Spo02191 (gene) | SpinachBase

Overview


Name	Spo02191
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	(BnaA09g01020D protein) (BnaC01g30430D protein)
Location	chr5 : 3697445 .. 3698068 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACCCTTGTAGTTGTAGCACAGCACAGGAACCAATACTACAGTAGTATATCAAAGGGAAGGTGTGGTTCATCACCTACTGGAGGGTTTAGGGACATCAATTGTAGGGCTTTTGAATCTGGGATTGGCTTACTTCCTAGTCCTTTTAATGGCTATGGTTCTCCGGTTATGAACCGAGGTTTTATGTCCCCAAACATGCAAACCCCATCTGCTAAAAGTGGTGGGAAATCGATGAGTGAGGATACCAAACCTGGAAAAAGATCAGCGAAAAGTAGCCCAATCCCTATTAACATGAAGGGGGATGGTAGGAATGGGATATTGTCTAGGGAAAGTATGTCATTCTCAGAGCTGTGGGCGGGGCCCGCTTATTCGAACTCACCACCGCCGAGTTCTCTGCCTATGCCCAAATTCTCCATGAAACCAAAGAGGACTGTGTCACTTGAGTTGCCTCACTTGCCTGCATTTGAGTCTGATTTGAACTTGCCACCATTGCCAAAGTCAGCCCCTGCTTCCCCAACTAGAGAATCCACCCATTCACCTTTCAGCTTCCTTCGTGAAGAAGATGACTCTGCTACTAAGACACTTCGCCGGATCCTCAATCTCGATATTGCTGATGATTGA

mRNA sequence

ATGGAAACCCTTGTAGTTGTAGCACAGCACAGGAACCAATACTACAGTAGTATATCAAAGGGAAGGTGTGGTTCATCACCTACTGGAGGGTTTAGGGACATCAATTGTAGGGCTTTTGAATCTGGGATTGGCTTACTTCCTAGTCCTTTTAATGGCTATGGTTCTCCGGTTATGAACCGAGGTTTTATGTCCCCAAACATGCAAACCCCATCTGCTAAAAGTGGTGGGAAATCGATGAGTGAGGATACCAAACCTGGAAAAAGATCAGCGAAAAGTAGCCCAATCCCTATTAACATGAAGGGGGATGGTAGGAATGGGATATTGTCTAGGGAAAGTATGTCATTCTCAGAGCTGTGGGCGGGGCCCGCTTATTCGAACTCACCACCGCCGAGTTCTCTGCCTATGCCCAAATTCTCCATGAAACCAAAGAGGACTGTGTCACTTGAGTTGCCTCACTTGCCTGCATTTGAGTCTGATTTGAACTTGCCACCATTGCCAAAGTCAGCCCCTGCTTCCCCAACTAGAGAATCCACCCATTCACCTTTCAGCTTCCTTCGTGAAGAAGATGACTCTGCTACTAAGACACTTCGCCGGATCCTCAATCTCGATATTGCTGATGATTGA

Coding sequence (CDS)

ATGGAAACCCTTGTAGTTGTAGCACAGCACAGGAACCAATACTACAGTAGTATATCAAAGGGAAGGTGTGGTTCATCACCTACTGGAGGGTTTAGGGACATCAATTGTAGGGCTTTTGAATCTGGGATTGGCTTACTTCCTAGTCCTTTTAATGGCTATGGTTCTCCGGTTATGAACCGAGGTTTTATGTCCCCAAACATGCAAACCCCATCTGCTAAAAGTGGTGGGAAATCGATGAGTGAGGATACCAAACCTGGAAAAAGATCAGCGAAAAGTAGCCCAATCCCTATTAACATGAAGGGGGATGGTAGGAATGGGATATTGTCTAGGGAAAGTATGTCATTCTCAGAGCTGTGGGCGGGGCCCGCTTATTCGAACTCACCACCGCCGAGTTCTCTGCCTATGCCCAAATTCTCCATGAAACCAAAGAGGACTGTGTCACTTGAGTTGCCTCACTTGCCTGCATTTGAGTCTGATTTGAACTTGCCACCATTGCCAAAGTCAGCCCCTGCTTCCCCAACTAGAGAATCCACCCATTCACCTTTCAGCTTCCTTCGTGAAGAAGATGACTCTGCTACTAAGACACTTCGCCGGATCCTCAATCTCGATATTGCTGATGATTGA

Protein sequence

METLVVVAQHRNQYYSSISKGRCGSSPTGGFRDINCRAFESGIGLLPSPFNGYGSPVMNRGFMSPNMQTPSAKSGGKSMSEDTKPGKRSAKSSPIPINMKGDGRNGILSRESMSFSELWAGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLPKSAPASPTRESTHSPFSFLREEDDSATKTLRRILNLDIADD

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo02191.1	Spo02191.1	mRNA

Homology

[Close]

BLAST of Spo02191.1 vs. NCBI nr
Match: gi|902235091|gb|KNA23755.1| (hypothetical protein SOVF_022190 [Spinacia oleracea])

HSP 1 Score: 406.0 bits (1042), Expect = 4.000e-110
Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 1


		  
Query: 1   METLVVVAQHRNQYYSSISKGRCGSSPTGGFRDINCRAFESGIGLLPSPFNGYGSPVMNR 60
           METLVVVAQHRNQYYSSISKGRCGSSPTGGFRDINCRAFESGIGLLPSPFNGYGSPVMNR
Sbjct: 1   METLVVVAQHRNQYYSSISKGRCGSSPTGGFRDINCRAFESGIGLLPSPFNGYGSPVMNR 60

Query: 61  GFMSPNMQTPSAKSGGKSMSEDTKPGKRSAKSSPIPINMKGDG-RNGILSRESMSFSELW 120
           GFMSPNMQTPSAKSGGKSMSEDTKPGKRSAKSSPIPINMKGDG RNGILSRESMSFSELW
Sbjct: 61  GFMSPNMQTPSAKSGGKSMSEDTKPGKRSAKSSPIPINMKGDGGRNGILSRESMSFSELW 120

Query: 121 AGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLPKSAPASPTRESTH 180
           AGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLPKSAPASPTRESTH
Sbjct: 121 AGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLPKSAPASPTRESTH 180

Query: 181 SPFSFLREEDDSATKTLRRILNLDIADD 208
           SPFSFLREEDDSATKTLRRILNLDIADD
Sbjct: 181 SPFSFLREEDDSATKTLRRILNLDIADD 208

[Close]

BLAST of Spo02191.1 vs. NCBI nr
Match: gi|731336083|ref|XP_010679066.1| (PREDICTED: uncharacterized protein LOC104894511 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 308.1 bits (788), Expect = 1.100e-80
Identity = 164/211 (77.73%), Postives = 178/211 (84.36%), Query Frame = 1


		  
Query: 1   METLVVVAQHRNQYYSSISKG----RCGSSPTGGFRDINCRAFESGIGLLPSPFNGYGSP 60
           METLVVVA HRNQYYS   KG    R GSSPTGGFRDINCR FESG+GLLPSP   YG+P
Sbjct: 1   METLVVVAHHRNQYYSGRGKGNSPMRFGSSPTGGFRDINCRTFESGMGLLPSPCKSYGTP 60

Query: 61  VMNRGFMSPNMQTPSAKSGGKSMSEDTKPGKRSAKSSPIPINMKGDGRNGILSRESMSFS 120
           VMNRGF+SP + TP AKSGGK+ SED K  K + +SSPIPIN+KGDG+    +RESMSFS
Sbjct: 61  VMNRGFVSPKVLTPCAKSGGKAKSEDVKILKNTVRSSPIPINLKGDGKKETSARESMSFS 120

