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Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGTCTTTACACAAAATTATTAAAAAAACGGCACATTTCTGGAATCTTCCACGTCATCATCCTCGTCTTTAATCACCGCCTTCATAGAAACGGGTAGAAGAAGAAGACGACGACTTCTCAAGAACTTTCGTTCATCCTTTTCTCTCTCCACAAAACCCCACCAAATTCCCACTCTTTCGCTATCATAAAAAAGGAAACCTAAAAAACTAGGAAACTCCAAACCCCATTTTCTGTCTCTCCTCTGAAACAAGCAAGAAATCGTCATTCATTCATCATGTGGCAACAAGCGAGCAGGAAATATGATATTGAAGGAGGATCACAACAATTGTACCCTGTGATGCTCGAGAACCCAGAACTTCGATGGAGTTTTATCAGAAAAGTTTACTCAATCATCGCAATACAGTTGCTGGCTACCATTGCTGTTGGTGCTGTTGTTGTTTCGTATGAACCTATTGCCCTTTTCTTTACTTCTAGTAGTGGTGGTCTCGCTTGCTATATCATCCTCATCATCACTCCTTTTATTGGTATTAACTCTCTCTCTCTCTCTCTCTTTTTGATCTTGGGATTTATTTTTGGTGATTTTTATGTTGGAATTTGATCGAATTGAACTGGGGTTTTGATGGTTTTTTGTTACCCGTCTTTTGAATTTTTAGCTGTTGGATTGAAATTGGGGTTGATTGTTATTGTTGACTTGTAGATGTGGACTTGTTGGTTGATTGCAATTGTTGACTCCGTATTATTTTTTGGAGGAATTTACTAGAAATTGACATCCTTTTTCATGGGTTTCTTGTAGTGTTTTTGGGCATTAGTTGTTTTCTTTGGTGATTTTGCTTGTAAATGATTAAAATGGGGAATTTTATTGGAATTGTTGATCATTTTGATATATTGTGAAACTTTAACTCATTTTACTGGATTTTAGTGAATTTTTTTGTTTAGAAATAGTTCGTTAGGTTTGTCTTTCATGTGATGTTTGTGGGGATTAGTTGTTTTCTTTGGTGATTTTGCTTGTAAATGATTAGAATGGGGAATTTTATTGGAATTGTTCATCATTTTGATATATTCTAATTTTTTTTACTCATTTTGCTGGATTATTGTGAATTTATTGTTTAGAAATTGTTTGGCTTTCTTGTTATTTCTAATTTGGTGCTATTGTTGTGGATTGTAGTGCTATGTCCTTTGTATTACTATCATCAAAGTCATCCATTGAATTACATACTGCTTGGAATCTTCACTATCACACTTGCCTTCTCTGTTGGGTTGACATGTGCATTCACTAGTGGTAAGTTCTTCTCGGCGCGGTTTCGTTTATTTAAGTTTTCATTTGCAGCTGATGAATTGAATTTAACTTGAATTGAAATGAATGTGACATGACATTTATGTCTTGATGTTATCTTAGTTTATTAATCAACCGAATGCTTTTGTTTTAAGTATCTTGGGTTGGCAAACTTTGAGGGAAAGATAAATGACTTTCTTGCAAGCAACCATTGTTGATTGTTCTTTGCTGTCTTTATGTTTTTAATTCAAATGGTTGCAATTACTTGCATTCTGAGTATCTGATACTGGATCAGAATTGAAGGTTTCATTTGATATGAACATGTAGACATCAATAATATTACCTTCACATTGCTACATATTACTATCAAACAAGACCTATGGACTTCATATAATCATATCCTTTGTTACCTAGACTCGGATACCCATATTGGACACGTACAAGTGTCTGACACGGCTAATTTGGGAAAAAATTGCTATGATTCTGGTCCAAAATGAAAGTGTCCATACCCATGTCCGAGTAGATCATATTACCCTCACATTGCTGAATATATATTACTTTCCAGCGGATGGACTGAATTTCCGCACTTGCATCCTAGTGATTTGTCGTTGGGGGTAGTGTACATATGTTTCAGAATCTAGTTTGGTTATAGTAAGCCGCATCTATGGTGAACTTGTGGAGGTGGTTTTATAGTGTGCTTTGTAGGAAATATTGACATGAAAAGTTAGGAGTTTCCCATGGCTTGAAAAGTCTGATGCTGGAGATTGTGATATTGAATTTGTGAGAAGCCCACCTCTGTTTAGATTTAAGTTTTGCGCTACTGATGAATGATAGATTGTTGCAGAGATGGTTTTCTTTTATTGAGAACTTCCTTTTTGTCGTGGAAAAATTAGCTGAATTGGTAACTTGCACAATGTAAGCTATGGCATGAACTTACCGGAGCTTTTATAATTTATAGGGAAAGTCATTTTGGAGTCCGTGATTCTGACAACTGCAGTGGTTCTAAGTCTCACTGCCTACACTTTCTGGGCAGCAAAGAGAGGCCATGACTTCAACTTCCTTGGCCCTTTCTTGTTCGGAGCTTTGATTGTACTAATCATCTTTTCCATGATTCAGGTATAATCACCTTTCAGATGTTTTTCTCTTTCCAAAAGTTTGTGATAAACCCACCGGGCCATACACGAGCCCGTACACGAGAAGAGACTGATCACATATAAGTCTGATTGGATTCCATCCTAAAACCAATTGGTTATAGGTTGAGTAACCCATCAATCTTGTATGTTTAGTCAATCTCTTCCAACTCATATTTGGGTTAATCTTCTCAACAGTTTGTTTGTTCAACAATGCTAAATCCCGTAAATTACTTGATTGCAGATATTCTTTCCATTGGGCAAAATTGGTGTAATGATCTATGGTTGTGTGGCATCGATCATATTCTGTGGCTACATCGTTTATGACACGGATAACCTCATCAAACGATACACCTACGACGAGTACATATGGGCTGCTATTGCGTTGTATCTCGACATTATCAACCTCTTCCTTTCTCTGCTAACTGTTTTCAGAGCTGCTGACAGTTAGGTGGACTTTTGCCATTGTATTTGTGTTTGTAAACCATGTTAAGAAAATGTTAACCAGTTTGTAAGTACATATTACTTCAATTTTAGCAGGAGAAATTTTTATACTATGGGAAAAAAAAAAATTGTACACGGATTTCTTTTCCGAATTTTACTGGTTGCCTGGGTTGAATGAGATGCAACATATAGTTGTGAACAAGCTCCTTTGTAGCCATTTTGTGTATTATGTTACCTACTTAAAAACTAAGGAAAGTTATTAGAAGAAACAAATAAAGTTGAAGCTGTTCTTGCTAGGACATGTGTTTGGTGAACTCTGTCACGGTCAACGTTGTTGATACAGCACTAGTCAAAGTTCATTTCAATCTTTTTGATCTTCTGAAGCGTCCATTTTAGCTGCATATCTGAACTTCCCTCTCGTTGTAACAAATCAATAAGCTTTTTCGAATTTGTAAGGATCGTTACTCTTTATATATTGACTTTGCGAAGTCCATTGTAGACCCAGTAGGCACGCATTGGCTTCCGTTTGTAGAGCAGAGGCAGCTGAACAAGTTTGTGCCAGTCTTTACACAAAATTATTAAAAAAACGGCACATTTCTGGAATCTTCCACGTCATCATCCTCGTCTTTAATCACCGCCTTCATAGAAACGGGTAGAAGAAGAAGACGACGACTTCTCAAGAACTTTCGTTCATCCTTTTCTCTCTCCACAAAACCCCACCAAATTCCCACTCTTTCGCTATCATAAAAAAGGAAACCTAAAAAACTAGGAAACTCCAAACCCCATTTTCTGTCTCTCCTCTGAAACAAGCAAGAAATCGTCATTCATTCATCATGTGGCAACAAGCGAGCAGGAAATATGATATTGAAGGAGGATCACAACAATTGTACCCTGTGATGCTCGAGAACCCAGAACTTCGATGGAGTTTTATCAGAAAAGTTTACTCAATCATCGCAATACAGTTGCTGGCTACCATTGCTGTTGGTGCTGTTGTTGTTTCGTATGAACCTATTGCCCTTTTCTTTACTTCTAGTAGTGGTGGTCTCGCTTGCTATATCATCCTCATCATCACTCCTTTTATTGTGCTATGTCCTTTGTATTACTATCATCAAAGTCATCCATTGAATTACATACTGCTTGGAATCTTCACTATCACACTTGCCTTCTCTGTTGGGTTGACATGTGCATTCACTAGTGGGAAAGTCATTTTGGAGTCCGTGATTCTGACAACTGCAGTGGTTCTAAGTCTCACTGCCTACACTTTCTGGGCAGCAAAGAGAGGCCATGACTTCAACTTCCTTGGCCCTTTCTTGTTCGGAGCTTTGATTGTACTAATCATCTTTTCCATGATTCAGATATTCTTTCCATTGGGCAAAATTGGTGTAATGATCTATGGTTGTGTGGCATCGATCATATTCTGTGGCTACATCGTTTATGACACGGATAACCTCATCAAACGATACACCTACGACGAGTACATATGGGCTGCTATTGCGTTGTATCTCGACATTATCAACCTCTTCCTTTCTCTGCTAACTGTTTTCAGAGCTGCTGACAGTTAGGTGGACTTTTGCCATTGTATTTGTGTTTGTAAACCATGTTAAGAAAATGTTAACCAGTTTGTAAGTACATATTACTTCAATTTTAGCAGGAGAAATTTTTATACTATGGGAAAAAAAAAAATTGTACACGGATTTCTTTTCCGAATTTTACTGGTTGCCTGGGTTGAATGAGATGCAACATATAGTTGTGAACAAGCTCCTTTGTAGCCATTTTGTGTATTATGTTACCTACTTAAAAACTAAGGAAAGTTATTAGAAGAAACAAATAAAGTTGAAGCTGTTCTTGCTAGGACATGTGTTTGGTGAACTCTGTCACGGTCAACGTTGTTGATACAGCACTAGTCAAAGTTCATTTCAATCTTTTTGATCTTCTGAAGCGTCCATTTTAGCTGCATATCTGAACTTCCCTCTCGTTGTAACAAATCAATAAGCTTTTTCGAATTTGTAAGGATCGTTACTCTTTATATATTGACTTTGCGAAGTCCATTGTAGACCCAGTAGGCACGCATTGGCTTCCGTTTGTAGAGCAGAGGCAGCTGAACAAGTTTGTGC ATGTGGCAACAAGCGAGCAGGAAATATGATATTGAAGGAGGATCACAACAATTGTACCCTGTGATGCTCGAGAACCCAGAACTTCGATGGAGTTTTATCAGAAAAGTTTACTCAATCATCGCAATACAGTTGCTGGCTACCATTGCTGTTGGTGCTGTTGTTGTTTCGTATGAACCTATTGCCCTTTTCTTTACTTCTAGTAGTGGTGGTCTCGCTTGCTATATCATCCTCATCATCACTCCTTTTATTGTGCTATGTCCTTTGTATTACTATCATCAAAGTCATCCATTGAATTACATACTGCTTGGAATCTTCACTATCACACTTGCCTTCTCTGTTGGGTTGACATGTGCATTCACTAGTGGGAAAGTCATTTTGGAGTCCGTGATTCTGACAACTGCAGTGGTTCTAAGTCTCACTGCCTACACTTTCTGGGCAGCAAAGAGAGGCCATGACTTCAACTTCCTTGGCCCTTTCTTGTTCGGAGCTTTGATTGTACTAATCATCTTTTCCATGATTCAGATATTCTTTCCATTGGGCAAAATTGGTGTAATGATCTATGGTTGTGTGGCATCGATCATATTCTGTGGCTACATCGTTTATGACACGGATAACCTCATCAAACGATACACCTACGACGAGTACATATGGGCTGCTATTGCGTTGTATCTCGACATTATCAACCTCTTCCTTTCTCTGCTAACTGTTTTCAGAGCTGCTGACAGTTAG