Spo01792 (gene)

Overview
NameSpo01792
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRotundifolia-like protein
Locationchr1 : 26604444 .. 26607068 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTCAATCCTATGACCTCAAGTCACAAGGTGAGTTCTCTATCAACTTCAACAACTTATGTTGGCTGTGAAAATGCTACATAAGGGGTAGTTTATAAGGGCGGAGTAGTATATTTCTTATTTTTTTGGTAGCTAACTCTTATTAAGAGTGAGGTTGAGGTGGATGAAGAGAGAGATTAAGATGGAGAAAATAAGAGCTATACCCTTACCATTAATGCTCTAACTTAACAATTTTTCCAAACACATCTATTACGGTAAAATTTATCAAAATAATAACGGATTTTTCATGAAATACCCCCAAATTTTGGCGTAATTCACCAAATGTCCCTCGACTTTCGGAAATTCATAAAATACCTCTATTTCAATACTTAATACACGAGGTACCCTTATGACATCATCAACCCTAATTAACCCAATTAACCCACCCATTAACCCATTTTTCCCCTAATTATTTTTCTTTTCTCTCACACCCTTCCTTCTTCTCTTCCCTCCGTGGAAGTTACCTTGCTGCTACTGTCCTTCGTCTTCGTCGAACCCGCATCTCAGAAACGACCAAATCACCTCTCCAAAATCCCATAAAGTACCAGATCGTGGGAATTTGATTTTCCCCTTACTCCCTCTTCCCTTCTCTCCTTCTCCCTGTTCTTTCGTATCCCCTCTCATGAGCTGTGAACCCAGAAAATTGAAGAGGTTTAGAGAATTTGACATTAATCAATACCAAAGACGAAAGCTTTTGCTATTTAAACACGAAATTAGATATTTTTTTTGTTTTTTTGTGTGATAATTCATAGTCAATTGGATTGTTTAAATGCTTTTTATTGACTTCGTTAATCAAATCAATTACAAATTCAATATTGACTAATGAGTATTTAACCCAATTCCTGTTGTTAAATTTTGGAGTATGTTGTTTCATGTTTGTTCTTGGGTATTAAGTCTCGCTTTGCTGTAATCAATCGATCAATCAGTGATTGAGTATATGAGATTGGATTACCTGTTCGATGCAATTGAGACTTAACTCCTTTTTTTGATGGTGTGATTAGGATGACAAGGCAGATGAGATGAAGCTAGGTTGCTAAAGGCTTATGGCGAGTTGCCCAAAAATTGAAGAGAAAAATGAAGAGATTCAGAGAAAAACGAAGAAAAACCTTAGAGAAATTGATCGAGATTCTTGATTTTGCCTTCAATTTGATTTTGGGATTTCAATAAAATCATTAATTAATTTGTGAATCTGGGTTGCTTATTTTTGAAGGGTATTTAATAGCAGTGGTGGTGGTTGTTACGGTGGCAGTAGGAGGAGGAGAGAGAAGAAATGAAACGGTGGGCATGGACGCATGGTGGTGGAGGAATATGCAATCTAGGTTGATCGATTTTTGAGGGGTTAATGGAAGAAGGAAGAGAGTTAATGGAAGAAGGAAGGGGAGAGAGAAAAGAAAAAGAAATGGGTGGATTAGTGGGTTAATGTGCTTTGTTAGTGGGTGGATTGATTAGGGGTGTTAATTAGGGATTAGGTGGGTTAATTACATGTTAAGTGGTTGATTATGGCGTTGATGACGTCATTAATTATATTTGGTGTATTGACTTTTGAAACAAGGGTACCTCATGTATTAAATATTGAACTAATGGTATTTTATGAATTTCTGAAAGCCGAGAAGCATTTAGTGAATTACGCCAAAATTCGGGAGTATTTCATGAAAAATCCGTAATAACAATATCAACCACCTTGTTAAAAGGGATAATTCTTGCAGAGTACGGAGTATATAAAATCAAACAACCACCAAAAATTAAGGGTGAAAATCAAAACTACTAAGAATTTTTCAACTTACAAATACTCTCTTATTTCAATTCCGCTCCTATTTTCAATGAATCACCTCACTCCCATCCAAAGATGACGTGTGCCTTGGGAATTTACTTCAATTTCAACAGAAATCAAAATTTAGAACTTGGAAGTGCTACGCTAGATTACCAAAATCGTAGCAGTAACAAAAAAACTTTAAATAATTAAATAAATTAATATTAATAATTAATCAAGAATAATAGTGGGCTTATCGAAGTTAAATGGAGGCCCAGGTGATACCCACTGCCACACTCTTCTGTCACCCCTCTCTCTCTCTCTTCTTACCCCTAAATAAATAGCAGACCCCATCTTCTTCCTAAATCATCATCTTCAATCTCAATTTTCTCTCTCCTTTAAAATACCCAATTCTTCAAATTAATCAAAACCCCAGTAAAAATCTTCAAATTTATCAAAACCCCATTAGAAATATTGAGACTTTTCTTCAAATATCTGTTTTTTAGGGGTTTATTGTTCGGGTGATGATAATGATGGCTTCTGAAATTGCGTCTTCTTCAACATCAACACCAATACCTAAATCGATGTCGACAACAACGACAACACCGCCGCTTTACTTCGATGAAAAATGGAAACTGTCCAAGAAAGATGGGAGCAGAAGAAGCGTAGGGAGTTCCAGATCTTCGTCGTTTCTCTCAGGCAATTCGTCGAACAGAAGGTGTGCGTTTTCAAGAAAGTGCGCGAGTCTTGTTAAAGAACAGAGAGCAAGGTTTTACATTATGAGGAGGTGTGTAGTTATGCTAATTTGCTGGCGGGAGTATGGTGATTCCTGA

