Spo01954 (gene)

Overview
NameSpo01954
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHigh chlorophyll fluorescence 153, putative
LocationSpoScf_01438 : 1033 .. 3843 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGATGCGCACCTTGAGGTATAATCCAATTTACGAGCCATAAGATAGCCAAAGACGAGCATATCACTCTATCCACTCAAAGATGGCAGCTTTGAGTAGTATCACCTCTAATTCTCTCTCTCCTACTCTCTACCCCACACAACAACCACTTCACGTCGCTTTTCCGACTTCTCTCCGCTCATCAGCCGTTCGATTTTCCGGCGAATTAGACCGCCGGCGAATGAGAGGAGTCAGTGTAATCACTCGTGCTGGCCCAACCACTAACCAGTTCATATTCGCTTTTGTATTCCCACTCTCTCTCCTCGCCATTACTGTCGTCACGGCTTTACGAATTGGCGATAGACTTGAGCAGAAGTTTCTCGAAGAGGTATAATTGATTAATTAATTCATTAATACAGTCTTTTTTGCATGATAAGTTGCTGAAATTTTGTTTCCGTGTGGTATTTTATGCGGTGTTGTTTGTTTGATTGGAATTGCGTTTATGGAAATTTATTGGGATTTTGAAAGTTTATGTTTTTATTACAAAATGAAGAAATTGAACATATCCCGAGTGATTTCGGAGGACTTAGAATGATTCCCAATTTGCAAGTTGCAACAACACACTTGGGTTAGCTTACAAGATCATTTTCCCTTTGCAAAATCCTTGTTTTTGTGTGTCTAATTGTGTATAGAGCCACAAGATGAGAAGAGGCAATGATGTAGACGGGATTTTCGGTAGGGTAACGCTCTCGGAGACGTTAGCCAACAAAGCTGGTCAGGTTGTTGTATTGAGTAAAGTATTTGAGTAATGAAAGTCTTATTGTTTAAGATTCTTACTGTGAGGAAAAACTTGTGTTTGAACTGTGGTACAGATTTCAAGAAACATGCCGTTGAACCCTCAATTGAGGGGTGAAAGTTGACATCTTTGATTTCTGTTGCTCAATAATACTATCGGTGTATACTGCAAAGATTGCTTTGGTACAATAGTCATAAAAGAGAATTGATAATCGGAAGAAGAGAGAATCAGAGTGAGGAGTTTTAAAGTTAATCGAGCTTGAATGCGATTTTCATAGAGGCAAGAGTACATAGTTTATCCTTCTACGACTGACAATTTCTAGTTTGTTAATCCGAAATCCAAATAGGTCTCTTGCTATATATCCAAGGTAATTTATTAAAGAAAGTACACCTGAGTGATTAATCTTTCTGAAACTAGAATAAAAAAGCTAGAAAAGGATTCAGTGAGGCTTTGCAAACGAGAGGGTTCTAAGAGTATACACGGCTGGGGCAGAGTGAATTATGAAGTAGTGGCTACTATGATACCTTTTCTATGAATGAAGTTCGGGTAACCTTCATGATATGTCTCTTTAGTGATTAGGTAGAGTTCACAGCAAACTGAGTACTCTCAAGTCTCAGCCTCTCACTGTGTTTAGGGCGGTGTGTTGCGAGATATTTGGATGTAATGATGGGGAGTGACTGGGTTTTTGCTGCGTAAAAAAGATGTGCCACAGGACATTTCTCAACTGAGACCATCTCCCAATTGTTTGCATTGGTTTTTAGTGCTGGATAGACACTGACTGCTGGGTAGTGCTGACTGTGGCTTACTTTGCACAATGATGTTGAATATTGTTCAGTTCTTGCCTGCCACAGACGGAAAAATTGGAAGTTGAGATAGTAATTTGCTTGCATGCCCTCATGCAGCTGCAAGATTGTATCCAGCATTTTCTTTGTGATTTTGTCGTTGCAAGTTCAGAGTCCACGTATTCCCCCTTTATACATTTTACACAGTGGATGTTCCAAACTCCATGCGCTCCTACTGGAGCCTGGAGGTGTCTGCCTGGAATGAACTATGAAGTGTGTTGAAGCAAAAGTATTGGAATTGAGTACATCCACCCTTCCCCCAATTAATGGTAAACCGTATGAATAGGATGATGATTGACGAGGGATAGTTGATGTAATTCTTTCATTTGTTTCATTGATATGTGGTGGTGATCTGCTTCTATGGTTTATTTTGTACATCTGTTTTGTTATTTAGAGTAACAGTCTTTGGATCACATTGGGTTTTTAGTGAGGTACGCATTTGTATTGCTTGCCTTGTTTTTTGTTCCTGATTATGGTGGTGTGACAGCTTGCCATGAATGAAGCGATAAGAGAAGCAGAGGAAGAGAACGATGATGGCACTGAAGTAGTGATCCCAAGAAAAGAAGAACCTGCACTTCCCAGAGCTCGCAATAGGCCAAAGCGTGAAGTTTGAATTCCACGCATTCTATATATGTGAGGTTGCTATCATTTATTTGTAGGGTAGGTCTTGTGTAGGCATCTTCACAATTGTAATGCTCCAATCATTCATGAGATGAACTGAATACACCTCCATTTTGTATAGCTATATTTTGGATAGTGGGATCTATAATGATAAATGCAATAGGCCGGTATCGTAGTAGTGGTGGAATTTGAAAGGGAAGTTAACTTTGTTATGAAAGCAAAGTTGCCAAATGAAGGTTCATTGTCAAAGGATTGAGGGACCATGAGAGTCTGAAGATGCTAGCTGAGCTGAGCGTGTTGAACTGCTGATTACCACTACTTGCTTTCATTGAGAAGTGTAATCTGATATCTGTGTATACTAAGGAGTGTTATAGAAATTCTGTAGATTCTAGCCTTTGTTTCCAAAATTATGGATTGAAGATTTATTGCCCACAAATTTTTATTTAAAGGTGTATTGTATACCGGTAAAAAACTTAACTTAAAATTACTCTGATATGTGTAAAAGTTATTTATTTTTTAGCGAGTATATTTTTCATTTTAATACAAAATTTTCCTTTTAAATTACTAATA