MWQQASRKYDIEGGSQQLYPVMLENPELRWSFIRKVYSIIAIQLLATIAVGAVVVSYEPIALFFTSSSGGLACYIILIITPFIVLCPLYYYHQSHPLNYILLGIFTITLAFSVGLTCAFTSGKVILESVILTTAVVLSLTAYTFWAAKRGHDFNFLGPFLFGALIVLIIFSMIQIFFPLGKIGVMIYGCVASIIFCGYIVYDTDNLIKRYTYDEYIWAAIALYLDIINLFLSLLTVFRAADS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo02356.1 vs. NCBI nr
Match: gi|902151423|gb|KNA05528.1| (hypothetical protein SOVF_189500 [Spinacia oleracea]) HSP 1 Score: 464.2 bits (1193), Expect = 1.400e-127 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1
BLAST of Spo02356.1 vs. NCBI nr
Match: gi|731336174|ref|XP_010679114.1| (PREDICTED: BI1-like protein [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 412.9 bits (1060), Expect = 3.800e-112 Identity = 215/249 (86.35%), Postives = 230/249 (92.37%), Query Frame = 1
BLAST of Spo02356.1 vs. NCBI nr
Match: gi|848849818|ref|XP_012831732.1| (PREDICTED: BI1-like protein [Erythranthe guttata]) HSP 1 Score: 392.1 bits (1006), Expect = 7.000e-106 Identity = 197/243 (81.07%), Postives = 224/243 (92.18%), Query Frame = 1
BLAST of Spo02356.1 vs. NCBI nr
Match: gi|694383235|ref|XP_009367582.1| (PREDICTED: BI1-like protein [Pyrus x bretschneideri]) HSP 1 Score: 391.0 bits (1003), Expect = 1.500e-105 Identity = 196/242 (80.99%), Postives = 220/242 (90.91%), Query Frame = 1
BLAST of Spo02356.1 vs. NCBI nr
Match: gi|645259452|ref|XP_008235367.1| (PREDICTED: BI1-like protein [Prunus mume]) HSP 1 Score: 388.7 bits (997), Expect = 7.700e-105 Identity = 196/244 (80.33%), Postives = 219/244 (89.75%), Query Frame = 1
BLAST of Spo02356.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFR5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_189500 PE=3 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 1.000e-127 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1
BLAST of Spo02356.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F3B7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g119910 PE=3 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 2.700e-112 Identity = 215/249 (86.35%), Postives = 230/249 (92.37%), Query Frame = 1
BLAST of Spo02356.1 vs. UniProtKB/TrEMBL
Match: A0A022S579_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv11b010581mg PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 4.800e-106 Identity = 197/243 (81.07%), Postives = 224/243 (92.18%), Query Frame = 1
BLAST of Spo02356.1 vs. UniProtKB/TrEMBL
Match: A0A067JN13_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21881 PE=3 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 1.200e-104 Identity = 194/242 (80.17%), Postives = 218/242 (90.08%), Query Frame = 1
BLAST of Spo02356.1 vs. UniProtKB/TrEMBL