mRNA sequence

ATGGAGCTCAATCCTATGACCTCAAGTCACAAGGGGTTTATTGTTCGGGTGATGATAATGATGGCTTCTGAAATTGCGTCTTCTTCAACATCAACACCAATACCTAAATCGATGTCGACAACAACGACAACACCGCCGCTTTACTTCGATGAAAAATGGAAACTGTCCAAGAAAGATGGGAGCAGAAGAAGCGTAGGGAGTTCCAGATCTTCGTCGTTTCTCTCAGGCAATTCGTCGAACAGAAGGTGTGCGTTTTCAAGAAAGTGCGCGAGTCTTGTTAAAGAACAGAGAGCAAGGTTTTACATTATGAGGAGGTGTGTAGTTATGCTAATTTGCTGGCGGGAGTATGGTGATTCCTGA

Coding sequence (CDS)

ATGGAGCTCAATCCTATGACCTCAAGTCACAAGGGGTTTATTGTTCGGGTGATGATAATGATGGCTTCTGAAATTGCGTCTTCTTCAACATCAACACCAATACCTAAATCGATGTCGACAACAACGACAACACCGCCGCTTTACTTCGATGAAAAATGGAAACTGTCCAAGAAAGATGGGAGCAGAAGAAGCGTAGGGAGTTCCAGATCTTCGTCGTTTCTCTCAGGCAATTCGTCGAACAGAAGGTGTGCGTTTTCAAGAAAGTGCGCGAGTCTTGTTAAAGAACAGAGAGCAAGGTTTTACATTATGAGGAGGTGTGTAGTTATGCTAATTTGCTGGCGGGAGTATGGTGATTCCTGA

Protein sequence

MELNPMTSSHKGFIVRVMIMMASEIASSSTSTPIPKSMSTTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSNRRCAFSRKCASLVKEQRARFYIMRRCVVMLICWREYGDS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo01792.1Spo01792.1mRNA


Homology
[Close]
BLAST of Spo01792.1 vs. NCBI nr
Match: gi|902195069|gb|KNA12742.1| (hypothetical protein SOVF_123180 [Spinacia oleracea])

HSP 1 Score: 162.9 bits (411), Expect = 3.400e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

		  

Query: 38  MSTTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSNRRCAFSRKCASLVKEQR 97
           MSTTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSNRRCAFSRKCASLVKEQR
Sbjct: 1   MSTTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSNRRCAFSRKCASLVKEQR 60

Query: 98  ARFYIMRRCVVMLICWREYGDS 120
           ARFYIMRRCVVMLICWREYGDS
Sbjct: 61  ARFYIMRRCVVMLICWREYGDS 82
[Close]
BLAST of Spo01792.1 vs. NCBI nr
Match: gi|731315324|ref|XP_010690850.1| (PREDICTED: uncharacterized protein LOC104904325 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 136.0 bits (341), Expect = 4.400e-29
Identity = 73/99 (73.74%), Postives = 78/99 (78.79%), Query Frame = 1 

		  

