Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTGAGCTTCTGGAGGCTGGCCCTCTCGCCGTAGGATATCTTTCTACAGGCGACCGTATCTTGCATTTGAACTTCAAGGTTAAGGAAAAGGGCTTATCCGGTGTGCAGACCTTTTTTTCTGAGCTGATAGAAACTAAAAAAAGTACTCTGCATGGGGACAAGTGACATACTACCAGGTTATACACTCTTTGAACCCATGTATACTTGATTACTTGATCTCATTGTTCTACTCTCTTGGTGTGGATGACTTTGTTTACTATGTAGTAGAAAATTTCTGCACTATCATTACCATTAGATGATCCTTTTTGCCATTTCGGTTACACTTGTTGCAGAGAAAGCTGATACTCACGGTTGCCTCTATTGTTGTTCTCGCGATATTCACCATCCTGCTGACATCTGTAGCTTCCGAAGTGGCGGGGAACCTCATTTTGATACCTTGTGTTCCAAACTCAAGGAGTTCAATAAGTACTTGGAGAAGGGTATACTGAGGTGGTTGTTTTCTTTATTGTTAACCAATTCTTTGGTATTACTGTACTAATTATCTTGCATTTTTTTTACTGATCTTCCTTACTAGCTTCATATAGCTCTATCATTTGTGTTCTGAATGTTATATTATGGTTGTCCATAATCTGACTTGATTTAGTCAAACAGTTAGATACGGATAGGATTATCTTAGTTGAAATTCACTACTCAACTAGTCTACAAGGAAGTGGATATAAACTATTTTTAAGCTAATTATTTTGTGAAATGTTATTGGCATGAATATGTCCTGATTGAATGTCGTTTTTTCAATTGCTAAAAAGAAAACGCAAAGACAAAGAAGACCTCTCTCTTAGGTTCCCGGATCTCGGACTCGAGTACAGGGGCAACAACACTTGTACGGACATGATAGCTAGAAATGCATCTGTAGCCTTGCGCTTGTTCAATGGAGAGAAGGTGTGGTTTTCTTCTCCTGAAAATAGTTCAGTTCCCATTTGTTGTATTGCCTTGTTTTTTCGTGGGTCCACGTAATTATATTATTATATTATTAATATATACCTGGCTTATGAATGAACTTTTCAGGGTTCAAACTTTGAGCTTGTGAAGATTGGCCGGTTTGAAATAGTAGTGTTGGGGTTTGGGTTCCTCCAGCATATGAACTTTGAGGCAAAGAACAAAGACGATCCTGATGCTGAGGTGATGACTTTTTTTGCGGAAGTGATCAGAAGGGCCAGATATTTCTTCGTTGACTTTTGCCAATGCTTGGGCCCATCTTTTCTCCTACCAGGTATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTCTAAATTATATTTCTATTTAAACTGTAATTCATGTTAAAAATAATTTACAATTAAGTAAACCGCCATCTGAGATAGCGGTTTTGTTTTAATACAAACCGCTATCTGAGATAGCGGTTTATAACATTGAACCGCCATCTGAGATGGCGGTTTGCTTTAAAACGAAACCGCTATCTCATATAGCGGTTCAATGCTGAACCGGAAAAAAAAATTACTTCTCTTTCTCCCTTGCTTACGTGGACGGTATGGTGGGAAATAACTTAAAAAGTAACGTATTTAGGGAATTGTTGGATCTTTATGCAATATTGAAGGAAATCGCTCTGTTTCTTTACATGGAAATTGATCGTGTTATGTGGAGTAGTTCAATGATCAATTATAATAAAAGTGTTTTGAATTTGAAATCTAGGGTGTAAATGGGTTTTTTGGAGGGAGTGAATGAGAATACTTAGATGAGGATTTGGAGGCCTCTCATTTAAATTGATATTCTTATTACGAAGTATTATATAAGAATAGTTGGTAGATAAACATTGTAAAGGATTACATAATTAATTTTATACATTATTAGAAAATTTGAAGAAATAATATTTATTAAAATGAAATTTTTTATCACTAAAGAATAGATAACTTTTACATATAGAAAGGTAACTTTTAAACATTTTGAGTTAACTTTTACTCTGGTATACAATATTTATTGTACACCACTTGTAAATAAGAATTTGTGATGTTACATTATGGTTGTCCATAATCTGACTTGACGTAGTCAAACAGTTAGATACGGAGTAGGATTATCTTAGTTGAAATGCACTACTCAACTAGTCTACGTCTACACAGGGCCGGTCCTGACATTTTAGGGGCCCATGGCGAATCACGATAAGGGGTCTCAAGGGGGCCCTTATATATGGTGTGAGGTCTTAAAATATTCACTGTATGTACATATTACATATGGCATTTCGAGTATATTTATTTCTCCTTTAAATATTTGAACCATATTTAACAACACATATGAATATACAATGCCATATTTTACGTATTTCTTAATGACACAATGTATAAAAATTTGCACGTACTACGTATTTCTTAATGACACAATATTTTATAAAATTTGCACATAAATATTTTGTTTATAGAACCCATAAAAATAAGTCCATTTAAAGAAGAAGAGGATTAATATCAAAATAAACAGAGAAAATCAAAACCTCCAAAAAATGTTAACAAAATTTCAGCTATTGGGTTTCGTACCCCTGTTGTTTGAGAGATATTTAATAGGATTCAACCAACTAGCCACTAGCATTCTATGATTAATATTTGTGTTTATAATTTATTTAACGTATAATACAGTTGTATATTTTGGGGCCCTTTGTCCTCGGGGGCCCTGGGCGGCCGCCCCTCAATTCAACCCCCACGGACGGGCCTGAGTCTACAAGGAAGTAGATATAAACTATTTTTAAGCTAATTATTTTGTGAAGTGTTATTGGCATGCATATGTCCTGATTGATTTTCGTTTTTTCAATTGTTAAAAAGAAAACGCAAAGAGAAAGAAGACCCCTCGTTTTTTCAATTACTAATATCTCGATGTAATCTTATACTACATGATTGATTATCTTTCAGATGATCATGAAGTTGAAGCTGAACTTCAAGGCTACTGTTATTGTAAATGTATTCATCATCCTCCTAGTCCAGGGTACCTCATTGGACGGGAATTAG TTTGAGCTTCTGGAGGCTGGCCCTCTCGCCGTAGGATATCTTTCTACAGGCGACCGTATCTTGCATTTGAACTTCAAGGTTAAGGAAAAGGGCTTATCCGGTGTGCAGACCTTTTTTTCTGAGCTGATAGAAACTAAAAAAAGTACTCTGCATGGGGACAAGTGACATACTACCAGAGAAAGCTGATACTCACGGTTGCCTCTATTGTTGTTCTCGCGATATTCACCATCCTGCTGACATCTGTAGCTTCCGAAGTGGCGGGGAACCTCATTTTGATACCTTGTGTTCCAAACTCAAGGAGTTCAATAAGTACTTGGAGAAGGGTATACTGAGAAAACGCAAAGACAAAGAAGACCTCTCTCTTAGGTTCCCGGATCTCGGACTCGAGTACAGGGGCAACAACACTTGTACGGACATGATAGCTAGAAATGCATCTGTAGCCTTGCGCTTGTTCAATGGAGAGAAGGGTTCAAACTTTGAGCTTGTGAAGATTGGCCGGTTTGAAATAGTAGTGTTGGGGTTTGGGTTCCTCCAGCATATGAACTTTGAGGCAAAGAACAAAGACGATCCTGATGCTGAGATGATCATGAAGTTGAAGCTGAACTTCAAGGCTACTGTTATTGTAAATGTATTCATCATCCTCCTAGTCCAGGGTACCTCATTGGACGGGAATTAG ATGGGGACAAGTGACATACTACCAGAGAAAGCTGATACTCACGGTTGCCTCTATTGTTGTTCTCGCGATATTCACCATCCTGCTGACATCTGTAGCTTCCGAAGTGGCGGGGAACCTCATTTTGATACCTTGTGTTCCAAACTCAAGGAGTTCAATAAGTACTTGGAGAAGGGTATACTGAGAAAACGCAAAGACAAAGAAGACCTCTCTCTTAGGTTCCCGGATCTCGGACTCGAGTACAGGGGCAACAACACTTGTACGGACATGATAGCTAGAAATGCATCTGTAGCCTTGCGCTTGTTCAATGGAGAGAAGGGTTCAAACTTTGAGCTTGTGAAGATTGGCCGGTTTGAAATAGTAGTGTTGGGGTTTGGGTTCCTCCAGCATATGAACTTTGAGGCAAAGAACAAAGACGATCCTGATGCTGAGATGATCATGAAGTTGAAGCTGAACTTCAAGGCTACTGTTATTGTAAATGTATTCATCATCCTCCTAGTCCAGGGTACCTCATTGGACGGGAATTAG MGTSDILPEKADTHGCLYCCSRDIHHPADICSFRSGGEPHFDTLCSKLKEFNKYLEKGILRKRKDKEDLSLRFPDLGLEYRGNNTCTDMIARNASVALRLFNGEKGSNFELVKIGRFEIVVLGFGFLQHMNFEAKNKDDPDAEMIMKLKLNFKATVIVNVFIILLVQGTSLDGN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo02274.1 vs. NCBI nr
Match: gi|902204739|gb|KNA14962.1| (hypothetical protein SOVF_102600 [Spinacia oleracea]) HSP 1 Score: 306.2 bits (783), Expect = 3.600e-80 Identity = 143/145 (98.62%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of Spo02274.1 vs. NCBI nr
Match: gi|902188410|gb|KNA11144.1| (hypothetical protein SOVF_138000 [Spinacia oleracea]) HSP 1 Score: 133.3 bits (334), Expect = 4.200e-28 Identity = 63/144 (43.75%), Postives = 96/144 (66.67%), Query Frame = 1
BLAST of Spo02274.1 vs. NCBI nr
