Spo01645 (gene) | SpinachBase

Overview


Name	Spo01645
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Remorin, putative
Location	chr2 : 49538124 .. 49540627 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTAGCCCACTAATAGTATGAGAGCAAACATTTTTCTTACAAAAAAAAAACAACCTGTCATTTTAATGTGTAGTTTATAAGAAAGATTAATCACAAAGAGACCTCAATTTAACTTGTTTAGACACAGAAGAAGAAATAAAATAAAATGACAGAAAAAGAGACCAAAAAAATTGTAGAAAGCAAATCAACGGATGGTGATGCACCATCATCATCATCCACCATCATCAAGGAGATATCAACGGCTGTTACTCCACCACCGGCGCCGGCAACTCCTAAGGCTACAGTTGCCGTCGTTGAAAGTACTTCCCTCCCTTCCTTTCCATTTTTTTCTGCTTATGAGCATGTGCTTTTTTTTTTATGTGTAATAGAATGACTAATTGATATACTTATTATGATGTTTAACAAACAGTTGAAGAGACTGAAATTCAGAGGAATAAGCAATCAGTTGACAGGGGTGAGTAAATAGTTAATGTTGGCACAACAAATTAATTCAGTTTCAGTTACTCATGATTATCTAATTAATTAGAGGACAATATACGACATAAATTAAATTCAGCTTCATTTATTATGAAATTTGTCATAGAGTATTCATGTTTGTTTGTTTGTTATAGATGTTGCATTGGCACATGTTGAGCAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTATGATGTTTAACAAACAGTTGAAGAGACTGAAATTCAGAGGAATAAGCAATCAGTTGACAGGGGTGAGTAAATAGTTAATGTTGGCACAACAAATTAATTCAGTTTCAGTTACTCATGATTATCTAATTAATTAGAGGACAATATACGACATAAATTAAATTCAGCTTCATTTATTATGAAATTTGTCATAGAGTATTCATGTTTGTTTGTTTGTTATAGATGTTGCATTGGCACATGTTGAGCAGGAAAAGAGGTTGTCTTTTATCAAGGCTTGGGAAGAAAGTGAAGAAACTAAAGCAGTCAACAAGTAAGTCATTTTACTCATCACATTACATTACATTACATGCTATCAAATCCCGTTTACATCATTCATTTGTACCGTTTAATTTCTATAGACTAAAGACAAACAATACGTGAGGAACCTCCTAACATGCTACCACTAACTTTTAGATCAAACCCGGGCCCGGGCCCGGCCCTGGTTTGTTGATGAGAATTATCAAATCTCGTTTACACCATTCAATTCCTTTGATAATGATGCGTTAATGATTTATGTGTTACATATCTCTTGCTTGGTATTTATCTATCTACATTTCAAGGCATGCTTGCTTGAATTATGGCTTTGTTGAGTCTATAATGGCAATAATACTACAATCATTAACCAATGTCCATTTCTAATTAAGGTTTGATTACACAAAACTATTGGATTCATTATAATAGTGGCTAAAAGAATTTCTTATAACTGAATGGTGATGTTTGATTGTTCGTTGGTACTGGACAGGGCTGAGAAGCTGATGTCTGCTCTGAACGCATGGGAGAACAGAAAGAAAGCATCCATAGACGCTAAACTCAAGTATATCGAGGTACCTTAATTAATTATTTCGTCAATCATCATGTAATACATTTTACATTAGTGCAACATTAGCCTTTTGAAATTTGATCATATGGTCAATATTCTGTCTACTTTCCACATTCAATTCAATTCATAAACTGAAATTGATTGAAACATAGCAGAAATTTGTAACTAGACTGTTCGCGTTTAATAAATACGTTGGGTGTTGATTGTTGAATGAGCAGGAAGAGCTGGAAAAGAAGAAGGCTGAATATGCAGAAAAGATGAAGAACATGGTAGCTCTAGTCCACAAGCAAACAGAAGAGAAGAGAGCAATAGTTCAAGCAAAAAAAGGAGAAGATATCCTCATGATCAAGGACAAGGCTGCTAAATACCGAGCCACTGGATATACCCCAAAGAAGATCCTTGGTTGCATCTCATTTTAGATCTTCCTCAGCCAGAAATATATAGTTACTTCAAGATAATGCAGTTTCAAAGGTGTAGCACTAAGCTAGATTGCACAACTTAAGTTTGTTTTTACGGCGTAAACAAGTTGTGTGAGAGATCAGTGTAATAGTACTGGTGATTGATTGTTAAAATTTTGGTTACAGTTGGGTTCTGAGACTTGGG

