTCATACCTTTCACCTTTCATGGCCGATTGAAGTCAACCTGTAAATCATGGCGTAATTTTTACTCTTCTAAAACCCCACTTTCTATCCGCCATGCTCATCTTCCACTTTCTTCACTTTCTCACCTCCTTTGCCTGTTTCCAGAAGACCCTTCTCTGTCCTCCCCTTATCTGTTTGACCCGACCCATTTGGCGTGGGCCCCACTTCCGCCCATGCCCATCAACCCGCATGTTTACTCTCTCTCTAATTTTGCGTCTCTTGCAATCGGACCGGAGCTTTATGTGCTGGGTGGGTCCCTCTTTGATACGCGGTCTTTCCCCATGGACCGCCCCGTCGCCTCCGCCGCTGTTTTCCGGTATGATCTCGCGGTTGGTGTGTGGGTCCAGCTTGCACCGATGATCACCCCACGTGGGTCCCACGCGGCGGTGGCTGTGGAGGAGGGGCGGGGGAGGATTGTGGTCGCGGGTGGTGGGTCTCGGCATGCGATGTTTGGTGCGGCGGGGACAAGGGTTGATGTTGCTGAAGTGTATGATGTTGAGAAGGATGAGTGGACATCACTCGCTGACCTCCCAGGTTCCCGGGCCGGGTGTGTGGGTTTCTGCGTGGGTAGTGGGAGGGAGTTATGGGTGATGGGTGGGTACGGCGAAGCAAGGACGATAAATGGCGTTTTGCCGGTGGATGAACACTATAAGGATGTGGTGGTGTTGGAATTGGAGAATGGTGGTGGTGGTGGTGGTGGTGGAGTGGAGCAGGGGAGGTGGAGAGAAATTGGGGATATGTGGGGTAATGAGGAGCGAGCTAGGCTTGGAAAGGTGGTTGTAATTGATGATGAAGGGGTGAAGAATTTGCCAAAGGTGTTTATGCTTGATGGAAATGACATTTTCAGGTATAACATGGCATCGAACCGATGGTTTAAGGAGTCAACCGTCCCAAGAAAAGCACAAGACGGATCACAGTTTGGGTTCGTGGCACTTCAAGGAGAACTTCATGTGATCTCCCTCCTTCAAGGAGTTGAACTATCAGCAATTCGAAGATCTAGACATCGAAGAAGGGGTACTGTTCTGTTCATGCAAATTTACGACCCCAGAAACAAGTCTTGGAGATCACTCGTTACCAGGACACCTTTCCAGTTTCCATTGGATTTCAGAACTGCAGTTATGTGCACAATTCGTGTCTAG ATGGCGGGTTCATCATCAAAATTCCACCAAATTGATGAAACCCTAACTTTAATTCCGACCCTTCCTAACGATCTCTCTGCTTTGATCCTTTCTTTCATACCTTTCACCTTTCATGGCCGATTGAAGTCAACCTGTAAATCATGGCGTAATTTTTACTCTTCTAAAACCCCACTTTCTATCCGCCATGCTCATCTTCCACTTTCTTCACTTTCTCACCTCCTTTGCCTGTTTCCAGAAGACCCTTCTCTGTCCTCCCCTTATCTGTTTGACCCGACCCATTTGGCGTGGGCCCCACTTCCGCCCATGCCCATCAACCCGCATGTTTACTCTCTCTCTAATTTTGCGTCTCTTGCAATCGGACCGGAGCTTTATGTGCTGGGTGGGTCCCTCTTTGATACGCGGTCTTTCCCCATGGACCGCCCCGTCGCCTCCGCCGCTGTTTTCCGGTATGATCTCGCGGTTGGTGTGTGGGTCCAGCTTGCACCGATGATCACCCCACGTGGGTCCCACGCGGCGGTGGCTGTGGAGGAGGGGCGGGGGAGGATTGTGGTCGCGGGTGGTGGGTCTCGGCATGCGATGTTTGGTGCGGCGGGGACAAGGGTTGATGTTGCTGAAGTGTATGATGTTGAGAAGGATGAGTGGACATCACTCGCTGACCTCCCAGGTTCCCGGGCCGGGTGTGTGGGTTTCTGCGTGGGTAGTGGGAGGGAGTTATGGGTGATGGGTGGGTACGGCGAAGCAAGGACGATAAATGGCGTTTTGCCGGTGGATGAACACTATAAGGATGTGGTGGTGTTGGAATTGGAGAATGGTGGTGGTGGTGGTGGTGGTGGAGTGGAGCAGGGGAGGTGGAGAGAAATTGGGGATATGTGGGGTAATGAGGAGCGAGCTAGGCTTGGAAAGGTGGTTGTAATTGATGATGAAGGGGTGAAGAATTTGCCAAAGGTGTTTATGCTTGATGGAAATGACATTTTCAGGTATAACATGGCATCGAACCGATGGTTTAAGGAGTCAACCGTCCCAAGAAAAGCACAAGACGGATCACAGTTTGGGTTCGTGGCACTTCAAGGAGAACTTCATGTGATCTCCCTCCTTCAAGGAGTTGAACTATCAGCAATTCGAAGATCTAGACATCGAAGAAGGGGTACTGTTCTGTTCATGCAAATTTACGACCCCAGAAACAAGTCTTGGAGATCACTCGTTACCAGGACACCTTTCCAGTTTCCATTGGATTTCAGAACTGCAGTTATGTGCACAATTCGTGTCTAG MAGSSSKFHQIDETLTLIPTLPNDLSALILSFIPFTFHGRLKSTCKSWRNFYSSKTPLSIRHAHLPLSSLSHLLCLFPEDPSLSSPYLFDPTHLAWAPLPPMPINPHVYSLSNFASLAIGPELYVLGGSLFDTRSFPMDRPVASAAVFRYDLAVGVWVQLAPMITPRGSHAAVAVEEGRGRIVVAGGGSRHAMFGAAGTRVDVAEVYDVEKDEWTSLADLPGSRAGCVGFCVGSGRELWVMGGYGEARTINGVLPVDEHYKDVVVLELENGGGGGGGGVEQGRWREIGDMWGNEERARLGKVVVIDDEGVKNLPKVFMLDGNDIFRYNMASNRWFKESTVPRKAQDGSQFGFVALQGELHVISLLQGVELSAIRRSRHRRRGTVLFMQIYDPRNKSWRSLVTRTPFQFPLDFRTAVMCTIRV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo02405.1 vs. NCBI nr
