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Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCAACTTATGCAGGAACATCGTCTTCAATGGCGGCTGCAACAAGTGGGTTGCTTCCACGTGTCCACGCCAACCACTCCTCCCGCTTTATAGCGTTGCCTTATCTCCCTCCTCGTACCTCTACTTCTTCTTTGAAGATCTTCTCCAACAATTTGTCTGGTATTTTTCTTTGCGGCATTCTGTCGAACACTTGGCTATCATCCTTGTTCTTTACGTACCTTGTTTGCTGTTTTTAGCTTTGATGTTTATTGGGGTTTGCTTATTGGTTTAGTTAATATCAGTGCTCTAATTGATTGACTGATTGTGTTGAATTTTAAAGTTTTGTCTTTGAACAACAAGCGTTGACCACTGTTGATATCTCAGAGTACATTGTAATTTCATGGTTTTGTCTTATTTGTTTCTAATATGTTTCCCAATTAGATGTGGAATTATGTTATTTGTTGGGAATTGAATAAAACCCAGATTATATCATTGCAATTAATCATAGTAGACTTGAACATTTTGAGACACTTGTATAGTTGTATATGTAAGAAGACCATATAGTTAGATGATCATATATTAATGTGTGGGAATTGGTTAAAGATCACCAAATGGGTTGTTTAATTCTCTAGCAATCATCATCAATCCAAAGGTAAAGATGACCATGAGACGACATCAATACATTGAGGGGTATTTTAGTAGAGGCTACCTATTGAGTTCACTGTCTTGCTAAACTGAAAGTGATCTACATATCCAGTTTTGATGGGAATTTGGGAACGAATGCAAATATTTTCTAACAACATAAAAAATGTCATAGTTTTGATATTGCCATCTATTAGCTGGGCGTAGGATGTTCAAACATGTGGGGTCATCCTCTAGCCAGTACGGTTACATAGTTTTGTAATATATTAACTGATTACAAATTTACAATGTGGCTAAGAAAGAGGAACTGGAATGGTAAAGATATACGACGTATGTGTTTTACTACGTATAATAAGTGTATTATGCGTCAAATGTGATCTTCATTTGGATTCTTTTGCTTATTCTCTTGCTGCCGTGCACTTCTTATTGTGTGGTTTGTGTCTGAGTGACCGAGTTCCTTAGTTTTTGTGAACTATATGTTACCGGAATTGGAATGTCTAGCGATTGATTATGGAATTATGATATGGAGTGTTTACATAACCCTTTTTGTGCCTGAGAAATCTCCTTTTGCTTGCATTCCTAATCTATCCAATTTTGGGGCATCTCTAAGCTAAACTGGTTTCCTGATTGAACTCATTGAAGGAATATCGCTCATGCTATTGTTTTGGTAACTTCTCCAAGAACATCCTTTTGCTTCTTTTAAAAAAAAAAAAATATTTTAAAAAAGTTCGCTTGGATATTGTCTTGGGGATGAAGTGAGTATTCTAAAGTTGAATAGAATGAATGCCTTTATTTTGGACATATGACTAAACAATTTGGAGTTTTAAAAGATTCTACGCTACTTGATTGTAAAGATTTGGTCACAAATGAAGAGCCATGTGATTTTTGACTTTGTAGCTGAAGATGTATACATAAGTACATAACAGCCCCCGGTAATCACCAGCTTACTTAAACACGCGGAGTTCATTAATAGCATTCAAGAACTTTCAGCTGTTGTGAAATTTTGTTGATACGTGGTTTTAGAATGTCTAACTCTTGTCTGTTTTGGCTACTTCTTTGCATAGCTGGTGCTTACCCTGTTCTATTTTTCTCTCTGCAGAGTCAAGGAGATTTTCTTCACTTCAGGTCAAAGCTTCCTCAACAGACGAAACCTCTGTTGATAGCAGTGAATTACTTAGTGACCTGAAAGAGAAGGTAGGTGTGAATTATGACCTTAAATGAACCCCTACTGCATTTGTTTCGTCATGGCTTAATTGTTGAAAACAATAATCTTTTCTTTTTGTTTAAACTTTTGCAGTGGGATAATGTTGAGAATAAGTCCACTGTACTTATATACGGTGGTGGTGCAGTAGTTGCAGTTTGGCTATCTTCCATTCTTGTTGGTGCTATCAACTCTGTTCCTCTGGTATGTGATTTTTCTTTTCCACTATACCCCTTCTTGGATCTGTTTTCTTGATAACTGGACAACTGGTTGTGTTTTAGAGTCCTTGGACTGTCACACATCAAAGTATATCTCCTTTCTGAATGCCTAGCTTGAACAGTATTTTACCCTCCCTAGTATTTGAAATTTGAATTACATCATTTTACTTCCCTTCGAACACCCCTTCCTAGCCGACAAACTAAAAAGAAAATTATTGTAGATAACTTGAAGGGTGATCAATTTAAGGAATATTGGGCCTCAGATTCCTTCATGTTTCCTTATTGTTGCTTTCTCTTGAGCTGGCTGAACCTAGTTAGTGAATCAGCTGAACTTACTTACCGTGAAGGAATCCGGACTTGTTATTTTGCCACAATTGAAGTCTCCGTGAAATTGTGAATACACTGTTGTTAAGTTTGTTATTGGGGTTTTAAAGATGAATTGAACCACAAGGTTGAATTACAGAACAAATTTGGAACATTTCCCCTGATAATTAGCATTTTTTGAAATTATGTTTGAGCCATAATTTACGTTGTTGTTATTATCAGCTTCCAAAGCTCATGGAATTGGTTGGGCTCGGATACACGGGATGGTTTGTTTACCGATACCTTCTTTTCAAGGTAAAGTTCCTGTTTGTTCTTTTCCGTGCACTGAATTTAAGCTGCTTACTTTTGTAATCTTTCTGAACCAATTAAAACAATTATCCTTTACTTGTAAGTCCAATTTCAGCTTCAACCCCAGTACCCTTCCTGCCCTGTTCAGCTAAGAAGAATTAAAGAAAGCCTTTTTGTTTTAAGTTAACATTGTCTTGTTTTTCCATCCTTATTACTTGCTTTTGCCTTTCTCACTTTACTAGTTAGTGCACGGAGGCCCTACTGATATTTGAGTCAATTTGACTCCTCATGCTGCTAAAATACGTTGTTTGTATATTCAATTACCTGTGTCACAATTTGGTGCGTCTCTTGCAATTAGTAACTTGTTTTTAAAATAAATTTCTCTTCGATTTAGCACTGAAACATTGCAAAGCTTAAAAGTAAGTATCATGATTATTGTCTTGCTTAATACTTTGTATAAAGCTCTTATCTTTGTATATTTTGAAATTCATGGGAATTAGATTTGCCGGTGGACAGTGGACAATCTTGATTAATCAAAAAAATTCATGAGCCAAAGAAAAAAGTGATTTCTTATTTAGCACCCAAATAATGCAAGTATCTTTTACTAGATGATCATTATAAGGCATTGCTTTCAACTGCTTTTTAAGAAGAAAAGCTCTACACTGTGATCAAAATTTTGCTCATCAAAACTGAATTTTTAATGTTAAACTACTGATGAAAGTGGGTTTTAGTGGAAGAAAATAGAAAGCAAAAGAAGGGGAAACAAGTGCCATGCTACTTTCACCATGAGTCCTTTTTTCTGTGATCATTATTTACGCATTGCTTAATTTTAGTTCCAAAAGGTAAAGGACGCTGACCTCCCTTTTCTTTCTTGTTTATGTGTCTTGTTCAGACTAGTAGAAAGGAACTCGCAGAAGACATTGAATCATTGAAGAAGAAAATTGCTGGAACTGAGTAAAATATCACCTAGACTAGCAATACTCAAAGTGAAGAGGAACTCGGTTCCCAATCATGTTGTATAATAGGCCATAGAGCTACTCCTATTATGTATCGCAATTGATTCTGTCTCCAGTTTTAGAATTGGAATGTTGATATGGATTGGATAAATGTACAAGTTTTTATGTAATTCAAGTGGCTTTTTGTTGCTCTGTTTTTCCTGCTGTAATTTACAGCAACGTTAGGCCGAATTGCATTTCATCATTTTTATGGTTATACACTGCAAATCTCTGATGTTATTATTCGAACATTTAGCAGTTGGATTTGTCAGGTACAATTGATCTTGGTATAATAGGTTGACACCTTGTTAACTGAAAGATGGCAGCAACTTATGCAGGAACATCGTCTTCAATGGCGGCTGCAACAAGTGGGTTGCTTCCACGTGTCCACGCCAACCACTCCTCCCGCTTTATAGCGTTGCCTTATCTCCCTCCTCGTACCTCTACTTCTTCTTTGAAGATCTTCTCCAACAATTTGTCTGAGTCAAGGAGATTTTCTTCACTTCAGGTCAAAGCTTCCTCAACAGACGAAACCTCTGTTGATAGCAGTGAATTACTTAGTGACCTGAAAGAGAAGTGGGATAATGTTGAGAATAAGTCCACTGTACTTATATACGGTGGTGGTGCAGTAGTTGCAGTTTGGCTATCTTCCATTCTTGTTGGTGCTATCAACTCTGTTCCTCTGCTTCCAAAGCTCATGGAATTGGTTGGGCTCGGATACACGGGATGGTTTGTTTACCGATACCTTCTTTTCAAGACTAGTAGAAAGGAACTCGCAGAAGACATTGAATCATTGAAGAAGAAAATTGCTGGAACTGAGTAAAATATCACCTAGACTAGCAATACTCAAAGTGAAGAGGAACTCGGTTCCCAATCATGTTGTATAATAGGCCATAGAGCTACTCCTATTATGTATCGCAATTGATTCTGTCTCCAGTTTTAGAATTGGAATGTTGATATGGATTGGATAAATGTACAAGTTTTTATGTAATTCAAGTGGCTTTTTGTTGCTCTGTTTTTCCTGCTGTAATTTACAGCAACGTTAGGCCGAATTGCATTTCATCATTTTTATGGTTATACACTGCAAATCTCTGATGTTATTATTCGAACATTTAGCAGTTGGATTTGTCAGGTACAATTGATCTTGGTATAATAGGTTGACACCTTGTTAACTGAAAG ATGGCAGCAACTTATGCAGGAACATCGTCTTCAATGGCGGCTGCAACAAGTGGGTTGCTTCCACGTGTCCACGCCAACCACTCCTCCCGCTTTATAGCGTTGCCTTATCTCCCTCCTCGTACCTCTACTTCTTCTTTGAAGATCTTCTCCAACAATTTGTCTGAGTCAAGGAGATTTTCTTCACTTCAGGTCAAAGCTTCCTCAACAGACGAAACCTCTGTTGATAGCAGTGAATTACTTAGTGACCTGAAAGAGAAGTGGGATAATGTTGAGAATAAGTCCACTGTACTTATATACGGTGGTGGTGCAGTAGTTGCAGTTTGGCTATCTTCCATTCTTGTTGGTGCTATCAACTCTGTTCCTCTGCTTCCAAAGCTCATGGAATTGGTTGGGCTCGGATACACGGGATGGTTTGTTTACCGATACCTTCTTTTCAAGACTAGTAGAAAGGAACTCGCAGAAGACATTGAATCATTGAAGAAGAAAATTGCTGGAACTGAGTAA MAATYAGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFSSLQVKASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSVPLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo01714.1 vs. NCBI nr
Match: gi|902173027|gb|KNA08205.1| (hypothetical protein SOVF_164650 [Spinacia oleracea]) HSP 1 Score: 309.7 bits (792), Expect = 3.100e-81 Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of Spo01714.1 vs. NCBI nr
Match: gi|731311434|ref|XP_010669522.1| (PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 280.0 bits (715), Expect = 2.700e-72 Identity = 149/168 (88.69%), Postives = 160/168 (95.24%), Query Frame = 1
BLAST of Spo01714.1 vs. NCBI nr
Match: gi|802694814|ref|XP_012083273.1| (PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Jatropha curcas]) HSP 1 Score: 213.0 bits (541), Expect = 4.000e-52 Identity = 119/169 (70.41%), Postives = 137/169 (81.07%), Query Frame = 1
BLAST of Spo01714.1 vs. NCBI nr
Match: gi|388500696|gb|AFK38414.1| (unknown [Lotus japonicus]) HSP 1 Score: 206.1 bits (523), Expect = 4.900e-50 Identity = 115/160 (71.88%), Postives = 135/160 (84.38%), Query Frame = 1
BLAST of Spo01714.1 vs. NCBI nr
Match: gi|590721553|ref|XP_007051646.1| (Uncharacterized protein TCM_005215 [Theobroma cacao]) HSP 1 Score: 204.9 bits (520), Expect = 1.100e-49 Identity = 115/163 (70.55%), Postives = 133/163 (81.60%), Query Frame = 1
BLAST of Spo01714.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLR5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_164650 PE=4 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 2.200e-81 Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of Spo01714.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D7L8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g003680 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 1.900e-72 Identity = 149/168 (88.69%), Postives = 160/168 (95.24%), Query Frame = 1
BLAST of Spo01714.1 vs. UniProtKB/TrEMBL
Match: A0A067K0D7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14304 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 2.800e-52 Identity = 119/169 (70.41%), Postives = 137/169 (81.07%), Query Frame = 1
BLAST of Spo01714.1 vs. UniProtKB/TrEMBL
Match: I3SDS2_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 3.400e-50 Identity = 115/160 (71.88%), Postives = 135/160 (84.38%), Query Frame = 1
BLAST of Spo01714.1 vs. UniProtKB/TrEMBL