mRNA sequence

GGTAGCCCACTAATAGTATGAGAGCAAACATTTTTCTTACAAAAAAAAAACAACCTGTCATTTTAATGTGTAGTTTATAAGAAAGATTAATCACAAAGAGACCTCAATTTAACTTGTTTAGACACAGAAGAAGAAATAAAATAAAATGACAGAAAAAGAGACCAAAAAAATTGTAGAAAGCAAATCAACGGATGGTGATGCACCATCATCATCATCCACCATCATCAAGGAGATATCAACGGCTGTTACTCCACCACCGGCGCCGGCAACTCCTAAGGCTACAGTTGCCGTCGTTGAAATTGAAGAGACTGAAATTCAGAGGAATAAGCAATCAGTTGACAGGGTTGAAGAGACTGAAATTCAGAGGAATAAGCAATCAGTTGACAGGGATGTTGCATTGGCACATGTTGAGCAGGAAAAGAGGTTGTCTTTTATCAAGGCTTGGGAAGAAAGTGAAGAAACTAAAGCAGTCAACAAGGCTGAGAAGCTGATGTCTGCTCTGAACGCATGGGAGAACAGAAAGAAAGCATCCATAGACGCTAAACTCAAGTATATCGAGGAAGAGCTGGAAAAGAAGAAGGCTGAATATGCAGAAAAGATGAAGAACATGGTAGCTCTAGTCCACAAGCAAACAGAAGAGAAGAGAGCAATAGTTCAAGCAAAAAAAGGAGAAGATATCCTCATGATCAAGGACAAGGCTGCTAAATACCGAGCCACTGGATATACCCCAAAGAAGATCCTTGGTTGCATCTCATTTTAGATCTTCCTCAGCCAGAAATATATAGTTACTTCAAGATAATGCAGTTTCAAAGGTGTAGCACTAAGCTAGATTGCACAACTTAAGTTTGTTTTTACGGCGTAAACAAGTTGTGTGAGAGATCAGTGTAATAGTACTGGTGATTGATTGTTAAAATTTTGGTTACAGTTGGGTTCTGAGACTTGGG

Coding sequence (CDS)

ATGACAGAAAAAGAGACCAAAAAAATTGTAGAAAGCAAATCAACGGATGGTGATGCACCATCATCATCATCCACCATCATCAAGGAGATATCAACGGCTGTTACTCCACCACCGGCGCCGGCAACTCCTAAGGCTACAGTTGCCGTCGTTGAAATTGAAGAGACTGAAATTCAGAGGAATAAGCAATCAGTTGACAGGGTTGAAGAGACTGAAATTCAGAGGAATAAGCAATCAGTTGACAGGGATGTTGCATTGGCACATGTTGAGCAGGAAAAGAGGTTGTCTTTTATCAAGGCTTGGGAAGAAAGTGAAGAAACTAAAGCAGTCAACAAGGCTGAGAAGCTGATGTCTGCTCTGAACGCATGGGAGAACAGAAAGAAAGCATCCATAGACGCTAAACTCAAGTATATCGAGGAAGAGCTGGAAAAGAAGAAGGCTGAATATGCAGAAAAGATGAAGAACATGGTAGCTCTAGTCCACAAGCAAACAGAAGAGAAGAGAGCAATAGTTCAAGCAAAAAAAGGAGAAGATATCCTCATGATCAAGGACAAGGCTGCTAAATACCGAGCCACTGGATATACCCCAAAGAAGATCCTTGGTTGCATCTCATTTTAG

Protein sequence

MTEKETKKIVESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEETEIQRNKQSVDRVEETEIQRNKQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALNAWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILMIKDKAAKYRATGYTPKKILGCISF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo01645.1	Spo01645.1	mRNA

Homology

[Close]

BLAST of Spo01645.1 vs. NCBI nr
Match: gi|902171055|gb|KNA07946.1| (hypothetical protein SOVF_167180 [Spinacia oleracea])

