Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCCATCACACAAAAAAAGGAAATGACTTCTTATGACCATGACACGGTGCTCTGTTCGGCGTTGTTTGTACACGAAACTTTTAAAAAAGTGACTTTAAAGCCCTAAATAAACCCTTTGCCACCCTCATAGTCATCAACGACATATTAAGACGACACAAATCATATTCTCAAGCAACTCAAAAAAAAAAAAAATGGCTTCTATGATTTTCTCTGACTGTTCATCCTCCGCGACTGCTCGTCTTCTCCCACTCCGCTGCCACAAACTCCACCGTAGCTGCAGCGTTCTCTCTTTCTGTCGTCGGGTTTCTTTACCTCTTACCTCCACAAGGCCTTTATTACCTTCTCTCTCCTCCCTTCAAGCTCATGTTTCCTCAACTTTTGTTTCAGGTATTAATCTTCTTTTGTCAATAAAATTCGTTAATTGATGCAATTGAGATCATCCCTTTTCGCTTTATTGTTTGTTTGTGCCAATTTAGTATCTGGGGTTTCGTCCTTTTCTGTATTTTTTTTTTGGAAATTCATTGGCGCATTTTATCGAACACCTCTAAGGCTAACTGAAGTTTTTTTTCGTTTTTCTGTATTGATTAATTTTTTTCTGTTGAATTTGATGTGGGCTTATGGAAATTGGTGGGGTTTACTGTGGATTTAATTCAAAGTGTTAAGAAATTGTGTTCATGTTGATGATGATGTTGTTGTAAAATTGGAGCTATGATTTCTAAGTTCCATCTAAGAGTTTATGATGACATTTGAATTAACTAAGAATCCCGTCCGTGCTTCATGATAATGGCAGTTTTTTTTTTTTTTTTGAGTGATCATGATAATGGCAGTTGAAATGCTGTAGTTGAGGTATTCATTAAAGAAAACATGGAACGATTCTTTGCAAGTTTCTGTTACAGCTAAAATGGCAACCGAGAGTTCTGCAATAGTGATTGATGGTAAGTCGGTGGCGAAGCAAATTAGGGAAGAGATAGCTGTTGAAATAGCGAGAATGAGAGAAGCTACCGGTATTGTTCCGGGGTTGGCTGTGATCCTTGTTGGGGATAGAAAGGATTCTGCAACGTATGTTCGTAATAAGAAGAAAGCTTGTGATGGAGTGGGGATTAATTCTTTCGAAGTAAATTTGCCAGGAGATACAACAGAACAGGAAGTGCTCAACTCTATAACCAAGTTCAATGAAGATCCTTCAGTTCATGGAATACTTGTTCAGTTACCTCTTCCTAAGGTATGCACCTTGGAATTCATTGGTTCATCTTGTGTATAATTTGTGGTTATATCTTGAGACTGAAACTTATTCTGATGTTATTTTTTTGTTGGGGAAGAGATTCAAAAATGATTGTTTTATTAGGTCAGTACTATTATGTGTTCTACGCTGACTCTTGTGAAGTAGTGTGTTTGCAGTCTGATACATATACCAAAACACCAGAAAGGTGCTGTTTGTCAGAAATTGGTTCTTTACTGTCGTGTTTACCTGTATTTTCCTGGATAATTTTCAATAGAATAGTGGACAACTTTCTTTTAAACAACATTCTTTTATGGGGATTTTGCCTGAAATGTAGTGTACACCAACTCTAGGGGAGTGTTTGGTTTGGTGTAAAACGTTTTCTTGGAAAATGATTTTCCACTTTCAGCCATTTTACATTGTCTGGTGTGGCAAGGGGTGAAAAATAATTTTCCTTAACTCCCCACGGTATCCAAGTTGAGAGATATAAATTGAACAAGGCCGCCCCCTATTGGGATGCACCATCAAACCTAAATTAGGTTTATCCGCTAAAAACTATGTTCGAGCAGTTTATAAATGTCTTCGCGATGGACTTGATTTTACCAAAGATGATGAAAACGTGAACTCCCAGCCGTTTATGCATTGGAGAGACCGTTTCCTATTTTGTGCCGAAGCTATTTATAAAGCCCAAGCCGAAACCGGCGAAATCAAAGGGCATTACTTGGATGCTACCGCGGGTGCATGCGAAGATATGATAAGAAGGGCTGTATTTGCCAGAGAATTGGGTGTTCCTATTATACTGCATGGCTAGATAATGATCTACTTCTTCACACCAGAAAAACCTTTTCCATTTAAAAGGAAAGGAAACCACTTTTCCAACTTACCTCCCTCTTCCTTCTCCCCAACAATCCTCACCCATTTTCCTTTTTCTATGAATTTTCTTGTAAGTAACCAAATAAAGGAAAACTAGTTTGGAATTCTGTTTTTCTTTGGAAAATGTTTTCAATGGACTATCATTTTTCACTGAAAACGTTTTACTCCAATTCAAACGGAGCCTGGATATGAGATACGTGTTGGCGACTGTCTAATTTCTCCAACTTTTCTTCCCTGTATTCTGCGGACTCCTTGTCACTTTTTCGAATAAATTATTTTTTGACTGGTATGCTGATAAAATTCTTGCTTTCCTTAATGGACTTTGCAGCATATGAATGAGGAGAAAATTCTGAATGCTGTTGGAATAGAAAAGGATGTTGATGGATTTCACCCTTTGAATATTGGTCGTCTTGCAATGCGGGGTAGAGAACCCTTGTTTGTCCCATGTACACCTAAAGGCTGCATAGAGCTATTGCATAGATATGGAATTCAAATAAAAGGGAAAAAGGCAGTTGTGATTGGCCGTAGTAATATAGTTGGGATGCCTGCTGCTCTTTTGCTGCAAGTAAGTTCTTTATGTTCGTTCATATTCTTCCTGTATGCAAGAAATCCATGTCTATATTGAACTTTCCTTTCTTTTATTTTTCATGGATACTTACACTACAATATGTTATATGAACGAACAATTCTGTTTGCAGAGGGAAGATGCTACTGTTACTATAGTTCATTCTAGAACAAACAATCCCGAGGATATCATAAGAGAAGCAGATATTATAATTTCTGCTGTAGGACAAGCAAACATGGTTAGGGGTAGCTGGATTAAGCCTGGTGCTGTTATTATCGATGTTGGGATCAATCCAGTTGAGGTAAACCTAGAGCTTCTCATGTGCTCAACTACTTCCTTTCATGTTCAAATAACTTATTGTCGAACATGTTATAATATCCTATCTTCTTTAGATTTCCTATTAATAGAATGGAAATATTGGCAGCATATGCACATCCACGAAATCCATGTACCTCGATTATGATCTTTAAACAATAATATGGATTGTTAACATTACACTTTAGCACTATAAAAATTAATAGAAAATTAGGAAGTGTCGCCAATAATACTCTTAATGCAGAATAAGCCTCGTTTAGCCTTTTTGAAATAAAATAAAATTGAAAGCTTTTATTTGTTTGGAGCTTAGAAAACTCAAGACACATATACGGAGTATTTGTTTCAGAACAGAGGGATAAAACTGATACCAACAGCACATTTGACATTTAGAATATACTTTAAGTTATGTTTTCTCATGTCAAACATTTTTACTAAGATTCACTTGCAAAACAGGATCCAGAAAGTCCTCGAGGATATCGGTTAGTTGGAGATGTTTGCTATGAAGAGGTTGTCAAGGTTGCTTCTGCTGTTACCCCTGTGCCTGGAGGCGTTGGTCCAATGACCATTGCAATGCTTCTTTCAAATACTCTCAGTTCAGCAAAAAGGATGCACAATTTCAACTGATAATGCAGTTGATAGTTTCAGATTAGGAAGGTAGAAAACAATTTACATGGTAGTGTGGCACACTCATTAGACCATGAGTTTGCTACAACTTATTTTTGTTTCCCTCCAAATTTGTGGGGGGAAAGGCACAACAACAAATTTCGAATATAAAGAACAATATTGTACGGAGTAGATTATTTGGGGCCTACCTTATTGCTCCCGGGTGTCGGAATCGCCTGTTGTGTTCTTATTGGCATTTGCACTTGTGATATAAGGGGGGCTGAGTGACATTTGCCTGATACAAGCCCTGTTTGTTGTAAAAGAGAAGATGATTTTACTCAGAAGTCTCTGTATGAAAATTATTGGATGTTTTGGCCTAAGACAAGTTTCTTCTGGTATGTGTATGACCTTATTGTCTTATTGGTAAGATTGGTTGGAAGAATCAAACAAGTCCACAAGCAA TTTTCCATCACACAAAAAAAGGAAATGACTTCTTATGACCATGACACGGTGCTCTGTTCGGCGTTGTTTGTACACGAAACTTTTAAAAAAGTGACTTTAAAGCCCTAAATAAACCCTTTGCCACCCTCATAGTCATCAACGACATATTAAGACGACACAAATCATATTCTCAAGCAACTCAAAAAAAAAAAAAATGGCTTCTATGATTTTCTCTGACTGTTCATCCTCCGCGACTGCTCGTCTTCTCCCACTCCGCTGCCACAAACTCCACCGTAGCTGCAGCGTTCTCTCTTTCTGTCGTCGGGTTTCTTTACCTCTTACCTCCACAAGGCCTTTATTACCTTCTCTCTCCTCCCTTCAAGCTCATGTTTCCTCAACTTTTGTTTCAGTTTCTGTTACAGCTAAAATGGCAACCGAGAGTTCTGCAATAGTGATTGATGGTAAGTCGGTGGCGAAGCAAATTAGGGAAGAGATAGCTGTTGAAATAGCGAGAATGAGAGAAGCTACCGGTATTGTTCCGGGGTTGGCTGTGATCCTTGTTGGGGATAGAAAGGATTCTGCAACGTATGTTCGTAATAAGAAGAAAGCTTGTGATGGAGTGGGGATTAATTCTTTCGAAGTAAATTTGCCAGGAGATACAACAGAACAGGAAGTGCTCAACTCTATAACCAAGTTCAATGAAGATCCTTCAGTTCATGGAATACTTGTTCAGTTACCTCTTCCTAAGCATATGAATGAGGAGAAAATTCTGAATGCTGTTGGAATAGAAAAGGATGTTGATGGATTTCACCCTTTGAATATTGGTCGTCTTGCAATGCGGGGTAGAGAACCCTTGTTTGTCCCATGTACACCTAAAGGCTGCATAGAGCTATTGCATAGATATGGAATTCAAATAAAAGGGAAAAAGGCAGTTGTGATTGGCCGTAGTAATATAGTTGGGATGCCTGCTGCTCTTTTGCTGCAAAGGGAAGATGCTACTGTTACTATAGTTCATTCTAGAACAAACAATCCCGAGGATATCATAAGAGAAGCAGATATTATAATTTCTGCTGTAGGACAAGCAAACATGGTTAGGGGTAGCTGGATTAAGCCTGGTGCTGTTATTATCGATGTTGGGATCAATCCAGTTGAGGATCCAGAAAGTCCTCGAGGATATCGGTTAGTTGGAGATGTTTGCTATGAAGAGGTTGTCAAGGTTGCTTCTGCTGTTACCCCTGTGCCTGGAGGCGTTGGTCCAATGACCATTGCAATGCTTCTTTCAAATACTCTCAGTTCAGCAAAAAGGATGCACAATTTCAACTGATAATGCAGTTGATAGTTTCAGATTAGGAAGGTAGAAAACAATTTACATGGTAGTGTGGCACACTCATTAGACCATGAGTTTGCTACAACTTATTTTTGTTTCCCTCCAAATTTGTGGGGGGAAAGGCACAACAACAAATTTCGAATATAAAGAACAATATTGTACGGAGTAGATTATTTGGGGCCTACCTTATTGCTCCCGGGTGTCGGAATCGCCTGTTGTGTTCTTATTGGCATTTGCACTTGTGATATAAGGGGGGCTGAGTGACATTTGCCTGATACAAGCCCTGTTTGTTGTAAAAGAGAAGATGATTTTACTCAGAAGTCTCTGTATGAAAATTATTGGATGTTTTGGCCTAAGACAAGTTTCTTCTGGTATGTGTATGACCTTATTGTCTTATTGGTAAGATTGGTTGGAAGAATCAAACAAGTCCACAAGCAA ATGGCTTCTATGATTTTCTCTGACTGTTCATCCTCCGCGACTGCTCGTCTTCTCCCACTCCGCTGCCACAAACTCCACCGTAGCTGCAGCGTTCTCTCTTTCTGTCGTCGGGTTTCTTTACCTCTTACCTCCACAAGGCCTTTATTACCTTCTCTCTCCTCCCTTCAAGCTCATGTTTCCTCAACTTTTGTTTCAGTTTCTGTTACAGCTAAAATGGCAACCGAGAGTTCTGCAATAGTGATTGATGGTAAGTCGGTGGCGAAGCAAATTAGGGAAGAGATAGCTGTTGAAATAGCGAGAATGAGAGAAGCTACCGGTATTGTTCCGGGGTTGGCTGTGATCCTTGTTGGGGATAGAAAGGATTCTGCAACGTATGTTCGTAATAAGAAGAAAGCTTGTGATGGAGTGGGGATTAATTCTTTCGAAGTAAATTTGCCAGGAGATACAACAGAACAGGAAGTGCTCAACTCTATAACCAAGTTCAATGAAGATCCTTCAGTTCATGGAATACTTGTTCAGTTACCTCTTCCTAAGCATATGAATGAGGAGAAAATTCTGAATGCTGTTGGAATAGAAAAGGATGTTGATGGATTTCACCCTTTGAATATTGGTCGTCTTGCAATGCGGGGTAGAGAACCCTTGTTTGTCCCATGTACACCTAAAGGCTGCATAGAGCTATTGCATAGATATGGAATTCAAATAAAAGGGAAAAAGGCAGTTGTGATTGGCCGTAGTAATATAGTTGGGATGCCTGCTGCTCTTTTGCTGCAAAGGGAAGATGCTACTGTTACTATAGTTCATTCTAGAACAAACAATCCCGAGGATATCATAAGAGAAGCAGATATTATAATTTCTGCTGTAGGACAAGCAAACATGGTTAGGGGTAGCTGGATTAAGCCTGGTGCTGTTATTATCGATGTTGGGATCAATCCAGTTGAGGATCCAGAAAGTCCTCGAGGATATCGGTTAGTTGGAGATGTTTGCTATGAAGAGGTTGTCAAGGTTGCTTCTGCTGTTACCCCTGTGCCTGGAGGCGTTGGTCCAATGACCATTGCAATGCTTCTTTCAAATACTCTCAGTTCAGCAAAAAGGATGCACAATTTCAACTGA MASMIFSDCSSSATARLLPLRCHKLHRSCSVLSFCRRVSLPLTSTRPLLPSLSSLQAHVSSTFVSVSVTAKMATESSAIVIDGKSVAKQIREEIAVEIARMREATGIVPGLAVILVGDRKDSATYVRNKKKACDGVGINSFEVNLPGDTTEQEVLNSITKFNEDPSVHGILVQLPLPKHMNEEKILNAVGIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYGIQIKGKKAVVIGRSNIVGMPAALLLQREDATVTIVHSRTNNPEDIIREADIIISAVGQANMVRGSWIKPGAVIIDVGINPVEDPESPRGYRLVGDVCYEEVVKVASAVTPVPGGVGPMTIAMLLSNTLSSAKRMHNFN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo01638.1 vs. NCBI nr
Match: gi|902204958|gb|KNA15027.1| (hypothetical protein SOVF_101840 isoform A [Spinacia oleracea]) HSP 1 Score: 703.4 bits (1814), Expect = 2.200e-199 Identity = 364/369 (98.64%), Postives = 365/369 (98.92%), Query Frame = 1