Query: 21  MASEIASSSTSTPIPKSMSTTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSN 80
           M SEI  + TST         TTT  +YFDEKWKLSKK+GSRR+V S  SSSFLSGNSSN
Sbjct: 1   MGSEITQTPTST---------TTTSTIYFDEKWKLSKKEGSRRTVSSRSSSSFLSGNSSN 60

Query: 81  RRCAFSRKCASLVKEQRARFYIMRRCVVMLICWREYGDS 120
           RRCAFSRKCA LVKEQRA+FYIMRRCV MLICWREY DS
Sbjct: 61  RRCAFSRKCARLVKEQRAKFYIMRRCVAMLICWREYADS 90
[Close]
BLAST of Spo01792.1 vs. NCBI nr
Match: gi|1012337228|gb|KYP48508.1| (hypothetical protein KK1_029800 [Cajanus cajan])

HSP 1 Score: 122.9 bits (307), Expect = 3.900e-25
Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 1 

		  

Query: 37  SMSTTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSNRRCAFSRKCASLVKEQ 96
           S S +TT PPLYFDEKWKLSKK+GS RS   S S+ F+  NSS+R+CAF+ KCA LVKEQ
Sbjct: 5   SSSVSTTAPPLYFDEKWKLSKKEGSARSCSRSSSTPFIKSNSSHRKCAFASKCARLVKEQ 64

Query: 97  RARFYIMRRCVVMLICWREYGDS 120
           RARFYIMRRCV MLICWR+Y DS
Sbjct: 65  RARFYIMRRCVTMLICWRDYSDS 87
[Close]
BLAST of Spo01792.1 vs. NCBI nr
Match: gi|734420909|gb|KHN41105.1| (hypothetical protein glysoja_013447 [Glycine soja])

HSP 1 Score: 117.9 bits (294), Expect = 1.200e-23
Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 1 

		  

Query: 39  STTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSN-RRCAFSRKCASLVKEQR 98
           S+ +TTPP+YFDEKWKLSKK+GS RS  SS S+ F+  +SS+ RRCAF+ KCA LVKEQR
Sbjct: 3   SSVSTTPPMYFDEKWKLSKKEGSTRSRSSSTSTPFIKNSSSSQRRCAFASKCAKLVKEQR 62

Query: 99  ARFYIMRRCVVMLICWREYGDS 120
           ARFYIMRRCV MLICWR+Y DS
Sbjct: 63  ARFYIMRRCVTMLICWRDYSDS 84
[Close]
BLAST of Spo01792.1 vs. NCBI nr
Match: gi|356551701|ref|XP_003544212.1| (PREDICTED: uncharacterized protein LOC100803152 [Glycine max])

HSP 1 Score: 116.7 bits (291), Expect = 2.800e-23
Identity = 59/81 (72.84%), Postives = 67/81 (82.72%), Query Frame = 1 

		  

Query: 39  STTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSNRRCAFSRKCASLVKEQRA 98
           S+ +TTPPLYFDEKWKLSKK+GS RS   S S+ F+  +SS RRCAF+ KCA LVKEQRA
Sbjct: 3   SSVSTTPPLYFDEKWKLSKKEGSTRS--RSSSTPFIKNSSSQRRCAFASKCARLVKEQRA 62

Query: 99  RFYIMRRCVVMLICWREYGDS 120
           RFYIMRRCV MLICWR+Y DS
Sbjct: 63  RFYIMRRCVTMLICWRDYSDS 81
[Close]
BLAST of Spo01792.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1S1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_123180 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.400e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

		  

Query: 38  MSTTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSNRRCAFSRKCASLVKEQR 97
           MSTTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSNRRCAFSRKCASLVKEQR
Sbjct: 1   MSTTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSNRRCAFSRKCASLVKEQR 60

Query: 98  ARFYIMRRCVVMLICWREYGDS 120
           ARFYIMRRCVVMLICWREYGDS
Sbjct: 61  ARFYIMRRCVVMLICWREYGDS 82
[Close]
BLAST of Spo01792.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D257_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g025060 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.100e-29
Identity = 73/99 (73.74%), Postives = 78/99 (78.79%), Query Frame = 1 

		  

Query: 21  MASEIASSSTSTPIPKSMSTTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSN 80
           M SEI  + TST         TTT  +YFDEKWKLSKK+GSRR+V S  SSSFLSGNSSN
Sbjct: 1   MGSEITQTPTST---------TTTSTIYFDEKWKLSKKEGSRRTVSSRSSSSFLSGNSSN 60