HSP 1 Score: 327.0 bits (837), Expect = 2.300e-86
Identity = 187/204 (91.67%), Postives = 187/204 (91.67%), Query Frame = 1


		  
Query: 1   MTEKETKKIVESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEETEIQRN 60
           MTEKETKKIVESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEE EIQR 
Sbjct: 1   MTEKETKKIVESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEEAEIQRI 60

Query: 61  KQSVDRVEETEIQRNKQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALN 120
           K               QSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALN
Sbjct: 61  K---------------QSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALN 120

Query: 121 AWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILM 180
           AWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILM
Sbjct: 121 AWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILM 180

Query: 181 IKDKAAKYRATGYTPKKILGCISF 205
           IKDKAAKYRATGYTPKKILGCISF
Sbjct: 181 IKDKAAKYRATGYTPKKILGCISF 189

[Close]

BLAST of Spo01645.1 vs. NCBI nr
Match: gi|731311976|ref|XP_010672012.1| (PREDICTED: remorin-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 261.2 bits (666), Expect = 1.600e-66
Identity = 148/204 (72.55%), Postives = 170/204 (83.33%), Query Frame = 1


		  
Query: 1   MTEKETKKIVESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEETEIQRN 60
           M EK+ KK VE KST   AP SSSTI +E STA++PPPAPATP+ TVAVVE         
Sbjct: 1   MAEKQIKKSVEGKSTVIVAPPSSSTITEEKSTAISPPPAPATPEVTVAVVE--------- 60

Query: 61  KQSVDRVEETEIQRNKQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALN 120
                +VE+ E +RN+ SVDRD+ALAHVEQEKRLSFIKAWEESE+TKA+NKAEK  SAL+
Sbjct: 61  -----KVEDAEAKRNRPSVDRDIALAHVEQEKRLSFIKAWEESEQTKAINKAEKKFSALD 120

Query: 121 AWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILM 180
           AWEN KKAS++AKLK IEEELEKKKAEYAEK+KNMVA +HKQTEEKRA+VQAKKGE++LM
Sbjct: 121 AWENSKKASLEAKLKEIEEELEKKKAEYAEKIKNMVAQIHKQTEEKRAMVQAKKGEEVLM 180

Query: 181 IKDKAAKYRATGYTPKKILGCISF 205
           I++KAAKYRATGY PKKILGCISF
Sbjct: 181 IQEKAAKYRATGYAPKKILGCISF 190

[Close]

BLAST of Spo01645.1 vs. NCBI nr
Match: gi|731311978|ref|XP_010672021.1| (PREDICTED: uncharacterized protein At3g61260-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 237.3 bits (604), Expect = 2.400e-59
Identity = 138/204 (67.65%), Postives = 157/204 (76.96%), Query Frame = 1


		  
Query: 1   MTEKETKKIVESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEETEIQRN 60
           M EK+ KK VE KST   AP SSSTI +E STA++PPPAPATP+ TVAVVE         
Sbjct: 1   MAEKQIKKSVEGKSTVIVAPPSSSTITEEKSTAISPPPAPATPEVTVAVVE--------- 60

Query: 61  KQSVDRVEETEIQRNKQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALN 120
                                ++ALAHVEQEKRLSFIKAWEESE+TKA+NKAEK  SAL+
Sbjct: 61  ---------------------NIALAHVEQEKRLSFIKAWEESEQTKAINKAEKKFSALD 120

Query: 121 AWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILM 180
           AWEN KKAS++AKLK IEEELEKKKAEYAEK+KNMVA +HKQTEEKRA+VQAKKGE++LM
Sbjct: 121 AWENSKKASLEAKLKEIEEELEKKKAEYAEKIKNMVAQIHKQTEEKRAMVQAKKGEEVLM 174

Query: 181 IKDKAAKYRATGYTPKKILGCISF 205
           I++KAAKYRATGY PKKILGCISF
Sbjct: 181 IQEKAAKYRATGYAPKKILGCISF 174

[Close]

BLAST of Spo01645.1 vs. NCBI nr
Match: gi|728833226|gb|KHG12669.1| (Remorin [Gossypium arboreum])

HSP 1 Score: 176.4 bits (446), Expect = 5.100e-41
Identity = 106/198 (53.54%), Postives = 140/198 (70.71%), Query Frame = 1


		  
Query: 4   KETKKIVESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEETEIQRNKQS 63
           +E KK  E+++T    P+      +     V+PPPA   P+ + A+V +E+      K+ 
Sbjct: 3   EEVKKQAEAETTAAPPPAVEVPKAESEEKTVSPPPAEEKPEESKALVVVEKAPEPEPKKI 62

Query: 64  VDRVEETEIQRNKQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALNAWE 123
                      +  S DRD+ALA VE+ KRLSFIKAWEESE+TKA NK++K +SA+ AWE
Sbjct: 63  -----------SGGSHDRDIALAEVEKAKRLSFIKAWEESEKTKAENKSQKKLSAIVAWE 122

Query: 124 NRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILMIKD 183
           N KKAS++AKLK IEE+LEKKKAEYAEKMKN VAL+HK+ EEKRA+V+AK+GE++L  ++
Sbjct: 123 NSKKASLEAKLKKIEEQLEKKKAEYAEKMKNKVALLHKEAEEKRAMVEAKQGEEVLKAEE 182

Query: 184 KAAKYRATGYTPKKILGC 202
            AAKYRATG TPKK+LGC
Sbjct: 183 MAAKYRATGQTPKKVLGC 189

[Close]

BLAST of Spo01645.1 vs. NCBI nr
Match: gi|641867413|gb|KDO86097.1| (hypothetical protein CISIN_1g028704mg [Citrus sinensis])

HSP 1 Score: 174.5 bits (441), Expect = 1.900e-40
Identity = 92/124 (74.19%), Postives = 110/124 (88.71%), Query Frame = 1


		  
Query: 78  SVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALNAWENRKKASIDAKLKYI 137
           S DRDVALA VE+EKR SFIKAWEESE+TKA NKA+K +SA+ AWEN KKAS++AKLK I
Sbjct: 43  SHDRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWENSKKASLEAKLKKI 102

Query: 138 EEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILMIKDKAAKYRATGYTPKK 197
           EE+LE+KKAEYAEKMKN VALVHK+ EEKRA+V+A++GED+L  ++ AAKYRATG TPKK
Sbjct: 103 EEQLERKKAEYAEKMKNKVALVHKEAEEKRAMVEARRGEDVLKAEEIAAKYRATGTTPKK 162

Query: 198 ILGC 202
           +LGC
Sbjct: 163 LLGC 166

[Close]

BLAST of Spo01645.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QMX7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_167180 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.600e-86
Identity = 187/204 (91.67%), Postives = 187/204 (91.67%), Query Frame = 1


		  
Query: 1   MTEKETKKIVESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEETEIQRN 60
           MTEKETKKIVESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEE EIQR 
Sbjct: 1   MTEKETKKIVESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEEAEIQRI 60

Query: 61  KQSVDRVEETEIQRNKQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALN 120
           K               QSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALN
Sbjct: 61  K---------------QSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALN 120

Query: 121 AWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILM 180
           AWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILM
Sbjct: 121 AWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILM 180

Query: 181 IKDKAAKYRATGYTPKKILGCISF 205
           IKDKAAKYRATGYTPKKILGCISF
Sbjct: 181 IKDKAAKYRATGYTPKKILGCISF 189

[Close]

BLAST of Spo01645.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D392_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g005980 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.100e-66
Identity = 148/204 (72.55%), Postives = 170/204 (83.33%), Query Frame = 1


		  
Query: 1   MTEKETKKIVESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEETEIQRN 60
           M EK+ KK VE KST   AP SSSTI +E STA++PPPAPATP+ TVAVVE         
Sbjct: 1   MAEKQIKKSVEGKSTVIVAPPSSSTITEEKSTAISPPPAPATPEVTVAVVE--------- 60

Query: 61  KQSVDRVEETEIQRNKQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALN 120
                +VE+ E +RN+ SVDRD+ALAHVEQEKRLSFIKAWEESE+TKA+NKAEK  SAL+
Sbjct: 61  -----KVEDAEAKRNRPSVDRDIALAHVEQEKRLSFIKAWEESEQTKAINKAEKKFSALD 120