Query: 121 ELWAGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLPKSAPASPTRE 180
           ELWAGPAYSNSPPPSSLPMPKFS+KPKRTVSLE   LPA ESDLNL P+PKSAPASPTRE
Sbjct: 121 ELWAGPAYSNSPPPSSLPMPKFSVKPKRTVSLE---LPALESDLNLQPMPKSAPASPTRE 180

Query: 181 STHSPFSFLREEDDSATKTLRRILNLDIADD 208
           ST SPFSFLR +DDSATKTLRRILNLD+ADD
Sbjct: 181 STRSPFSFLR-DDDSATKTLRRILNLDVADD 207

[Close]

BLAST of Spo02191.1 vs. NCBI nr
Match: gi|460403396|ref|XP_004247177.1| (PREDICTED: uncharacterized protein LOC101259575 [Solanum lycopersicum])

HSP 1 Score: 197.2 bits (500), Expect = 2.800e-47
Identity = 122/220 (55.45%), Postives = 150/220 (68.18%), Query Frame = 1


		  
Query: 1   METLVVVAQHRNQYY------SSISKGRCGSSPTGGFRDINCRAFESGIGLLPSPFNGYG 60
           METLVVV+QH+N YY      + I  G  GS P+ GF++INCR FES  G+LP+P   Y 
Sbjct: 1   METLVVVSQHKNHYYDRTRGQAPIRFGSFGSPPSVGFKEINCRNFESSAGILPTPLKAYS 60

Query: 61  SPVMNRGFMSP-NMQTPSAKSG--GKSMSEDTKPGKRSAKSSP--IPINMKGDG---RNG 120
           +PV  +G+ S    +TPS  S   GKS SE  K  K+S  SS   IPI++KG G   + G
Sbjct: 61  TPVTKKGYSSSFRSKTPSPPSSIQGKSHSEGQKKSKKSVHSSAVSIPIDIKGGGDSRKEG 120

Query: 121 ILSRESMSFSELWAGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLP 180
            L+ E  ++SELWAGPAYSNSPPPSSLP+PKFS+KPKRTVSL+LP    F   ++LPP  
Sbjct: 121 SLNDE-FAYSELWAGPAYSNSPPPSSLPIPKFSVKPKRTVSLDLPTTSPF--GIDLPPFA 180

Query: 181 KSAPASPTRESTHSPFSFLREEDDSATKTLRRILNLDIAD 207
           KSAPASPTRE + SP   L +  DSAT+TLRRILNL+I D
Sbjct: 181 KSAPASPTRERSPSP-GVLSDSTDSATQTLRRILNLEIMD 216

[Close]

BLAST of Spo02191.1 vs. NCBI nr
Match: gi|970052351|ref|XP_015087782.1| (PREDICTED: uncharacterized protein LOC107031089 [Solanum pennellii])

HSP 1 Score: 196.4 bits (498), Expect = 4.800e-47
Identity = 122/220 (55.45%), Postives = 150/220 (68.18%), Query Frame = 1


		  
Query: 1   METLVVVAQHRNQYY------SSISKGRCGSSPTGGFRDINCRAFESGIGLLPSPFNGYG 60
           METLVVV+QH+N YY      + I  G  GS P+ GF++INCR FES  G+LP+P   Y 
Sbjct: 1   METLVVVSQHKNHYYDRTRGQAPIRCGSFGSPPSVGFKEINCRNFESSAGILPTPLKAYS 60

Query: 61  SPVMNRGFMSP-NMQTPSAKSG--GKSMSEDTKPGKRSAKSSP--IPINMKGDG---RNG 120
           +PV  +G+ S    +TPS  S   GKS SE  K  K+S  SS   IPI++KG G   + G
Sbjct: 61  TPVTKKGYSSSFRSKTPSPPSSIQGKSHSEGQKKSKKSVHSSAVSIPIDIKGCGDSRKEG 120

Query: 121 ILSRESMSFSELWAGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLP 180
            L+ E  ++SELWAGPAYSNSPPPSSLP+PKFS+KPKRTVSL+LP    F   ++LPP  
Sbjct: 121 SLNDE-FAYSELWAGPAYSNSPPPSSLPIPKFSVKPKRTVSLDLPTTSPF--GIDLPPFA 180

Query: 181 KSAPASPTRESTHSPFSFLREEDDSATKTLRRILNLDIAD 207
           KSAPASPTRE + SP   L +  DSAT+TLRRILNL+I D
Sbjct: 181 KSAPASPTRERSPSP-GVLSDSTDSATQTLRRILNLEIMD 216

[Close]

BLAST of Spo02191.1 vs. NCBI nr
Match: gi|703061961|ref|XP_010086616.1| (hypothetical protein L484_002441 [Morus notabilis])

HSP 1 Score: 191.0 bits (484), Expect = 2.000e-45
Identity = 120/215 (55.81%), Postives = 145/215 (67.44%), Query Frame = 1


		  
Query: 1   METLVVVAQHRNQYYSSISK---GRCGSSPTGGFRDINCRAFESGIGLLPSPFNGYGSPV 60
           METL+VVA+HRNQY S +     GR  SSP+  F+ INCR+F+S  G+LPSP     +PV
Sbjct: 1   METLMVVAEHRNQYCSRVKSQGPGRFWSSPSRDFQGINCRSFQSAAGILPSPLKADTTPV 60

Query: 61  MNRGFMSPNMQTPSAKSGGKSMSEDTKPGKRSAKSSPIPINMKGDGRNGILSRE----SM 120
             R   SP  +TPS   G  S SE     + +AKS+PI I+ KG  R    S E     +
Sbjct: 61  SKRACSSP--KTPSPCVG--SASESKTLSRTTAKSAPIAIDFKGPNRRKYFSDEVCDEGL 120

Query: 121 SFSELWAGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLPKSAPASP 180
           SFSELWAGPAYSNSPPPSSLP+PKFS++PKRTVSLELP L     D+ + P+ KSAPASP
Sbjct: 121 SFSELWAGPAYSNSPPPSSLPIPKFSVRPKRTVSLELPGL---GPDVEMHPIAKSAPASP 180

Query: 181 TRESTHSPFS-FLREEDDSATKTLRRILNLDIADD 208
           TR   HSPF+  + +  DSAT+TLRRILNLDI DD
Sbjct: 181 TR--GHSPFTKDIFQSADSATETLRRILNLDICDD 206

[Close]

BLAST of Spo02191.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RW39_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_022190 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 2.800e-110
Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 1


		  
Query: 1   METLVVVAQHRNQYYSSISKGRCGSSPTGGFRDINCRAFESGIGLLPSPFNGYGSPVMNR 60
           METLVVVAQHRNQYYSSISKGRCGSSPTGGFRDINCRAFESGIGLLPSPFNGYGSPVMNR
Sbjct: 1   METLVVVAQHRNQYYSSISKGRCGSSPTGGFRDINCRAFESGIGLLPSPFNGYGSPVMNR 60

Query: 61  GFMSPNMQTPSAKSGGKSMSEDTKPGKRSAKSSPIPINMKGDG-RNGILSRESMSFSELW 120
           GFMSPNMQTPSAKSGGKSMSEDTKPGKRSAKSSPIPINMKGDG RNGILSRESMSFSELW
Sbjct: 61  GFMSPNMQTPSAKSGGKSMSEDTKPGKRSAKSSPIPINMKGDGGRNGILSRESMSFSELW 120

Query: 121 AGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLPKSAPASPTRESTH 180
           AGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLPKSAPASPTRESTH
Sbjct: 121 AGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLPKSAPASPTRESTH 180

Query: 181 SPFSFLREEDDSATKTLRRILNLDIADD 208
           SPFSFLREEDDSATKTLRRILNLDIADD
Sbjct: 181 SPFSFLREEDDSATKTLRRILNLDIADD 208