mRNA sequence

ATGCTCGATGCGCACCTTGAGGTATAATCCAATTTACGAGCCATAAGATAGCCAAAGACGAGCATATCACTCTATCCACTCAAAGATGGCAGCTTTGAGTAGTATCACCTCTAATTCTCTCTCTCCTACTCTCTACCCCACACAACAACCACTTCACGTCGCTTTTCCGACTTCTCTCCGCTCATCAGCCGTTCGATTTTCCGGCGAATTAGACCGCCGGCGAATGAGAGGAGTCAGTGTAATCACTCGTGCTGGCCCAACCACTAACCAGTTCATATTCGCTTTTGTATTCCCACTCTCTCTCCTCGCCATTACTGTCGTCACGGCTTTACGAATTGGCGATAGACTTGAGCAGAAGTTTCTCGAAGAGCTTGCCATGAATGAAGCGATAAGAGAAGCAGAGGAAGAGAACGATGATGGCACTGAAGTAGTGATCCCAAGAAAAGAAGAACCTGCACTTCCCAGAGCTCGCAATAGGCCAAAGCGTGAAGTTTGAATTCCACGCATTCTATATATGTGAGGTTGCTATCATTTATTTGTAGGGTAGGTCTTGTGTAGGCATCTTCACAATTGTAATGCTCCAATCATTCATGAGATGAACTGAATACACCTCCATTTTGTATAGCTATATTTTGGATAGTGGGATCTATAATGATAAATGCAATAGGCCGGTATCGTAGTAGTGGTGGAATTTGAAAGGGAAGTTAACTTTGTTATGAAAGCAAAGTTGCCAAATGAAGGTTCATTGTCAAAGGATTGAGGGACCATGAGAGTCTGAAGATGCTAGCTGAGCTGAGCGTGTTGAACTGCTGATTACCACTACTTGCTTTCATTGAGAAGTGTAATCTGATATCTGTGTATACTAAGGAGTGTTATAGAAATTCTGTAGATTCTAGCCTTTGTTTCCAAAATTATGGATTGAAGATTTATTGCCCACAAATTTTTATTTAAAGGTGTATTGTATACCGGTAAAAAACTTAACTTAAAATTACTCTGATATGTGTAAAAGTTATTTATTTTTTAGCGAGTATATTTTTCATTTTAATACAAAATTTTCCTTTTAAATTACTAATA