Query: 121 AWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILM 180
           AWEN KKAS++AKLK IEEELEKKKAEYAEK+KNMVA +HKQTEEKRA+VQAKKGE++LM
Sbjct: 121 AWENSKKASLEAKLKEIEEELEKKKAEYAEKIKNMVAQIHKQTEEKRAMVQAKKGEEVLM 180

Query: 181 IKDKAAKYRATGYTPKKILGCISF 205
           I++KAAKYRATGY PKKILGCISF
Sbjct: 181 IQEKAAKYRATGYAPKKILGCISF 190

[Close]

BLAST of Spo01645.1 vs. UniProtKB/TrEMBL
Match: A0A0B0NLI8_GOSAR (Remorin OS=Gossypium arboreum GN=F383_18453 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.500e-41
Identity = 106/198 (53.54%), Postives = 140/198 (70.71%), Query Frame = 1


		  
Query: 4   KETKKIVESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEETEIQRNKQS 63
           +E KK  E+++T    P+      +     V+PPPA   P+ + A+V +E+      K+ 
Sbjct: 3   EEVKKQAEAETTAAPPPAVEVPKAESEEKTVSPPPAEEKPEESKALVVVEKAPEPEPKKI 62

Query: 64  VDRVEETEIQRNKQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALNAWE 123
                      +  S DRD+ALA VE+ KRLSFIKAWEESE+TKA NK++K +SA+ AWE
Sbjct: 63  -----------SGGSHDRDIALAEVEKAKRLSFIKAWEESEKTKAENKSQKKLSAIVAWE 122

Query: 124 NRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILMIKD 183
           N KKAS++AKLK IEE+LEKKKAEYAEKMKN VAL+HK+ EEKRA+V+AK+GE++L  ++
Sbjct: 123 NSKKASLEAKLKKIEEQLEKKKAEYAEKMKNKVALLHKEAEEKRAMVEAKQGEEVLKAEE 182

Query: 184 KAAKYRATGYTPKKILGC 202
            AAKYRATG TPKK+LGC
Sbjct: 183 MAAKYRATGQTPKKVLGC 189

[Close]

BLAST of Spo01645.1 vs. UniProtKB/TrEMBL
Match: A0A067HDV4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028704mg PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.300e-40
Identity = 92/124 (74.19%), Postives = 110/124 (88.71%), Query Frame = 1


		  
Query: 78  SVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALNAWENRKKASIDAKLKYI 137
           S DRDVALA VE+EKR SFIKAWEESE+TKA NKA+K +SA+ AWEN KKAS++AKLK I
Sbjct: 43  SHDRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWENSKKASLEAKLKKI 102

Query: 138 EEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILMIKDKAAKYRATGYTPKK 197
           EE+LE+KKAEYAEKMKN VALVHK+ EEKRA+V+A++GED+L  ++ AAKYRATG TPKK
Sbjct: 103 EEQLERKKAEYAEKMKNKVALVHKEAEEKRAMVEARRGEDVLKAEEIAAKYRATGTTPKK 162

Query: 198 ILGC 202
           +LGC
Sbjct: 163 LLGC 166

[Close]

BLAST of Spo01645.1 vs. UniProtKB/TrEMBL
Match: V4TXM1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022286mg PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 5.100e-40
Identity = 116/216 (53.70%), Postives = 148/216 (68.52%), Query Frame = 1


		  
Query: 1   MTEKETKKIVESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEETEIQRN 60
           M E++ KK VE+++    AP+           A+ P PAPA P   VA  E   T++   
Sbjct: 1   MAEEQVKK-VEAETPAAPAPAP----------ALAPAPAPAVPNNDVAE-EKAVTQLHDQ 60

Query: 61  KQSVDR------VEETEIQRNKQ---------SVDRDVALAHVEQEKRLSFIKAWEESEE 120
           ++ VD       V++T     K+         S DRDVALA VE+EKR SFIKAWEESE+
Sbjct: 61  EKPVDDSKALAVVDQTPDSAKKKISGEKKISGSHDRDVALAEVEKEKRESFIKAWEESEK 120

Query: 121 TKAVNKAEKLMSALNAWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEE 180
           TKA NKA+K +SA+ AWEN KKAS++AKLK IEE+LE+KKAEYAEKMKN VALVHK+ EE
Sbjct: 121 TKAENKAQKKLSAVAAWENSKKASLEAKLKKIEEQLERKKAEYAEKMKNKVALVHKEAEE 180