[Close]

BLAST of Spo02191.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CDV6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g119440 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 7.900e-81
Identity = 164/211 (77.73%), Postives = 178/211 (84.36%), Query Frame = 1


		  
Query: 1   METLVVVAQHRNQYYSSISKG----RCGSSPTGGFRDINCRAFESGIGLLPSPFNGYGSP 60
           METLVVVA HRNQYYS   KG    R GSSPTGGFRDINCR FESG+GLLPSP   YG+P
Sbjct: 1   METLVVVAHHRNQYYSGRGKGNSPMRFGSSPTGGFRDINCRTFESGMGLLPSPCKSYGTP 60

Query: 61  VMNRGFMSPNMQTPSAKSGGKSMSEDTKPGKRSAKSSPIPINMKGDGRNGILSRESMSFS 120
           VMNRGF+SP + TP AKSGGK+ SED K  K + +SSPIPIN+KGDG+    +RESMSFS
Sbjct: 61  VMNRGFVSPKVLTPCAKSGGKAKSEDVKILKNTVRSSPIPINLKGDGKKETSARESMSFS 120

Query: 121 ELWAGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLPKSAPASPTRE 180
           ELWAGPAYSNSPPPSSLPMPKFS+KPKRTVSLE   LPA ESDLNL P+PKSAPASPTRE
Sbjct: 121 ELWAGPAYSNSPPPSSLPMPKFSVKPKRTVSLE---LPALESDLNLQPMPKSAPASPTRE 180

Query: 181 STHSPFSFLREEDDSATKTLRRILNLDIADD 208
           ST SPFSFLR +DDSATKTLRRILNLD+ADD
Sbjct: 181 STRSPFSFLR-DDDSATKTLRRILNLDVADD 207

[Close]

BLAST of Spo02191.1 vs. UniProtKB/TrEMBL
Match: K4CUG5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.000e-47
Identity = 122/220 (55.45%), Postives = 150/220 (68.18%), Query Frame = 1


		  
Query: 1   METLVVVAQHRNQYY------SSISKGRCGSSPTGGFRDINCRAFESGIGLLPSPFNGYG 60
           METLVVV+QH+N YY      + I  G  GS P+ GF++INCR FES  G+LP+P   Y 
Sbjct: 1   METLVVVSQHKNHYYDRTRGQAPIRFGSFGSPPSVGFKEINCRNFESSAGILPTPLKAYS 60

Query: 61  SPVMNRGFMSP-NMQTPSAKSG--GKSMSEDTKPGKRSAKSSP--IPINMKGDG---RNG 120
           +PV  +G+ S    +TPS  S   GKS SE  K  K+S  SS   IPI++KG G   + G
Sbjct: 61  TPVTKKGYSSSFRSKTPSPPSSIQGKSHSEGQKKSKKSVHSSAVSIPIDIKGGGDSRKEG 120

Query: 121 ILSRESMSFSELWAGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLP 180
            L+ E  ++SELWAGPAYSNSPPPSSLP+PKFS+KPKRTVSL+LP    F   ++LPP  
Sbjct: 121 SLNDE-FAYSELWAGPAYSNSPPPSSLPIPKFSVKPKRTVSLDLPTTSPF--GIDLPPFA 180

Query: 181 KSAPASPTRESTHSPFSFLREEDDSATKTLRRILNLDIAD 207
           KSAPASPTRE + SP   L +  DSAT+TLRRILNL+I D
Sbjct: 181 KSAPASPTRERSPSP-GVLSDSTDSATQTLRRILNLEIMD 216

[Close]

BLAST of Spo02191.1 vs. UniProtKB/TrEMBL
Match: W9QBH2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002441 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.400e-45
Identity = 120/215 (55.81%), Postives = 145/215 (67.44%), Query Frame = 1