Query: 81  RRCAFSRKCASLVKEQRARFYIMRRCVVMLICWREYGDS 120
           RRCAFSRKCA LVKEQRA+FYIMRRCV MLICWREY DS
Sbjct: 61  RRCAFSRKCARLVKEQRAKFYIMRRCVAMLICWREYADS 90
[Close]
BLAST of Spo01792.1 vs. UniProtKB/TrEMBL
Match: A0A151S170_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_029800 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.700e-25
Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 1 

		  

Query: 37  SMSTTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSNRRCAFSRKCASLVKEQ 96
           S S +TT PPLYFDEKWKLSKK+GS RS   S S+ F+  NSS+R+CAF+ KCA LVKEQ
Sbjct: 5   SSSVSTTAPPLYFDEKWKLSKKEGSARSCSRSSSTPFIKSNSSHRKCAFASKCARLVKEQ 64

Query: 97  RARFYIMRRCVVMLICWREYGDS 120
           RARFYIMRRCV MLICWR+Y DS
Sbjct: 65  RARFYIMRRCVTMLICWRDYSDS 87
[Close]
BLAST of Spo01792.1 vs. UniProtKB/TrEMBL
Match: I1JI03_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G248900 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.700e-24
Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 1 

		  

Query: 39  STTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSN-RRCAFSRKCASLVKEQR 98
           S+ +TTPP+YFDEKWKLSKK+GS RS  SS S+ F+  +SS+ RRCAF+ KCA LVKEQR
Sbjct: 3   SSVSTTPPMYFDEKWKLSKKEGSTRSRSSSTSTPFIKNSSSSQRRCAFASKCAKLVKEQR 62

Query: 99  ARFYIMRRCVVMLICWREYGDS 120
           ARFYIMRRCV MLICWR+Y DS
Sbjct: 63  ARFYIMRRCVTMLICWRDYSDS 84
[Close]
BLAST of Spo01792.1 vs. UniProtKB/TrEMBL
Match: A0A0B2S7B3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_013447 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.700e-24
Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 1 

		  

Query: 39  STTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSN-RRCAFSRKCASLVKEQR 98
           S+ +TTPP+YFDEKWKLSKK+GS RS  SS S+ F+  +SS+ RRCAF+ KCA LVKEQR
Sbjct: 3   SSVSTTPPMYFDEKWKLSKKEGSTRSRSSSTSTPFIKNSSSSQRRCAFASKCAKLVKEQR 62

Query: 99  ARFYIMRRCVVMLICWREYGDS 120
           ARFYIMRRCV MLICWR+Y DS
Sbjct: 63  ARFYIMRRCVTMLICWRDYSDS 84
[Close]
BLAST of Spo01792.1 vs. TAIR (Arabidopsis)
Match: AT2G39705.1 (ROTUNDIFOLIA like 8)

HSP 1 Score: 94.4 bits (233), Expect = 5.200e-20
Identity = 55/86 (63.95%), Postives = 64/86 (74.42%), Query Frame = 1 

		  

Query: 37  SMSTTTTTPPLYFDEKWKLSKKDG--SRRSVGSSRSSSFLSGNSSNRRCAFSRKCASLVK 96
           S S+ T +  ++ DEKWKLSKKDG  SR +  SS SSS  +G    R CAF+RKCA LVK
Sbjct: 3   SSSSLTRSGSVHLDEKWKLSKKDGGASRITRSSSTSSSSFNGKKQGR-CAFTRKCARLVK 62

Query: 97  EQRARFYIMRRCVVMLICWRE-YGDS 120
           EQRARFYIMRRCV+MLICWR+ Y DS
Sbjct: 63  EQRARFYIMRRCVIMLICWRDNYSDS 87
[Close]
BLAST of Spo01792.1 vs. TAIR (Arabidopsis)
Match: AT3G55515.1 (ROTUNDIFOLIA like 7)

HSP 1 Score: 59.7 bits (143), Expect = 1.400e-9
Identity = 36/82 (43.90%), Postives = 45/82 (54.88%), Query Frame = 1 

		  

Query: 38  MSTTTTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSGNSSNRRCAFSRKCASLVKEQR 97
           MS    +  L   +K  L    G+  +  SSR      G        F+RKC  LVKEQR
Sbjct: 1   MSRLRNSAQLQLSKKESLGDNGGALNTTRSSRQKQGKYG--------FTRKCGRLVKEQR 60