Query: 181 KRAIVQAKKGEDILMIKDKAAKYRATGYTPKKILGC 202
           KRA+V+A++GED+L  ++ AAKYRATG TPKK+LGC
Sbjct: 181 KRAMVEARRGEDVLKAEEIAAKYRATGTTPKKLLGC 204

[Close]

BLAST of Spo01645.1 vs. ExPASy Swiss-Prot
Match: REMO_SOLTU (Remorin OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.300e-36
Identity = 94/185 (50.81%), Postives = 125/185 (67.57%), Query Frame = 1


		  
Query: 18  DAPSSSSTIIKEISTAVTPPPAPAT--PKATVAVVEIEETEIQRNKQSVDRVEETEIQRN 77
           +AP       K I     PPPA     P  + A+V +E            +  E   ++ 
Sbjct: 23  EAPKEVVADEKAIVAPALPPPAEEKEKPDDSKALVVVET-----------KAPEPADEKK 82

Query: 78  KQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALNAWENRKKASIDAKLK 137
           + S+DRD  LA V  EKR+S IKAWEESE++KA NKA+K +SA+ AWEN KKA+++A+LK
Sbjct: 83  EGSIDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELK 142

Query: 138 YIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILMIKDKAAKYRATGYTP 197
            +EE+LEKKKAEY EKMKN +AL+HK+ EEKRA+++AK+GED+L  ++ AAKYRATG  P
Sbjct: 143 KMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAP 196

Query: 198 KKILG 201
           KKILG
Sbjct: 203 KKILG 196

[Close]

BLAST of Spo01645.1 vs. ExPASy Swiss-Prot
Match: Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.000e-34
Identity = 96/209 (45.93%), Postives = 137/209 (65.55%), Query Frame = 1


		  
Query: 4   KETKKIVESKS---TDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEET---EI 63
           +E K  +ES+S       AP+ +         A  P P PA     VA  +I+     +I
Sbjct: 3   EEQKIALESESPAKVTTPAPADTPAPAPAEIPAPAPAPTPADVTKDVAEEKIQNPPPEQI 62

Query: 64  QRNKQSVDRVEE-----TEIQRNKQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKA 123
             + +++  VE+        +    S+DRDV LA + +EKRLSF++AWEESE++KA NKA
Sbjct: 63  FDDSKALTVVEKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKA 122

Query: 124 EKLMSALNAWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQA 183
           EK ++ ++AWEN KKA+++A+LK IEE+LEKKKAEYAE+MKN VA +HK+ EE+RA+++A
Sbjct: 123 EKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEA 182

Query: 184 KKGEDILMIKDKAAKYRATGYTPKKILGC 202
           K+GED+L  ++ AAKYRATG  PK   GC
Sbjct: 183 KRGEDVLKAEETAAKYRATGIVPKATCGC 211

[Close]

BLAST of Spo01645.1 vs. ExPASy Swiss-Prot
Match: REMO_ARATH (Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.600e-33
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1


		  
Query: 3   EKETKKI-VESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEETEIQRNK 62
           E++T K+ VES +    A   +   ++     +  PP P   KA   V +  E       
Sbjct: 4   EQKTSKVDVESPAVLAPAKEPTPAPVEVADEKIHNPP-PVESKALAVVEKPIE------- 63

Query: 63  QSVDRVEETEIQRNKQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALNA 122
                 E T  + +  S DRDV LA +E+EK+ SFIKAWEESE++KA N+A+K +S ++A
Sbjct: 64  ------EHTPKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHA 123

Query: 123 WENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILMI 182
           WEN KKA+++A+L+ IEE+LEKKKA+Y EKMKN VA +HK  EEKRA+V+AKKGE++L  
Sbjct: 124 WENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKA 183

Query: 183 KDKAAKYRATGYTPKKILGC 202
           ++  AKYRATG  PK   GC
Sbjct: 184 EEMGAKYRATGVVPKATCGC 189

[Close]

BLAST of Spo01645.1 vs. TAIR (Arabidopsis)
Match: AT5G23750.1 (Remorin family protein)

HSP 1 Score: 155.2 bits (391), Expect = 4.300e-38
Identity = 96/204 (47.06%), Postives = 137/204 (67.16%), Query Frame = 1