		  
Query: 1   METLVVVAQHRNQYYSSISK---GRCGSSPTGGFRDINCRAFESGIGLLPSPFNGYGSPV 60
           METL+VVA+HRNQY S +     GR  SSP+  F+ INCR+F+S  G+LPSP     +PV
Sbjct: 1   METLMVVAEHRNQYCSRVKSQGPGRFWSSPSRDFQGINCRSFQSAAGILPSPLKADTTPV 60

Query: 61  MNRGFMSPNMQTPSAKSGGKSMSEDTKPGKRSAKSSPIPINMKGDGRNGILSRE----SM 120
             R   SP  +TPS   G  S SE     + +AKS+PI I+ KG  R    S E     +
Sbjct: 61  SKRACSSP--KTPSPCVG--SASESKTLSRTTAKSAPIAIDFKGPNRRKYFSDEVCDEGL 120

Query: 121 SFSELWAGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLPKSAPASP 180
           SFSELWAGPAYSNSPPPSSLP+PKFS++PKRTVSLELP L     D+ + P+ KSAPASP
Sbjct: 121 SFSELWAGPAYSNSPPPSSLPIPKFSVRPKRTVSLELPGL---GPDVEMHPIAKSAPASP 180

Query: 181 TRESTHSPFS-FLREEDDSATKTLRRILNLDIADD 208
           TR   HSPF+  + +  DSAT+TLRRILNLDI DD
Sbjct: 181 TR--GHSPFTKDIFQSADSATETLRRILNLDICDD 206

[Close]

BLAST of Spo02191.1 vs. UniProtKB/TrEMBL
Match: A0A0V0ISP9_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.800e-45
Identity = 119/219 (54.34%), Postives = 147/219 (67.12%), Query Frame = 1


		  
Query: 1   METLVVVAQHRNQYY------SSISKGRCGSSPTGGFRDINCRAFESGIGLLPSPFNGYG 60
           METLVVV+QH+N YY      + I  G  GS P+ GF++INCR FESG+G+LP+P     
Sbjct: 1   METLVVVSQHKNHYYDRTRGQAPIRFGSFGSPPSVGFKEINCRNFESGVGILPTPLKACS 60

Query: 61  SPVMNRGFMSPNM-QTPSAKSG--GKSMSEDTKPGKRSAKSS----PIPINMKGDGRNGI 120
           +PV  +G+ S    +TPS  S   GKS SE  K  K+SA SS    PI I + GD R  +
Sbjct: 61  TPVTKKGYSSSFCSKTPSPPSSIQGKSHSELQKKSKKSAHSSALSIPIDIKLGGDSRKEL 120

Query: 121 LSRESMSFSELWAGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLPK 180
              +  ++SELWAGPAYSNSPPPSSLP+PKFS+KPKRTVSL+LP    F   ++L P  K
Sbjct: 121 --NDEFAYSELWAGPAYSNSPPPSSLPIPKFSVKPKRTVSLDLPTTSPF--GIDLLPFAK 180

Query: 181 SAPASPTRESTHSPFSFLREEDDSATKTLRRILNLDIAD 207
           SAPASPTRE + SP   L +  DSAT+TLRRILNL+I D
Sbjct: 181 SAPASPTRERSPSP-GVLSDCTDSATQTLRRILNLEIMD 214

[Close]

BLAST of Spo02191.1 vs. TAIR (Arabidopsis)
Match: AT4G02715.1 (unknown protein)

HSP 1 Score: 141.7 bits (356), Expect = 4.900e-34
Identity = 96/212 (45.28%), Postives = 129/212 (60.85%), Query Frame = 1


		  
Query: 1   METLVVVAQHRNQYYSSISKG--RCGSSPTGGFRDINCRAFESGIGLLPSPFNGYGSPVM 60
           METL+V  +HR+QYY   S G  R  S+P+  FR INCR F+SG+GLLP P     +P +
Sbjct: 1   METLIVAVEHRDQYYGKKSLGHDRFRSAPSKTFRQINCRTFQSGVGLLPRPKRTSSTP-L 60