BLAST of Spo01638.1 vs. NCBI nr
Match: gi|902175493|gb|KNA08608.1| (hypothetical protein SOVF_161080 isoform B [Spinacia oleracea]) HSP 1 Score: 693.3 bits (1788), Expect = 2.200e-196 Identity = 358/369 (97.02%), Postives = 361/369 (97.83%), Query Frame = 1
BLAST of Spo01638.1 vs. NCBI nr
Match: gi|902175492|gb|KNA08607.1| (hypothetical protein SOVF_161080 isoform A [Spinacia oleracea]) HSP 1 Score: 681.8 bits (1758), Expect = 6.700e-193 Identity = 354/369 (95.93%), Postives = 357/369 (96.75%), Query Frame = 1
BLAST of Spo01638.1 vs. NCBI nr
Match: gi|731311947|ref|XP_010671911.1| (PREDICTED: bifunctional protein FolD 4, chloroplastic-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 611.3 bits (1575), Expect = 1.100e-171 Identity = 319/369 (86.45%), Postives = 337/369 (91.33%), Query Frame = 1
BLAST of Spo01638.1 vs. NCBI nr
Match: gi|645253889|ref|XP_008232785.1| (PREDICTED: bifunctional protein FolD 4, chloroplastic isoform X1 [Prunus mume]) HSP 1 Score: 540.4 bits (1391), Expect = 2.400e-150 Identity = 286/369 (77.51%), Postives = 317/369 (85.91%), Query Frame = 1
BLAST of Spo01638.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R8C6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_101840 PE=3 SV=1) HSP 1 Score: 703.4 bits (1814), Expect = 1.500e-199 Identity = 364/369 (98.64%), Postives = 365/369 (98.92%), Query Frame = 1
BLAST of Spo01638.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPJ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_161080 PE=3 SV=1) HSP 1 Score: 693.3 bits (1788), Expect = 1.600e-196 Identity = 358/369 (97.02%), Postives = 361/369 (97.83%), Query Frame = 1
BLAST of Spo01638.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QMZ3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_161080 PE=3 SV=1) HSP 1 Score: 681.8 bits (1758), Expect = 4.700e-193 Identity = 354/369 (95.93%), Postives = 357/369 (96.75%), Query Frame = 1
BLAST of Spo01638.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D378_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g005850 PE=3 SV=1) HSP 1 Score: 611.3 bits (1575), Expect = 7.800e-172 Identity = 319/369 (86.45%), Postives = 337/369 (91.33%), Query Frame = 1
BLAST of Spo01638.1 vs. UniProtKB/TrEMBL
Match: M5X1L5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007647mg PE=3 SV=1) HSP 1 Score: 540.0 bits (1390), Expect = 2.200e-150 Identity = 285/369 (77.24%), Postives = 317/369 (85.91%), Query Frame = 1
BLAST of Spo01638.1 vs. ExPASy Swiss-Prot