		  
Query: 1   MTEKETKKIVESKSTDGDAPSSSSTIIKEISTA-VTPPPAPATPKATVAVVEIEETEIQR 60
           M E+E KK+ E+ S     P+    + K  + A V P   P  P   +      E + + 
Sbjct: 1   MAEEEPKKVTETVSEP--TPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQED 60

Query: 61  NKQSVDRV-EETEIQRNKQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSA 120
           +K  V  V +E E ++ + SV+RD  LA VE EKR+S IKAWEE+E+ K  NKAEK +S+
Sbjct: 61  SKAIVPVVPKEVEEEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSS 120

Query: 121 LNAWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDI 180
           + +WEN KKA+++A+LK +EE+LEKKKAEY E+MKN +A +HK+ EEKRA+++AK+GE+I
Sbjct: 121 IGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEI 180

Query: 181 LMIKDKAAKYRATGYTPKKILGCI 203
           L  ++ AAKYRATG  PKK+ GC+
Sbjct: 181 LKAEELAAKYRATGTAPKKLFGCM 202

[Close]

BLAST of Spo01645.1 vs. TAIR (Arabidopsis)
Match: AT3G61260.1 (Remorin family protein)

HSP 1 Score: 145.6 bits (366), Expect = 3.400e-35
Identity = 96/209 (45.93%), Postives = 137/209 (65.55%), Query Frame = 1


		  
Query: 4   KETKKIVESKS---TDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEET---EI 63
           +E K  +ES+S       AP+ +         A  P P PA     VA  +I+     +I
Sbjct: 3   EEQKIALESESPAKVTTPAPADTPAPAPAEIPAPAPAPTPADVTKDVAEEKIQNPPPEQI 62

Query: 64  QRNKQSVDRVEE-----TEIQRNKQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKA 123
             + +++  VE+        +    S+DRDV LA + +EKRLSF++AWEESE++KA NKA
Sbjct: 63  FDDSKALTVVEKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKA 122

Query: 124 EKLMSALNAWENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQA 183
           EK ++ ++AWEN KKA+++A+LK IEE+LEKKKAEYAE+MKN VA +HK+ EE+RA+++A
Sbjct: 123 EKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEA 182

Query: 184 KKGEDILMIKDKAAKYRATGYTPKKILGC 202
           K+GED+L  ++ AAKYRATG  PK   GC
Sbjct: 183 KRGEDVLKAEETAAKYRATGIVPKATCGC 211

[Close]

BLAST of Spo01645.1 vs. TAIR (Arabidopsis)
Match: AT3G48940.1 (Remorin family protein)

HSP 1 Score: 144.4 bits (363), Expect = 7.500e-35
Identity = 72/123 (58.54%), Postives = 97/123 (78.86%), Query Frame = 1


		  
Query: 78  SVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALNAWENRKKASIDAKLKYI 137
           SV RD  L  +EQ+KR+S IKAWEE+E++K  NKA+K +S++ AWEN KKAS++A+LK I
Sbjct: 51  SVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKI 110

Query: 138 EEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILMIKDKAAKYRATGYTPKK 197
           EE+L KKKA Y E+MKN +A +HK+ EEKRA+ +AK+GED+L  ++ AAKYRATG  P K
Sbjct: 111 EEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTK 170

Query: 198 ILG 201
           + G
Sbjct: 171 LFG 173

[Close]

BLAST of Spo01645.1 vs. TAIR (Arabidopsis)
Match: AT2G45820.1 (Remorin family protein)

HSP 1 Score: 141.7 bits (356), Expect = 4.900e-34
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1


		  
Query: 3   EKETKKI-VESKSTDGDAPSSSSTIIKEISTAVTPPPAPATPKATVAVVEIEETEIQRNK 62
           E++T K+ VES +    A   +   ++     +  PP P   KA   V +  E       
Sbjct: 4   EQKTSKVDVESPAVLAPAKEPTPAPVEVADEKIHNPP-PVESKALAVVEKPIE------- 63

Query: 63  QSVDRVEETEIQRNKQSVDRDVALAHVEQEKRLSFIKAWEESEETKAVNKAEKLMSALNA 122
                 E T  + +  S DRDV LA +E+EK+ SFIKAWEESE++KA N+A+K +S ++A
Sbjct: 64  ------EHTPKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHA 123