Coding sequence (CDS)

ATGGCAGCTTTGAGTAGTATCACCTCTAATTCTCTCTCTCCTACTCTCTACCCCACACAACAACCACTTCACGTCGCTTTTCCGACTTCTCTCCGCTCATCAGCCGTTCGATTTTCCGGCGAATTAGACCGCCGGCGAATGAGAGGAGTCAGTGTAATCACTCGTGCTGGCCCAACCACTAACCAGTTCATATTCGCTTTTGTATTCCCACTCTCTCTCCTCGCCATTACTGTCGTCACGGCTTTACGAATTGGCGATAGACTTGAGCAGAAGTTTCTCGAAGAGCTTGCCATGAATGAAGCGATAAGAGAAGCAGAGGAAGAGAACGATGATGGCACTGAAGTAGTGATCCCAAGAAAAGAAGAACCTGCACTTCCCAGAGCTCGCAATAGGCCAAAGCGTGAAGTTTGA

Protein sequence

MAALSSITSNSLSPTLYPTQQPLHVAFPTSLRSSAVRFSGELDRRRMRGVSVITRAGPTTNQFIFAFVFPLSLLAITVVTALRIGDRLEQKFLEELAMNEAIREAEEENDDGTEVVIPRKEEPALPRARNRPKREV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo01954.1Spo01954.1mRNA


Homology
[Close]
BLAST of Spo01954.1 vs. NCBI nr
Match: gi|902200742|gb|KNA13816.1| (hypothetical protein SOVF_113190 [Spinacia oleracea])

HSP 1 Score: 254.2 bits (648), Expect = 1.300e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

		  

Query: 1   MAALSSITSNSLSPTLYPTQQPLHVAFPTSLRSSAVRFSGELDRRRMRGVSVITRAGPTT 60
           MAALSSITSNSLSPTLYPTQQPLHVAFPTSLRSSAVRFSGELDRRRMRGVSVITRAGPTT
Sbjct: 1   MAALSSITSNSLSPTLYPTQQPLHVAFPTSLRSSAVRFSGELDRRRMRGVSVITRAGPTT 60

Query: 61  NQFIFAFVFPLSLLAITVVTALRIGDRLEQKFLEELAMNEAIREAEEENDDGTEVVIPRK 120
           NQFIFAFVFPLSLLAITVVTALRIGDRLEQKFLEELAMNEAIREAEEENDDGTEVVIPRK
Sbjct: 61  NQFIFAFVFPLSLLAITVVTALRIGDRLEQKFLEELAMNEAIREAEEENDDGTEVVIPRK 120

Query: 121 EEPALPRARNRPKREV 137
           EEPALPRARNRPKREV
Sbjct: 121 EEPALPRARNRPKREV 136
[Close]
BLAST of Spo01954.1 vs. NCBI nr
Match: gi|731319649|ref|XP_010670384.1| (PREDICTED: uncharacterized protein LOC104887451 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 203.0 bits (515), Expect = 3.400e-49
Identity = 108/136 (79.41%), Postives = 119/136 (87.50%), Query Frame = 1 

		  

Query: 1   MAALSSITSNSLSPTLYPTQQPLHVAFPTSLRSSAVRFSGELDRRRMRGVSVITRAGPTT 60
           MAALSSI   SLSP +Y +QQ LH+A P  LRSS+VRFSGELDRR+MRG+SV+TRAGP+T
Sbjct: 1   MAALSSILFKSLSPAIYQSQQTLHLALPNCLRSSSVRFSGELDRRKMRGISVVTRAGPST 60

Query: 61  NQFIFAFVFPLSLLAITVVTALRIGDRLEQKFLEELAMNEAIREAEEENDDGTEVVIPRK 120
           +Q IFAFVFP SLLAITV TALRIGD+L+QKFLEELAMNEAIREAEEENDD  E V PRK
Sbjct: 61  SQLIFAFVFPFSLLAITVFTALRIGDKLDQKFLEELAMNEAIREAEEENDDVNETVFPRK 120

Query: 121 EEPALPRARNRPKREV 137
           EEPAL RARNRPKREV
Sbjct: 121 EEPALHRARNRPKREV 136
[Close]
BLAST of Spo01954.1 vs. NCBI nr
Match: gi|225449921|ref|XP_002268521.1| (PREDICTED: uncharacterized protein LOC100256905 [Vitis vinifera])