Match: A0A061E0L7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_005215 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 7.600e-50 Identity = 115/163 (70.55%), Postives = 133/163 (81.60%), Query Frame = 1
BLAST of Spo01714.1 vs. ExPASy Swiss-Prot
Match: CUT1A_ARATH (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A PE=1 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 2.300e-47 Identity = 111/170 (65.29%), Postives = 134/170 (78.82%), Query Frame = 1
BLAST of Spo01714.1 vs. ExPASy Swiss-Prot
Match: CUT1D_ARATH (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana GN=CURT1D PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 9.300e-17 Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 1
BLAST of Spo01714.1 vs. ExPASy Swiss-Prot
Match: CUT1B_ARATH (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana GN=CURT1B PE=1 SV=2) HSP 1 Score: 79.3 bits (194), Expect = 4.300e-14 Identity = 46/141 (32.62%), Postives = 81/141 (57.45%), Query Frame = 1
BLAST of Spo01714.1 vs. ExPASy Swiss-Prot
Match: CUT1C_ARATH (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana GN=CURT1C PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.500e-11 Identity = 43/145 (29.66%), Postives = 76/145 (52.41%), Query Frame = 1
BLAST of Spo01714.1 vs. ExPASy Swiss-Prot
Match: SYE_TRIEI (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) GN=gltX PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.100e-7 Identity = 23/55 (41.82%), Postives = 43/55 (78.18%), Query Frame = 1
BLAST of Spo01714.1 vs. TAIR (Arabidopsis)
Match: AT4G01150.1 (unknown protein) HSP 1 Score: 189.9 bits (481), Expect = 1.300e-48 Identity = 111/170 (65.29%), Postives = 134/170 (78.82%), Query Frame = 1
BLAST of Spo01714.1 vs. TAIR (Arabidopsis)
Match: AT4G38100.1 (unknown protein) HSP 1 Score: 88.2 bits (217), Expect = 5.200e-18 Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 1
BLAST of Spo01714.1 vs. TAIR (Arabidopsis)
Match: AT2G46820.1 (photosystem I P subunit) HSP 1 Score: 79.3 bits (194), Expect = 2.400e-15 Identity = 46/141 (32.62%), Postives = 81/141 (57.45%), Query Frame = 1
BLAST of Spo01714.1 vs. TAIR (Arabidopsis)
Match: AT1G52220.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 69.3 bits (168), Expect = 2.500e-12 Identity = 43/145 (29.66%), Postives = 76/145 (52.41%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo01714.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo01714.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo01714.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo01714.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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