Query: 123 WENRKKASIDAKLKYIEEELEKKKAEYAEKMKNMVALVHKQTEEKRAIVQAKKGEDILMI 182
           WEN KKA+++A+L+ IEE+LEKKKA+Y EKMKN VA +HK  EEKRA+V+AKKGE++L  
Sbjct: 124 WENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKA 183

Query: 183 KDKAAKYRATGYTPKKILGC 202
           ++  AKYRATG  PK   GC
Sbjct: 184 EEMGAKYRATGVVPKATCGC 189

[Close]

BLAST of Spo01645.1 vs. TAIR (Arabidopsis)
Match: AT4G00670.1 (Remorin family protein)

HSP 1 Score: 74.7 bits (182), Expect = 7.300e-14
Identity = 38/107 (35.51%), Postives = 71/107 (66.36%), Query Frame = 1


		  
Query: 91  EKRLSFIKAWEESEETKAVNKAEKLMSALNAWENRKKASIDAKLKYIEEELEKKKAEYAE 150
           +++   IKAW+E + TK  NK +K +  ++ WE +K   I+++L  I+ +++ KK E +E
Sbjct: 11  DEQSKVIKAWKELKITKVNNKTQKKLLDISGWEKKKTTKIESELARIQRKMDSKKMEKSE 70

Query: 151 KMKNMVALVHKQTEEKRAIVQAKKGEDILMIKDKAAKYRATGYTPKK 198
           K++N  A VH + ++K+A VQ ++ ++IL  ++ AA+++A G  PKK
Sbjct: 71  KLRNEKAAVHAKAQKKKADVQTRRAQEILDAEEAAARFQAAGKIPKK 117

The following BLAST results are available for this feature:

BLAST of Spo01645.1 vs. NCBI nr
BLAST of Spo01645.1 vs. UniProtKB/TrEMBL
BLAST of Spo01645.1 vs. ExPASy Swiss-Prot
BLAST of Spo01645.1 vs. TAIR (Arabidopsis)

BLAST of Spo01645.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902171055\|gb\|KNA07946.1\|	2.3e-86	91.6	hypothetical protein SOVF_1671...	[more]
gi\|731311976\|ref\|XP_010672012.1\|	1.6e-66	72.5	PREDICTED: remorin-like isofor...	[more]
gi\|731311978\|ref\|XP_010672021.1\|	2.4e-59	67.6	PREDICTED: uncharacterized pro...	[more]
gi\|728833226\|gb\|KHG12669.1\|	5.1e-41	53.5	Remorin [Gossypium arboreum]	[more]
gi\|641867413\|gb\|KDO86097.1\|	1.9e-40	74.1	hypothetical protein CISIN_1g0...	[more]

BLAST of Spo01645.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QMX7_SPIOL	1.6e-86	91.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8D392_BETVU	1.1e-66	72.5	Uncharacterized protein OS=Bet...	[more]
A0A0B0NLI8_GOSAR	3.5e-41	53.5	Remorin OS=Gossypium arboreum ...	[more]
A0A067HDV4_CITSI	1.3e-40	74.1	Uncharacterized protein OS=Cit...	[more]
V4TXM1_9ROSI	5.1e-40	53.7	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo01645.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
REMO_SOLTU	1.3e-36	50.8	Remorin OS=Solanum tuberosum P...	[more]
Y3126_ARATH	6.0e-34	45.9	Uncharacterized protein At3g61...	[more]
REMO_ARATH	8.6e-33	46.5	Remorin OS=Arabidopsis thalian...	[more]

BLAST of Spo01645.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G23750.1	4.3e-38	47.0	Remorin family protein	[more]
AT3G61260.1	3.4e-35	45.9	Remorin family protein	[more]
AT3G48940.1	7.5e-35	58.5	Remorin family protein	[more]
AT2G45820.1	4.9e-34	46.5	Remorin family protein	[more]
AT4G00670.1	7.3e-14	35.5	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 93..197 score: 1.4
None	No IPR available	unknown	Coil	Coil	coord: 50..70 score: -coord: 127..158 scor
None	No IPR available	PANTHER	PTHR31775	FAMILY NOT NAMED	coord: 1..204 score: 2.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo05698	0.67	Barchart \| Table
Spo24376	0.67	Barchart \| Table