Match: M5VKA6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010573mg PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 2.000e-104 Identity = 196/244 (80.33%), Postives = 218/244 (89.34%), Query Frame = 1
BLAST of Spo02356.1 vs. ExPASy Swiss-Prot
Match: BI1L_ARATH (BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 7.800e-65 Identity = 133/244 (54.51%), Postives = 182/244 (74.59%), Query Frame = 1
BLAST of Spo02356.1 vs. ExPASy Swiss-Prot
Match: LFG4_MOUSE (Protein lifeguard 4 OS=Mus musculus GN=Tmbim4 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.900e-23 Identity = 73/214 (34.11%), Postives = 125/214 (58.41%), Query Frame = 1
BLAST of Spo02356.1 vs. ExPASy Swiss-Prot
Match: LFG4_HUMAN (Protein lifeguard 4 OS=Homo sapiens GN=TMBIM4 PE=1 SV=3) HSP 1 Score: 107.1 bits (266), Expect = 2.800e-22 Identity = 75/214 (35.05%), Postives = 119/214 (55.61%), Query Frame = 1
BLAST of Spo02356.1 vs. ExPASy Swiss-Prot
Match: BXI1_SCHPO (Bax inhibitor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bxi1 PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.800e-22 Identity = 72/209 (34.45%), Postives = 117/209 (55.98%), Query Frame = 1
BLAST of Spo02356.1 vs. ExPASy Swiss-Prot
Match: GAAP_VACCL (Golgi anti-apoptotic protein OS=Vaccinia virus (strain Lister) GN=L6 PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.800e-21 Identity = 74/218 (33.94%), Postives = 124/218 (56.88%), Query Frame = 1
BLAST of Spo02356.1 vs. TAIR (Arabidopsis)
Match: AT1G03070.1 (Bax inhibitor-1 family protein) HSP 1 Score: 368.6 bits (945), Expect = 2.900e-102 Identity = 185/244 (75.82%), Postives = 215/244 (88.11%), Query Frame = 1
BLAST of Spo02356.1 vs. TAIR (Arabidopsis)
Match: AT3G63310.1 (Bax inhibitor-1 family protein) HSP 1 Score: 364.4 bits (934), Expect = 5.500e-101 Identity = 183/242 (75.62%), Postives = 211/242 (87.19%), Query Frame = 1
BLAST of Spo02356.1 vs. TAIR (Arabidopsis)
Match: AT4G02690.1 (Bax inhibitor-1 family protein) HSP 1 Score: 351.3 bits (900), Expect = 4.800e-97 Identity = 181/242 (74.79%), Postives = 204/242 (84.30%), Query Frame = 1
BLAST of Spo02356.1 vs. TAIR (Arabidopsis)
Match: AT4G14730.1 (Bax inhibitor-1 family protein) HSP 1 Score: 258.8 bits (660), Expect = 3.200e-69 Identity = 126/230 (54.78%), Postives = 178/230 (77.39%), Query Frame = 1
BLAST of Spo02356.1 vs. TAIR (Arabidopsis)
Match: AT4G15470.1 (Bax inhibitor-1 family protein) HSP 1 Score: 248.4 bits (633), Expect = 4.400e-66 Identity = 133/244 (54.51%), Postives = 182/244 (74.59%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02356.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02356.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02356.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo02356.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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