Query: 61  NRGFMSPNMQTPSAKSGGKSMSEDTKPGKRSAKSSPIPI-NMKGD-----GRNGILSRES 120
            +G +S   Q  S +S    +     P   S ++SPIPI N +G          +  R S
Sbjct: 61  TKGALS---QVQSPRSPKSVLPVFHHPSVDSGRTSPIPIANCRGSQIRRCSSEFVDKRRS 120

Query: 121 MSFSELWAGPAYSNSPPPSSLPMPKFSMKPKRTVSLELPHLPAFESDLNLPPLPKSAPAS 180
           +S+SELWAGP YSNSPPP+S+P+PKFS++ KRTVSL     PA +S +++  + KSAP S
Sbjct: 121 LSYSELWAGPTYSNSPPPASVPIPKFSLQQKRTVSLT---FPAPDSAVDIREVAKSAPVS 180

Query: 181 PTRESTHSPFSFLREEDDSATKTLRRILNLDI 205
           PT  S  +PF        SAT TLRR+LNL++
Sbjct: 181 PT-SSGDNPF----RSTVSATMTLRRMLNLEL 200

The following BLAST results are available for this feature:

BLAST of Spo02191.1 vs. NCBI nr
BLAST of Spo02191.1 vs. UniProtKB/TrEMBL
BLAST of Spo02191.1 vs. ExPASy Swiss-Prot
BLAST of Spo02191.1 vs. TAIR (Arabidopsis)

BLAST of Spo02191.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902235091\|gb\|KNA23755.1\|	4.0e-110	99.5	hypothetical protein SOVF_0221...	[more]
gi\|731336083\|ref\|XP_010679066.1\|	1.1e-80	77.7	PREDICTED: uncharacterized pro...	[more]
gi\|460403396\|ref\|XP_004247177.1\|	2.8e-47	55.4	PREDICTED: uncharacterized pro...	[more]
gi\|970052351\|ref\|XP_015087782.1\|	4.8e-47	55.4	PREDICTED: uncharacterized pro...	[more]
gi\|703061961\|ref\|XP_010086616.1\|	2.0e-45	55.8	hypothetical protein L484_0024...	[more]

BLAST of Spo02191.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RW39_SPIOL	2.8e-110	99.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8CDV6_BETVU	7.9e-81	77.7	Uncharacterized protein OS=Bet...	[more]
K4CUG5_SOLLC	2.0e-47	55.4	Uncharacterized protein OS=Sol...	[more]
W9QBH2_9ROSA	1.4e-45	55.8	Uncharacterized protein OS=Mor...	[more]
A0A0V0ISP9_SOLCH	1.8e-45	54.3	Putative ovule protein OS=Sola...	[more]

BLAST of Spo02191.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo02191.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT4G02715.1	4.9e-34	45.2	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35306	FAMILY NOT NAMED	coord: 2..207 score: 6.3
None	No IPR available	PANTHER	PTHR35306:SF1	SUBFAMILY NOT NAMED	coord: 2..207 score: 6.3
None	No IPR available	PFAM	PF15365	PNRC	coord: 118..202 score: 2.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0046983	protein dimerization activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo06624	0.77	Barchart \| Table
Spo01207	0.74	Barchart \| Table
Spo01362	0.71	Barchart \| Table
Spo24631	0.71	Barchart \| Table
Spo19456	0.71	Barchart \| Table
Spo21402	0.70	Barchart \| Table
Spo01222	0.69	Barchart \| Table
Spo12383	0.68	Barchart \| Table
Spo10651	0.67	Barchart \| Table
Spo08782	0.67	Barchart \| Table
Spo21792	0.67	Barchart \| Table
Spo07244	0.67	Barchart \| Table
Spo25035	0.67	Barchart \| Table
Spo28323	0.66	Barchart \| Table