Match: FOLD4_ARATH (Bifunctional protein FolD 4, chloroplastic OS=Arabidopsis thaliana GN=FOLD4 PE=1 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 4.400e-144 Identity = 268/369 (72.63%), Postives = 310/369 (84.01%), Query Frame = 1
BLAST of Spo01638.1 vs. ExPASy Swiss-Prot
Match: FOLD1_ARATH (Bifunctional protein FolD 1, mitochondrial OS=Arabidopsis thaliana GN=FOLD1 PE=2 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 4.200e-110 Identity = 193/292 (66.10%), Postives = 235/292 (80.48%), Query Frame = 1
BLAST of Spo01638.1 vs. ExPASy Swiss-Prot
Match: FOLD3_ARATH (Bifunctional protein FolD 3, chloroplastic OS=Arabidopsis thaliana GN=FOLD3 PE=3 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 2.700e-109 Identity = 212/364 (58.24%), Postives = 264/364 (72.53%), Query Frame = 1
BLAST of Spo01638.1 vs. ExPASy Swiss-Prot
Match: FOLD2_ARATH (Bifunctional protein FolD 2 OS=Arabidopsis thaliana GN=FOLD2 PE=2 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 4.300e-107 Identity = 185/293 (63.14%), Postives = 235/293 (80.20%), Query Frame = 1
BLAST of Spo01638.1 vs. ExPASy Swiss-Prot
Match: FOLD_MAGMM (Bifunctional protein FolD OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) GN=folD PE=3 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.900e-83 Identity = 162/290 (55.86%), Postives = 205/290 (70.69%), Query Frame = 1
BLAST of Spo01638.1 vs. TAIR (Arabidopsis)
Match: AT4G00620.1 (Amino acid dehydrogenase family protein) HSP 1 Score: 512.3 bits (1318), Expect = 2.500e-145 Identity = 268/369 (72.63%), Postives = 310/369 (84.01%), Query Frame = 1
BLAST of Spo01638.1 vs. TAIR (Arabidopsis)
Match: AT2G38660.1 (Amino acid dehydrogenase family protein) HSP 1 Score: 399.4 bits (1025), Expect = 2.300e-111 Identity = 193/292 (66.10%), Postives = 235/292 (80.48%), Query Frame = 1
BLAST of Spo01638.1 vs. TAIR (Arabidopsis)
Match: AT4G00600.1 (Amino acid dehydrogenase family protein) HSP 1 Score: 396.7 bits (1018), Expect = 1.500e-110 Identity = 212/364 (58.24%), Postives = 264/364 (72.53%), Query Frame = 1
BLAST of Spo01638.1 vs. TAIR (Arabidopsis)
Match: AT3G12290.1 (Amino acid dehydrogenase family protein) HSP 1 Score: 389.4 bits (999), Expect = 2.400e-108 Identity = 185/293 (63.14%), Postives = 235/293 (80.20%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo01638.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo01638.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo01638.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo01638.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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