Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACGTGATCAAGTACTCGTAGTAGCTCAGTAGGGAATGTATTCCTGGGTTTGAATATTTGGGATTTCCGTGACAGGTTTGAAAGATAATCTTCACTACAGCCTAAAAATGGCAGCTCTTCCACTTATTTCCCTCTCTCATCCCTTGCAAACCCATCTTCTTCACTTGCCCTCAACAAAATCCCAGCTCCATAGTCCAATATCATACCCTAAACTCTCATCCGGTGTTCTCCAATCAGTTAAATTTCGCAATAATTCTGCAAAATTGAGAAGCAAGTCCAATGACCCAGTTGAGGCTGACCCTTTGTTCAAAGATCAAGACGGCGTCGTCAGTGATATGGAAGGTTATCTCAATTCTCTCTCCCTCGAGTATGATTCTGTTTGGGACACCAAACCCTCTTGGTGAGATTTCTATTTGCAATCCTTTTAGCTTTTACTTAACCCAGCTACAATTAATTGTTTTTAGTTATTTCTGATTTGCCAATTTTAGTTATTTGTTAGTATTATAGATTTATAGGTTGTTAATTCTCCAATCATTGCTTTTCTTAATTCTCATTTTGTTTTGGGGTTGTCAATTGTTGTTCTTGAACACTTTTCTTGTTTGTTTGATGAAATTGAGGAACTATACTTGTATGTTTTAGCATTTACATATAATTATATAATGCGCTTGATTGTACCAAGAGATGTCATTTATGCCATGTAAGAGGTGGTCTCTTTCTCACAAATTGTTGAACAATTACTTGTAAGAAACTGTGATTATACAGCCCTCTTGTACAGTTTGGGAATTGTGAGAGGGGAAACCGAAAGCCCGTGCCTGTTCGGGATTCCAGGTGTAGCGCAGAGTTTGTTCATTGTATGTAGTGTCAAATTGAGCTAGGATATGTGAAAGCTGGTAAAAAAGCTTTAGATGTGTATCTTATAGCTTGGTTAGGTGGTTAATGGTTTTTTGGGAAGATAAAGTGGTGTGTACCTTGTAGCTCGGTTAGGTGGTAATTGTTGGGAGAATGAAGTGGTGTGTTCGTGTGTATCTTGTATCCGGTTAGGTTGTTAATTGTTTTTTGGGCGAATGAAATGGTGTGTTTGTGTATCTTGTAGCTCGGTTCGGTGGTTAATTGTTTTTTTGGAGAATAAGTGTTGTGTTTATGTATCTTATAGCTCGGCTAGGTGGTTAATTGGTTTTTGGAAGGATAAAGGGGTGTGTTTCTTGTAGCTTGGTTAGGTGGTTATTTTTTTTTTGGAAGAATGAAGTGGTGTGTTCGTGTGTATCTTGTAGCCGGTTAGGTGGTTAATTGTTTTTTTGGGAGAATGAGGCGGTGTTTGTGTGTATCTTGTAGCCCGGTTAGGTGGTTAATTGTTTTTTTGGGAGAATGAAGTGGTGTGTTTGTGTGTATCTTGTAGCCCGGTTAGGTGGTTAATTGCTTTTTGGGAGAATGCAGTGGTGTGTTCGTGTATCTTGTAGCTCGGTTAGGTGGTTAATTGTTTTTGGTTAATTGTATCTTGTAACTCTGTTAGCTCGGTTAGGTGGTTGACGGGTAGTTTCTGATTTGTAGCTTACACCACCTTTTGGTCCTTTTCAAAGCAGATATTCCATGTGCATAGTGTTATTTGTGGATGGTACTGGTTTTGGATTGACAGTTTTCCTTATGTTCCTTTTGGTTTTAAAGGCATTATGCTAAATTGGAGAAAGGGATTACAATACACTAAACTAAATGTATTAACCAATACTCCTCCTTTAATCCTTTTAACTGTTTTAAGTAGCAAGTGTCCCAATCGCTTCACAATCAGAGGCCAAACTCAAACGATCTCGACTCTTGAGACCCTTGATGGAGGGACAAGGACATGGTTATGGTAGTACTCCGTATGATTGTAAATTGCTACCTTGGATCCTGCTTCATGGCTGCTTCATGAGAAAATAGTTTGCTAGGAATTTGGGATTCATAACTTCCATTCTTGTCTAGTTTAAATCTGCAGGATTCAGAATTCCTTGATGCTTTTATGTTACCAATAACCTTCTTCAATGGATTTCCTGTTACCATTGTCAATCTCTTGATATGTTATGCCAGTCCAGACAAGTAAGATATACCTACATCACTATATTATCATTTGTCACATATTACAAGAGATAAACTATTATAATCTGTAATTAGGAAAGGAGGATTTTTTTTACAGCAAATGATCGAGGGGTTAATGTTTTTTATTCTTAAGGGTTCATCCCCGTTCATCCATCCCGAATTCCCGCAAGGGAGGAGTGGTTTGTTTATGTATTTTGAAGTTACGAGTGATTTGAAAAGGACATAAGAAAACATCTATTCTAAACATGAGTATACAGAGTGGTGATTTTCTTAAAGCTGCAGATAGCATACTTAACATACAACACAATATTTCGTGTTTGAACAAACAAATAATGTGTTCATTTTGTAAATTGAGATTGACCACTACTTTTTGTGTTATGATTTTTTTTCCAAAGTGAACATTTAATTTGATTGCTTCATTATCTTCATTTCCATGTTAGGTGTCAACCATGGACAATAGCCCTGACTGGAGTATCAGTGATTACATGCAGCTGGCTGGTTTTGCACTCCATTGTTGTTACTGTTTTGGCTTCCACTGTAATCTTTGCATGGTGGTACATCTTCCTATATTCATATCCTAAGGTTTGTGCTTCTTCTTCTTATATTACAACTTGTATATTACATGTGGTCTATATGGAGAGTTGTCTCAGTGTTTCTTTTGGTTCCGTGAAATCAGAAAAATGTTCAACCATAGAGTTCGAATATCCCCTTTTCAGTCTCTGCTGATGTATGCTGTCCTTGAGTTATTCTAGAATTTTATTACATGGGTGAAGCATATTTCACTGGGTTTGAAGGATATATAAACATATTTGCTTGGTTGGTCTTCTCTGCTTACTCTTCCCCGCTTACTCTTCCCCTTCCTGTCTGGCTTGATTGCTCGACTGGCTTTTCCAACTTGGTGCTTCTTGTACTCGAGAAGCTCTAAATATATAACAATGGCATTCTCAATTTGCAACACAACCCCAATATACCCAGAAATGCCCCCTATGTGTAAAAAATGGTTATGGGGCGGGTCGGGCCCACATGTTGCGGTCTAAATGGGCCGGGGCCGCACCAAACCCACGTTGCATCGGGGCGGGGCGGGTCAAAAAGTTGAAAACAAGGCCCGGGCCCACGGGCTGCCGTGCCAGCCCATCATGCCTAAGCCAATTTTACTAAATTTAGTGTGCGTTGTCGTGCCGTGTCTTGTCGTGTTTCTTCCCAAAAAAATTGGAGCACAGGCCCCGCCCACAACTTCGTGCGCATGTTAGGCCAGGCTTTTTCATGTCGGGTCGGGCCTCGGGGTCTGCCCGACCCACATCCATCTTTACCTATGTGTATCAGAATAATACCCCTTTAAGTTTCCCTGATTCACAAAATACCCCTGCAGTATGCTTTTTTTATGAATTAGGCAATTCTTTCTTGTACACCTCTTAAATGAGGTTAACCGTTAACCCATTGTAATTAGACTTGAAAAACATGCAACTTTAGTTTTGATTAGCTTTGAAGAGGAATGGTTTGAAGAGGATTACACAATGAAATTGTTATTACCACTTTTTTTCAGTCATATTCAGAAATGATTGCTGAGCGAAGAAAAAAAGTGAAAAATGGCTCAGAGGACACTTACGGATGGACAAAGAACCAGTGATTTACAATAAGCAACACCACACTAGAAGGGTCCTTTCTTTCTCCCTGTTTCGTATCAAAAGCCAGGGTAGAGTAATTGATCATAATCTGCATGGGAATTAATCTGAACCCTTCACAAATGGCTATTGACAGTTTGACACAAGACAAGGCAGAATGTTGGAACTGTGTTGTACTTTGCAAATTTGTTTTGAGAGATTCAATTTGTATGTGAATAGTTATCATAATCACGAATCATCCAGTTATCACACTGTATCGTGATTCATCAGTATTGTACAGTTGTAGGCCTTGTTCTCTTCACCTGATCTGGTCTGATTTATCTAATTTATGGTGTGGTCTGATTGTTTCCTATGGGTGCTTTTTGTTTTTTCTGGTTTGTCTACGGAGTAATAAGCAATAAGAATCGAAAAGAACAGAGCCATACTTGTAAATTCCAATTTAACATCAAATGATTTCACTCCAAGAAGTTTTCTTGCGGCATCCTTGCAATTCACCATTGACATAAAGATTTTGTTTGTGATGTTGAACCAGCACAATTGGTTATTGGTCATACAACAATACATTCTCTGCACCTAACTGTAAATTTAGAAAATTAAACCACA AAACGTGATCAAGTACTCGTAGTAGCTCAGTAGGGAATGTATTCCTGGGTTTGAATATTTGGGATTTCCGTGACAGGTTTGAAAGATAATCTTCACTACAGCCTAAAAATGGCAGCTCTTCCACTTATTTCCCTCTCTCATCCCTTGCAAACCCATCTTCTTCACTTGCCCTCAACAAAATCCCAGCTCCATAGTCCAATATCATACCCTAAACTCTCATCCGGTGTTCTCCAATCAGTTAAATTTCGCAATAATTCTGCAAAATTGAGAAGCAAGTCCAATGACCCAGTTGAGGCTGACCCTTTGTTCAAAGATCAAGACGGCGTCGTCAGTGATATGGAAGGTTATCTCAATTCTCTCTCCCTCGAGTATGATTCTGTTTGGGACACCAAACCCTCTTGGTGTCAACCATGGACAATAGCCCTGACTGGAGTATCAGTGATTACATGCAGCTGGCTGGTTTTGCACTCCATTGTTGTTACTGTTTTGGCTTCCACTGTAATCTTTGCATGGTGGTACATCTTCCTATATTCATATCCTAAGTCATATTCAGAAATGATTGCTGAGCGAAGAAAAAAAGTGAAAAATGGCTCAGAGGACACTTACGGATGGACAAAGAACCAGTGATTTACAATAAGCAACACCACACTAGAAGGGTCCTTTCTTTCTCCCTGTTTCGTATCAAAAGCCAGGGTAGAGTAATTGATCATAATCTGCATGGGAATTAATCTGAACCCTTCACAAATGGCTATTGACAGTTTGACACAAGACAAGGCAGAATGTTGGAACTGTGTTGTACTTTGCAAATTTGTTTTGAGAGATTCAATTTGTATGTGAATAGTTATCATAATCACGAATCATCCAGTTATCACACTGTATCGTGATTCATCAGTATTGTACAGTTGTAGGCCTTGTTCTCTTCACCTGATCTGGTCTGATTTATCTAATTTATGGTGTGGTCTGATTGTTTCCTATGGGTGCTTTTTGTTTTTTCTGGTTTGTCTACGGAGTAATAAGCAATAAGAATCGAAAAGAACAGAGCCATACTTGTAAATTCCAATTTAACATCAAATGATTTCACTCCAAGAAGTTTTCTTGCGGCATCCTTGCAATTCACCATTGACATAAAGATTTTGTTTGTGATGTTGAACCAGCACAATTGGTTATTGGTCATACAACAATACATTCTCTGCACCTAACTGTAAATTTAGAAAATTAAACCACA ATGGCAGCTCTTCCACTTATTTCCCTCTCTCATCCCTTGCAAACCCATCTTCTTCACTTGCCCTCAACAAAATCCCAGCTCCATAGTCCAATATCATACCCTAAACTCTCATCCGGTGTTCTCCAATCAGTTAAATTTCGCAATAATTCTGCAAAATTGAGAAGCAAGTCCAATGACCCAGTTGAGGCTGACCCTTTGTTCAAAGATCAAGACGGCGTCGTCAGTGATATGGAAGGTTATCTCAATTCTCTCTCCCTCGAGTATGATTCTGTTTGGGACACCAAACCCTCTTGGTGTCAACCATGGACAATAGCCCTGACTGGAGTATCAGTGATTACATGCAGCTGGCTGGTTTTGCACTCCATTGTTGTTACTGTTTTGGCTTCCACTGTAATCTTTGCATGGTGGTACATCTTCCTATATTCATATCCTAAGTCATATTCAGAAATGATTGCTGAGCGAAGAAAAAAAGTGAAAAATGGCTCAGAGGACACTTACGGATGGACAAAGAACCAGTGA MAALPLISLSHPLQTHLLHLPSTKSQLHSPISYPKLSSGVLQSVKFRNNSAKLRSKSNDPVEADPLFKDQDGVVSDMEGYLNSLSLEYDSVWDTKPSWCQPWTIALTGVSVITCSWLVLHSIVVTVLASTVIFAWWYIFLYSYPKSYSEMIAERRKKVKNGSEDTYGWTKNQ Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo02232.1 vs. NCBI nr
Match: gi|902232346|gb|KNA22573.1| (hypothetical protein SOVF_032470 [Spinacia oleracea]) HSP 1 Score: 342.8 bits (878), Expect = 3.400e-91 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1
BLAST of Spo02232.1 vs. NCBI nr
Match: gi|731336053|ref|XP_010679048.1| (PREDICTED: uncharacterized protein LOC104894499 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 253.1 bits (645), Expect = 3.600e-64 Identity = 126/172 (73.26%), Postives = 146/172 (84.88%), Query Frame = 1
BLAST of Spo02232.1 vs. NCBI nr
Match: gi|255559410|ref|XP_002520725.1| (PREDICTED: uncharacterized protein LOC8259591 [Ricinus communis]) HSP 1 Score: 189.1 bits (479), Expect = 6.400e-45 Identity = 97/165 (58.79%), Postives = 121/165 (73.33%), Query Frame = 1