HSP 1 Score: 134.0 bits (336), Expect = 1.900e-28
Identity = 69/103 (66.99%), Postives = 89/103 (86.41%), Query Frame = 1 

		  

Query: 33  SSAVRFSGELDRRRMRGVSVITRAGPTTNQFIFAFVFPLSLLAITVVTALRIGDRLEQKF 92
           S AVRFSGEL RR+ RG+SV+TRAGP+T+ ++FAFVFPLSLLA+T+ T+LR+ D+LE++F
Sbjct: 33  SPAVRFSGELCRRKTRGLSVVTRAGPSTSSYVFAFVFPLSLLAVTIFTSLRVDDKLEREF 92

Query: 93  LEELAMNEAIREAEEENDDGTEVVIPRKEEPALPRARNRPKRE 136
           LEELA+NEA+REA+EE  D   V IP ++EPA+PR RNRPKRE
Sbjct: 93  LEELAVNEAMREADEEEGD---VAIPVEKEPAVPRTRNRPKRE 132
[Close]
BLAST of Spo01954.1 vs. NCBI nr
Match: gi|596056794|ref|XP_007220962.1| (hypothetical protein PRUPE_ppa026290mg, partial [Prunus persica])

HSP 1 Score: 117.5 bits (293), Expect = 1.900e-23
Identity = 62/104 (59.62%), Postives = 85/104 (81.73%), Query Frame = 1 

		  

Query: 33  SSAVRFSGELDRRRMRGVSVITRAGPTTNQFIFAFVFPLSLLAITVVTALRIGDRLEQKF 92
           S A RFS     R+ RG++V+TRAGPTTNQ++FAFV PLSL+A+TV T++RI D+L+++F
Sbjct: 15  SPATRFSS----RQARGLTVVTRAGPTTNQYVFAFVMPLSLIAVTVFTSMRIADKLDEEF 74

Query: 93  LEELAMNEAIREAEEENDDGTEVVIPRKEEPALPRARNRPKREV 137
           LEE+A+N+AIRE +E++    EV +P +E+PALPR RNRPKREV
Sbjct: 75  LEEIAINQAIRETDEDD----EVDMPIEEKPALPRTRNRPKREV 110
[Close]
BLAST of Spo01954.1 vs. NCBI nr
Match: gi|645251101|ref|XP_008231524.1| (PREDICTED: uncharacterized protein LOC103330698 [Prunus mume])

HSP 1 Score: 116.7 bits (291), Expect = 3.200e-23
Identity = 68/132 (51.52%), Postives = 95/132 (71.97%), Query Frame = 1 

		  

Query: 5   SSITSNSLSPTLYPTQQPLHVAFPTSLRSSAVRFSGELDRRRMRGVSVITRAGPTTNQFI 64
           +S+T +  +P+      P HV       S A RFS     R+ RG++V+TRAGPTTNQ++
Sbjct: 10  ASLTLSPPAPSSRALLNPPHVPI-----SPATRFSC----RQARGLTVVTRAGPTTNQYV 69

Query: 65  FAFVFPLSLLAITVVTALRIGDRLEQKFLEELAMNEAIREAEEENDDGTEVVIPRKEEPA 124
           FAFV PLSL+A+TV T++RI D+L++ FLEE+A+N+AIRE +E++    EV +P +E+PA
Sbjct: 70  FAFVMPLSLIAVTVFTSMRIADKLDEDFLEEIAINQAIRETDEDD----EVDMPIEEKPA 128

Query: 125 LPRARNRPKREV 137
           LPR RNRPKREV
Sbjct: 130 LPRTRNRPKREV 128
[Close]
BLAST of Spo01954.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2S2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113190 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 8.900e-65
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

		  

Query: 1   MAALSSITSNSLSPTLYPTQQPLHVAFPTSLRSSAVRFSGELDRRRMRGVSVITRAGPTT 60
           MAALSSITSNSLSPTLYPTQQPLHVAFPTSLRSSAVRFSGELDRRRMRGVSVITRAGPTT
Sbjct: 1   MAALSSITSNSLSPTLYPTQQPLHVAFPTSLRSSAVRFSGELDRRRMRGVSVITRAGPTT 60