Match: gi|902228136|gb|KNA20985.1| (hypothetical protein SOVF_047360 [Spinacia oleracea]) HSP 1 Score: 857.4 bits (2214), Expect = 1.000e-245 Identity = 421/422 (99.76%), Postives = 421/422 (99.76%), Query Frame = 1
BLAST of Spo02405.1 vs. NCBI nr
Match: gi|731336350|ref|XP_010679207.1| (PREDICTED: F-box/kelch-repeat protein OR23 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 635.6 bits (1638), Expect = 6.300e-179 Identity = 314/413 (76.03%), Postives = 352/413 (85.23%), Query Frame = 1
BLAST of Spo02405.1 vs. NCBI nr
Match: gi|1009147410|ref|XP_015891396.1| (PREDICTED: F-box/kelch-repeat protein OR23 [Ziziphus jujuba]) HSP 1 Score: 533.5 bits (1373), Expect = 3.400e-148 Identity = 257/416 (61.78%), Postives = 323/416 (77.64%), Query Frame = 1
BLAST of Spo02405.1 vs. NCBI nr
Match: gi|645260204|ref|XP_008235722.1| (PREDICTED: F-box/kelch-repeat protein OR23 [Prunus mume]) HSP 1 Score: 532.7 bits (1371), Expect = 5.800e-148 Identity = 261/421 (62.00%), Postives = 318/421 (75.53%), Query Frame = 1
BLAST of Spo02405.1 vs. NCBI nr
Match: gi|595792285|ref|XP_007199891.1| (hypothetical protein PRUPE_ppa006564mg [Prunus persica]) HSP 1 Score: 532.7 bits (1371), Expect = 5.800e-148 Identity = 260/415 (62.65%), Postives = 316/415 (76.14%), Query Frame = 1
BLAST of Spo02405.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RN91_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_047360 PE=4 SV=1) HSP 1 Score: 857.4 bits (2214), Expect = 7.100e-246 Identity = 421/422 (99.76%), Postives = 421/422 (99.76%), Query Frame = 1
BLAST of Spo02405.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F3K0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g120760 PE=4 SV=1) HSP 1 Score: 635.6 bits (1638), Expect = 4.400e-179 Identity = 314/413 (76.03%), Postives = 352/413 (85.23%), Query Frame = 1
BLAST of Spo02405.1 vs. UniProtKB/TrEMBL
Match: M5W2T5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006564mg PE=4 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 4.000e-148 Identity = 260/415 (62.65%), Postives = 316/415 (76.14%), Query Frame = 1
BLAST of Spo02405.1 vs. UniProtKB/TrEMBL
Match: A0A059D2J1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01523 PE=4 SV=1) HSP 1 Score: 510.0 bits (1312), Expect = 2.800e-141 Identity = 250/421 (59.38%), Postives = 314/421 (74.58%), Query Frame = 1