BLAST of Spo02232.1 vs. NCBI nr
Match: gi|657988612|ref|XP_008386485.1| (PREDICTED: uncharacterized protein LOC103448990 [Malus domestica]) HSP 1 Score: 182.6 bits (462), Expect = 5.900e-43 Identity = 98/169 (57.99%), Postives = 123/169 (72.78%), Query Frame = 1
BLAST of Spo02232.1 vs. NCBI nr
Match: gi|950949739|ref|XP_014495228.1| (PREDICTED: uncharacterized protein LOC106757144 [Vigna radiata var. radiata]) HSP 1 Score: 181.4 bits (459), Expect = 1.300e-42 Identity = 91/148 (61.49%), Postives = 111/148 (75.00%), Query Frame = 1
BLAST of Spo02232.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSY1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_032470 PE=4 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 2.400e-91 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1
BLAST of Spo02232.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F372_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g119320 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 2.500e-64 Identity = 126/172 (73.26%), Postives = 146/172 (84.88%), Query Frame = 1
BLAST of Spo02232.1 vs. UniProtKB/TrEMBL
Match: B9S406_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0557330 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 4.400e-45 Identity = 97/165 (58.79%), Postives = 121/165 (73.33%), Query Frame = 1
BLAST of Spo02232.1 vs. UniProtKB/TrEMBL
Match: A0A151TUD8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_009917 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 9.200e-43 Identity = 95/154 (61.69%), Postives = 112/154 (72.73%), Query Frame = 1
BLAST of Spo02232.1 vs. UniProtKB/TrEMBL
Match: B9H895_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23230g PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 3.500e-42 Identity = 89/151 (58.94%), Postives = 111/151 (73.51%), Query Frame = 1
BLAST of Spo02232.1 vs. TAIR (Arabidopsis)
Match: AT4G02725.1 (unknown protein) HSP 1 Score: 167.5 bits (423), Expect = 7.000e-42 Identity = 86/146 (58.90%), Postives = 105/146 (71.92%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02232.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02232.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02232.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo02232.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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