Query: 61  NQFIFAFVFPLSLLAITVVTALRIGDRLEQKFLEELAMNEAIREAEEENDDGTEVVIPRK 120
           NQFIFAFVFPLSLLAITVVTALRIGDRLEQKFLEELAMNEAIREAEEENDDGTEVVIPRK
Sbjct: 61  NQFIFAFVFPLSLLAITVVTALRIGDRLEQKFLEELAMNEAIREAEEENDDGTEVVIPRK 120

Query: 121 EEPALPRARNRPKREV 137
           EEPALPRARNRPKREV
Sbjct: 121 EEPALPRARNRPKREV 136
[Close]
BLAST of Spo01954.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CU96_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g041000 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.300e-49
Identity = 108/136 (79.41%), Postives = 119/136 (87.50%), Query Frame = 1 

		  

Query: 1   MAALSSITSNSLSPTLYPTQQPLHVAFPTSLRSSAVRFSGELDRRRMRGVSVITRAGPTT 60
           MAALSSI   SLSP +Y +QQ LH+A P  LRSS+VRFSGELDRR+MRG+SV+TRAGP+T
Sbjct: 1   MAALSSILFKSLSPAIYQSQQTLHLALPNCLRSSSVRFSGELDRRKMRGISVVTRAGPST 60

Query: 61  NQFIFAFVFPLSLLAITVVTALRIGDRLEQKFLEELAMNEAIREAEEENDDGTEVVIPRK 120
           +Q IFAFVFP SLLAITV TALRIGD+L+QKFLEELAMNEAIREAEEENDD  E V PRK
Sbjct: 61  SQLIFAFVFPFSLLAITVFTALRIGDKLDQKFLEELAMNEAIREAEEENDDVNETVFPRK 120

Query: 121 EEPALPRARNRPKREV 137
           EEPAL RARNRPKREV
Sbjct: 121 EEPALHRARNRPKREV 136
[Close]
BLAST of Spo01954.1 vs. UniProtKB/TrEMBL
Match: F6GX98_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01750 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.300e-28
Identity = 69/103 (66.99%), Postives = 89/103 (86.41%), Query Frame = 1 

		  

Query: 33  SSAVRFSGELDRRRMRGVSVITRAGPTTNQFIFAFVFPLSLLAITVVTALRIGDRLEQKF 92
           S AVRFSGEL RR+ RG+SV+TRAGP+T+ ++FAFVFPLSLLA+T+ T+LR+ D+LE++F
Sbjct: 33  SPAVRFSGELCRRKTRGLSVVTRAGPSTSSYVFAFVFPLSLLAVTIFTSLRVDDKLEREF 92

Query: 93  LEELAMNEAIREAEEENDDGTEVVIPRKEEPALPRARNRPKRE 136
           LEELA+NEA+REA+EE  D   V IP ++EPA+PR RNRPKRE
Sbjct: 93  LEELAVNEAMREADEEEGD---VAIPVEKEPAVPRTRNRPKRE 132
[Close]
BLAST of Spo01954.1 vs. UniProtKB/TrEMBL
Match: M5X9K9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026290mg PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.300e-23
Identity = 62/104 (59.62%), Postives = 85/104 (81.73%), Query Frame = 1 

		  

Query: 33  SSAVRFSGELDRRRMRGVSVITRAGPTTNQFIFAFVFPLSLLAITVVTALRIGDRLEQKF 92
           S A RFS     R+ RG++V+TRAGPTTNQ++FAFV PLSL+A+TV T++RI D+L+++F
Sbjct: 15  SPATRFSS----RQARGLTVVTRAGPTTNQYVFAFVMPLSLIAVTVFTSMRIADKLDEEF 74

Query: 93  LEELAMNEAIREAEEENDDGTEVVIPRKEEPALPRARNRPKREV 137
           LEE+A+N+AIRE +E++    EV +P +E+PALPR RNRPKREV
Sbjct: 75  LEEIAINQAIRETDEDD----EVDMPIEEKPALPRTRNRPKREV 110
[Close]
BLAST of Spo01954.1 vs. UniProtKB/TrEMBL
Match: A0A067L8P9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24488 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.500e-21
Identity = 68/140 (48.57%), Postives = 98/140 (70.00%), Query Frame = 1 

		  