Match: gi|731319863|ref|XP_010670497.1| (PREDICTED: uncharacterized protein LOC104887544 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 120.2 bits (300), Expect = 3.700e-24 Identity = 64/159 (40.25%), Postives = 93/159 (58.49%), Query Frame = 1
BLAST of Spo02274.1 vs. NCBI nr
Match: gi|870866101|gb|KMT17120.1| (hypothetical protein BVRB_2g041740 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 120.2 bits (300), Expect = 3.700e-24 Identity = 64/159 (40.25%), Postives = 93/159 (58.49%), Query Frame = 1
BLAST of Spo02274.1 vs. NCBI nr
Match: gi|731350527|ref|XP_010686548.1| (PREDICTED: uncharacterized protein LOC104900742 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 93.6 bits (231), Expect = 3.700e-16 Identity = 58/145 (40.00%), Postives = 79/145 (54.48%), Query Frame = 1
BLAST of Spo02274.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R848_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_102600 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 2.500e-80 Identity = 143/145 (98.62%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of Spo02274.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QV64_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_138000 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.900e-28 Identity = 63/144 (43.75%), Postives = 96/144 (66.67%), Query Frame = 1
BLAST of Spo02274.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTQ3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g041740 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.600e-24 Identity = 64/159 (40.25%), Postives = 93/159 (58.49%), Query Frame = 1
BLAST of Spo02274.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BWH1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g183640 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.600e-16 Identity = 58/145 (40.00%), Postives = 79/145 (54.48%), Query Frame = 1
BLAST of Spo02274.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EMQ8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g183620 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.200e-15 Identity = 57/144 (39.58%), Postives = 76/144 (52.78%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02274.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02274.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02274.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo02274.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
RNA-Seq Expression
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