BLAST of Spo02405.1 vs. UniProtKB/TrEMBL
Match: M1D3V0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400031427 PE=4 SV=1) HSP 1 Score: 507.7 bits (1306), Expect = 1.400e-140 Identity = 246/409 (60.15%), Postives = 307/409 (75.06%), Query Frame = 1
BLAST of Spo02405.1 vs. ExPASy Swiss-Prot
Match: FK125_ARATH (F-box/kelch-repeat protein OR23 OS=Arabidopsis thaliana GN=OR23 PE=2 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 9.200e-130 Identity = 230/424 (54.25%), Postives = 297/424 (70.05%), Query Frame = 1
BLAST of Spo02405.1 vs. ExPASy Swiss-Prot
Match: FBK46_ARATH (F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana GN=At2g44130 PE=2 SV=2) HSP 1 Score: 74.3 bits (181), Expect = 3.500e-12 Identity = 71/268 (26.49%), Postives = 104/268 (38.81%), Query Frame = 1
BLAST of Spo02405.1 vs. ExPASy Swiss-Prot
Match: FBK8_ARATH (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana GN=At1g22040 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 8.900e-8 Identity = 61/253 (24.11%), Postives = 100/253 (39.53%), Query Frame = 1
BLAST of Spo02405.1 vs. ExPASy Swiss-Prot
Match: KLH34_HUMAN (Kelch-like protein 34 OS=Homo sapiens GN=KLHL34 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.400e-6 Identity = 48/158 (30.38%), Postives = 68/158 (43.04%), Query Frame = 1
BLAST of Spo02405.1 vs. TAIR (Arabidopsis)
Match: AT4G03030.1 (Galactose oxidase/kelch repeat superfamily protein) HSP 1 Score: 464.9 bits (1195), Expect = 5.200e-131 Identity = 230/424 (54.25%), Postives = 297/424 (70.05%), Query Frame = 1
BLAST of Spo02405.1 vs. TAIR (Arabidopsis)
Match: AT2G44130.1 (Galactose oxidase/kelch repeat superfamily protein) HSP 1 Score: 74.3 bits (181), Expect = 2.000e-13 Identity = 71/268 (26.49%), Postives = 104/268 (38.81%), Query Frame = 1
BLAST of Spo02405.1 vs. TAIR (Arabidopsis)
Match: AT1G22040.1 (Galactose oxidase/kelch repeat superfamily protein) HSP 1 Score: 59.7 bits (143), Expect = 5.000e-9 Identity = 61/253 (24.11%), Postives = 100/253 (39.53%), Query Frame = 1
BLAST of Spo02405.1 vs. TAIR (Arabidopsis)
Match: AT1G80440.1 (Galactose oxidase/kelch repeat superfamily protein) HSP 1 Score: 51.2 bits (121), Expect = 1.800e-6 Identity = 66/240 (27.50%), Postives = 95/240 (39.58%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02405.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02405.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02405.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 4
BLAST of Spo02405.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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