Query: 7   ITSNSLSPTLYPTQQPLHVAF-----PTSLRSSAVRFSGELDRRRMRGVSVITRAGPTTN 66
           +  NS + TL    + +  +F     PTSL   A+RF+G  D +  RG+S++TRAGP+T 
Sbjct: 5   LAPNSATLTLPTASRSIRASFKPLLVPTSL---AIRFAG--DGQTKRGLSLVTRAGPSTT 64

Query: 67  QFIFAFVFPLSLLAITVVTALRIGDRLEQKFLEELAMNEAIREAEEENDDGTEVV-IPRK 126
            ++FAFVFP+SLL  TV+T+++I D+L++ +LEELA+N+AIREA+EE+DD  + + IP +
Sbjct: 65  SYVFAFVFPMSLLIATVITSIKIADKLDRDYLEELAINQAIREADEEDDDDDDAIDIPTE 124

Query: 127 EE---PAL--PRARNRPKRE 136
           EE   PAL   R RNRPKRE
Sbjct: 125 EEVKQPALRDTRTRNRPKRE 139
[Close]
BLAST of Spo01954.1 vs. TAIR (Arabidopsis)
Match: AT4G31560.1 (high chlorophyll fluorescence 153)

HSP 1 Score: 89.7 bits (221), Expect = 1.500e-18
Identity = 55/127 (43.31%), Postives = 81/127 (63.78%), Query Frame = 1 

		  

Query: 21  QPLHVAFPTS-----LRSSAVRFS-----GELDRRRMRGVSVITRAGPTTNQFIFAFVFP 80
           QP  ++FP S     L   A  F+     G    RR+R  SV+TRAGP+T+ ++ AF  P
Sbjct: 11  QPTQISFPASSSQPLLSPPANNFTDGGAGGLCLTRRIRDSSVVTRAGPSTSSYLLAFAIP 70

Query: 81  LSLLAITVVTALRIGDRLEQKFLEELAMNEAIREAEE-ENDDGTEVVIPRKEEPALPRAR 137
            +L+A TV T+++I D+L++ FLE++A+N+AI+ AE+ EN +G   +    +EP L R R
Sbjct: 71  ATLIAATVFTSIKIADKLDEDFLEDIALNQAIKAAEKGENGEGDISLDDVIQEPVLQRTR 130
The following BLAST results are available for this feature:
BLAST of Spo01954.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902200742|gb|KNA13816.1|1.3e-64100.hypothetical protein SOVF_1131... [more]
gi|731319649|ref|XP_010670384.1|3.4e-4979.4PREDICTED: uncharacterized pro... [more]
gi|225449921|ref|XP_002268521.1|1.9e-2866.9PREDICTED: uncharacterized pro... [more]
gi|596056794|ref|XP_007220962.1|1.9e-2359.6hypothetical protein PRUPE_ppa... [more]
gi|645251101|ref|XP_008231524.1|3.2e-2351.5PREDICTED: uncharacterized pro... [more]
back to top
BLAST of Spo01954.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R2S2_SPIOL8.9e-65100.Uncharacterized protein OS=Spi... [more]
A0A0J8CU96_BETVU2.3e-4979.4Uncharacterized protein OS=Bet... [more]
F6GX98_VITVI1.3e-2866.9Putative uncharacterized prote... [more]
M5X9K9_PRUPE1.3e-2359.6Uncharacterized protein (Fragm... [more]
A0A067L8P9_JATCU3.5e-2148.5Uncharacterized protein OS=Jat... [more]
back to top
BLAST of Spo01954.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo01954.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G31560.11.5e-1843.3high chlorophyll fluorescence ... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37753FAMILY NOT NAMEDcoord: 3..136
score: 5.2

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010190 cytochrome b6f complex assembly
biological_process GO:0046939 nucleotide phosphorylation
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006223 uracil salvage
biological_process GO:0044206 UMP salvage
biological_process GO:0032502 developmental process
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0010155 regulation of proton transport
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0046034 ATP metabolic process
biological_process GO:0016556 mRNA modification
biological_process GO:0010207 photosystem II assembly
cellular_component GO:0005840 ribosome
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0042651 thylakoid membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009523 photosystem II
molecular_function GO:0005524 ATP binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0004845 uracil phosphoribosyltransferase activity
molecular_function GO:0004017 adenylate kinase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0003735 structural constituent of ribosome
RNA-Seq Expression