Query: 98  ARFYIMRRCVVMLICWREYGDS 120
           ARFYIMRRCVVMLICW ++ ++
Sbjct: 61  ARFYIMRRCVVMLICWTDHNNN 74
[Close]
BLAST of Spo01792.1 vs. TAIR (Arabidopsis)
Match: AT2G29125.1 (ROTUNDIFOLIA like 2)

HSP 1 Score: 57.8 bits (138), Expect = 5.400e-9
Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 1 

		  

Query: 26  ASSSTSTPIPKSMSTT---TTTPPLYFDEKWKLSKKDGSRRSVGSSRSSSFLSG----NS 85
           +SSS+ +   +S ST+   T +P        K S    S  S  SS  S   S     +S
Sbjct: 15  SSSSSKSKFSRSFSTSASSTKSPIFVRSSSTKCSVPSSSSSSSSSSSISRSFSRKERRSS 74

Query: 86  SNRRCAFSRKCASLVKEQRARFYIMRRCVVMLICWREYGDS 120
           S+   + ++K +SL KEQ+ARFYIMRRCV ML+CW ++GDS
Sbjct: 75  SSSSSSITQKYSSLAKEQKARFYIMRRCVAMLVCWHKHGDS 115
[Close]
BLAST of Spo01792.1 vs. TAIR (Arabidopsis)
Match: AT1G53708.1 (ROTUNDIFOLIA like 9)

HSP 1 Score: 55.8 bits (133), Expect = 2.000e-8
Identity = 26/39 (66.67%), Postives = 29/39 (74.36%), Query Frame = 1 

		  

Query: 80  NRRCAFSRKCASLVKEQRARFYIMRRCVVMLICWREYGD 119
           N+  AF+ KCASLVKEQRAR YI+RRC  ML CW   GD
Sbjct: 9   NKGHAFTSKCASLVKEQRARLYILRRCATMLCCWYIQGD 47
[Close]
BLAST of Spo01792.1 vs. TAIR (Arabidopsis)
Match: AT3G14362.1 (ROTUNDIFOLIA like 10)

HSP 1 Score: 55.5 bits (132), Expect = 2.700e-8
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 1 

		  

Query: 80  NRRCAFSRKCASLVKEQRARFYIMRRCVVMLICWREYGD 119
           N+  AF+ KC SLVKEQRAR YI+RRC  ML CW  +GD
Sbjct: 9   NKGHAFTSKCVSLVKEQRARLYILRRCATMLCCWYIHGD 47
The following BLAST results are available for this feature:
BLAST of Spo01792.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902195069|gb|KNA12742.1|3.4e-37100.hypothetical protein SOVF_1231... [more]
gi|731315324|ref|XP_010690850.1|4.4e-2973.7PREDICTED: uncharacterized pro... [more]
gi|1012337228|gb|KYP48508.1|3.9e-2572.2hypothetical protein KK1_02980... [more]
gi|734420909|gb|KHN41105.1|1.2e-2371.9hypothetical protein glysoja_0... [more]
gi|356551701|ref|XP_003544212.1|2.8e-2372.8PREDICTED: uncharacterized pro... [more]
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BLAST of Spo01792.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R1S1_SPIOL2.4e-37100.Uncharacterized protein OS=Spi... [more]
A0A0J8D257_BETVU3.1e-2973.7Uncharacterized protein OS=Bet... [more]
A0A151S170_CAJCA2.7e-2572.2Uncharacterized protein OS=Caj... [more]
I1JI03_SOYBN8.7e-2471.9Uncharacterized protein OS=Gly... [more]
A0A0B2S7B3_GLYSO8.7e-2471.9Uncharacterized protein OS=Gly... [more]
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BLAST of Spo01792.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01792.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G39705.15.2e-2063.9ROTUNDIFOLIA like 8[more]
AT3G55515.11.4e-943.9ROTUNDIFOLIA like 7[more]
AT2G29125.15.4e-940.5ROTUNDIFOLIA like 2[more]
AT1G53708.12.0e-866.6ROTUNDIFOLIA like 9[more]
AT3G14362.12.7e-864.1ROTUNDIFOLIA like 10[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012552DVLPFAMPF08137DVLcoord: 94..112
score: 8.2
NoneNo IPR availablePANTHERPTHR33102FAMILY NOT NAMEDcoord: 47..119
score: 2.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005622 intracellular
cellular_component GO:0016020 membrane
molecular_function GO:0005484 SNAP receptor activity
RNA-Seq Expression