Spo01579 (gene)

Overview
NameSpo01579
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 50076865 .. 50082441 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGATGCTATCTGCACGCCTCCGAAGCCTTCATGCACTCCAATACTGTGCGCGCGCAATGTACTAAACAACGCTCTTTACATAAATGGAGTAGAAGAAGACTTTTCTGGGGTGCAGATACAAGTTCCATCATTCATATGTTTGATTCTTTTCTCGGTACTTTTGTAATACCAGCAACTGAGTAGGGTTGATGTTTGAGAAGCGTTTCATGTATTGGCACATTCTTTTTCTTTATAGAAGAGTAGTGAATATTGCTTAAGCCCTCAAACGGTAATAATGTCAATTACAATGAAGTGAATATTACGAAGAAGTACTGTTTTTTGTGTTGATAATGCCATCTTGGTTGATTTAGCTGTGTGTTGAGCTTTACTCATACAGAACAAAGTATTCCAAGGTCATGTGGATGTCAATCAGATACTTCGTATGATTTAATCCGATATCTGAAAATCACCTGACTCGAGTTACCACTTTACCCTAAAAAGCCACTTGAGATAGAAGAAACATAGATGATTTGACCTAAATATTATTCAGTTTACTTGTTATTAATCTGACTCAAGTTAATCGAATTGGACTCCTAATTACGTACAAAACGTATTCGCATCTTCAAAAAGCAATGGTCCACCTCCTATAAACATTAATAAAGAAAAATATCTCACTACCAAGTAGTATCAACTACTCCTAACTCTGTCAAAGTTGACCCAATCCAAAATCGACCCAAAAAATGGGTCTTAAACAAGATATTTGTGACTTGTAATCCGATTTTATCCGAACCCGTATAATCCAAAAAGTAACGGGTCACAACCTGATCAGACACATTTTGACCCGACCGATTGAAAATTATTGTATTTATAGTAATAAATGAAAATATGAGGAATTTTAATCACAATAACATATGTTGTTGTTACTATGGTTGGGTGTAACATGATTTTGTTTTTTTTTTATTATAAGCCATTTTATTATTGAATTTGACTAAATATAAACTTGTGTATGAAGCTATGTTAATTTGTGCACATACTTTGTATACAAGTGATATTACCCGTATTAATGAAAATATAATACGCGTTTTAAAATCTCTCAACATGTTAGGTCAACCCGAATCCAAAAGTTATGGGTTTTGAACAAGCATTTGTAAACTCGAACCGAAAGTCACCGACCCGAATTAAAACCCATAAGTGATTTTTTTTATAACCCGACCTGTTACTCATAATAAATATAAAGTCAATTTATTTGCAAAATCAGTTTCGATCAAAGTGATGCGAGTATTTTTGGACGAAAGGAGTATGTGCTTAAAGATGACATTGAGTCAGGGGGCAGGCACGACAAAACACGGCCTAGACACGAAAAAAAGCACGGCTTGACACGGGCAAGTAAAAAACACGGCCTGCACCGAGCACAAAGTCATGGATTGGACTCGGGGCGTGTCTTTTGGGAAAAGCACGACAAGGCAGGCACGACCCCGTCCGACGCATGTTAAATTGAGTGAAACTATGCTTAGGCACGATTCCCGACCCGATCTGTAACGTTTGGGCTTTGTGTGGGCAACACTTTTGAAAGTGTCGGCGCGGTCCGTTACAAGCGGGCTTTGTGTAGGCGGTAGGCCGAACTTGTTCAGGTCCAAGACACGTGGTTCGCCTCAAAACATGGCCCAACCCACAACCAACTCTATATGAACGTATATTAAAATTTCAAGATTGAATGATATCGTGTATTCGTGTTCAATGATTATAAGGTTTAATGTTGTGGTAATTTATATCATAACTTATTATTAATATGTTTGCAACAAAAAGTATCTATACTAATATATTAAAAGGCATTGAGAATAAAGTTTATATGCCACGTAGGACTCTCATGTTTATGCCAGATCATCTACTCACCAAGGTTATGTGATGTTATTGACAACCAAAAATCAATACAATAATGTTCAAACACAAGGCCTCAAGTTTGGAGAATAACTCTCATTACCATCTTAACCAACCACTAATTGTTGTTTATCCATGCACATTAATTTATAAACACATGTTAACATGAAGTCTAAAACAATCAAATTTTTATGTTACCTTTTATTTCTTTTGGACTATATTGGAATAAAAATAACAACTACAGCAATACGAAAACCACGAACTAAACATGATATCATAATTCTCTTAAGCATCACCTACATGTATTTTGATCAAATATATAATAAGATGAAAAATAATCTCGAATTTTAATTATTCAAAATAGCAACAAGGCATCGCCCGAGCCACACACTAGTTATTAATTTGTAAAGAGTTTCTAAAGAATTTTACGTGACACGTGGCGTTTTGCTTACTAGTCATTCACTTTATGCGATTTTCACATACATGGAAAAAATGGGAAATATGGTTTGCATAAGGTTTGATCCCCAACCTTGTGTTTAAACAATAAATACTTTACCACTATGACATGACATGTTTCATGTTATCATTGCAAAAATAAAAATAAATAAATGCAAATGTTATTATGTAGTAACCCGGGGCATCGCCCGGGCTCAAAAACTAGTTGATTGATTATAAGGATGTCAGATTGTCATTGAAGGGTTTTTTCTAGGGAGAAGCCCGACCCATCCCCAAGTGGGGATGGAGGAAAGCCTGGTACTGGCTGATGATGATAGAATGATAGATAATGTATCTGTGTGGGTGACGGGGGGAGGATGAATTTTAGGTTGGACCTGCCCACCTCACTACTTCATCTATTGATTATGAATATCAACATTTTTTTTACTACTAACCTACATATTATAATTTTTTGTTTATTTTAATTTACTCAATTGTCCTAATCACACAACCGAATTGTCAAATATTCTAGAATAATAGAGTTTGAAATTCAAAACTCTCAAACAAAAAAATGTTGGGACTAGGGGTTGGTTTTAGGCATTGTTTCAATACCTGTATCGGTAATGGAGGGGGAAGACTATCATCCGCAAGTCCGCAACCGTTCCACCCCGCTTTGATGTCATCTCTAGAAGAATAAATTATATGGTGGAGGTTAGGTGTTAAGTGATGCGGTAAATGGTTGGACAAGTATTAGGTGGGTATAACTATCGAATTAAAGTATGTTGATGGATGAAAATAACTTTAAGTTTGACGGGGGTAATGGACGGAGATGAAAATATTTTTATCTATGTGTACCTTTTTTTGTTTTAACTGTTAATAAAGAAGCCACTAAAAGGGCAACAACAGGTCTATCATATTAATTATAAATAGAAGAATATCTTAAGATATGATTACTCTTACGTGGACCTGATCCCAATAACATTAGTGTGGACCCAAAATCATTAATTTTTTCCAGCATCCTTTTTATGTATATAAAGACTTTTATTGTTAATATAATGACTATACACCAAATTTTCTTAGATATAGTATCCATTTTTTGAATCATAGTAACCTATGTTTGAAAAGTGAATTGTGACTTAAAATGAACATTATTCAAGCACATGTATCGACGACACCACTTTGCTATTTTTTTCTCATAATAATTCTAATAAACATGCCAAAATAAATTAGGAACAAGTGGTTGAACTTCTTTTAGGAATGGTCCAAAATAAATTTAGTGTGAACCAAGTCCATTTAAGAATATTGCCTTAAGATATACTTCGTACTTCGTAGTTAGATGATATTTATATATAACTAAAGTTTAAGTTTCATGCTCATTTACTCCGTAATATTTAAATTATAAACCGTATATCACACGAATATTTTACTAGTTGTAATAAAATAATGTAATTCCGACTAGAAAAAAGATTACAGAGTTGAAAAAAATAAAAATAAAAAATTAGGAAGAGCAGCCTGAGAGAGAAGAAGAGAGAGAAAGTTACCAAAAAAAACCCTGACGACGAAAGATAAGCAGCCGATTATTGGTGGTTTTTTTGTATGTATCCTCACCTTACCTCACCTTTCTCTTCTCTTCATCCTCTCGCCGGCGTTCCGCCCTCCATTTTCTCTCTCCTCCATTTCCGCCGCCCTTTTCCTCTCTCTTCTTTGCTGCGCTGCCACCACCTCCTCTGTATTCTCCGGCAGGTATCAACCATTTCGCCCGTCTCTATATTTATCGTACTTTATGTTGTTTATTTCATTCTTTTTATTGATTTGGTTATTATGTTATTTGAATTTGATTTGTTGTATTTTGTGGTCGAATTGTTTTAATTTTGTGTAAATTGTAATGTCAGGTATTGTTTTAGTGCTTGATTGATTTTTAATTTATCAATTTTAGATTTTGATGTTCATTTCTTTTTAGGTTTGATGAAAAATGGCTTGTTTACATGTACATACTATAGTTTGCAATCCTTTAGGTTAATCTTTATTGATTGAAGTTGATCTTGTATTTTGAAACTTTGAAACTATTTAATTTATGTCAAATCTTTTACTATGAGTTATTTGTATCAGTTTATTGAATTAGATTCTATGTTATGATTGATTTCCCTCCCTGTATTATCATTGTTGTCATTAATATTTTATTATTTTTATTTTGAGTCCCCAAAATTAGTTCTTTAGGTTAATTTCTTTTCTTGTCAACACAGTTTTGCCATATAATGTGAAAACAAACGAAATTTATTGTGATTGTACCAATCATCCTAATTCTTGGAACCACAGATATGTCTACTCTGGCTGACCGAAATGGGTGTTTGTGATGCAACGAAACCAGTTTTAAAACTGAACTGGGACACATTCCTTATATAACTGGGCACGTGCATTCGACCAGTAAATAGTGTCGAGAGAAGTGATTGATGATTTGGTTTGTTATGTTCTCGAGAAGGGAATGCGATTTATCACATGTTTAGGGAGTAAACAGAATTGTTTCATTAGCTATGATTTAGAATTGTGAGACAGAGATAACTCTGAACTTATTTCTGAATCTATAGTCAAAATCATGAACCCAGACATTATTCTGGTTTTCGATTCTGAACAGAGAAATTAGTCTGAAATTATCAGCTGACCCACCACTTATCGTCTAGTTTGCTTGCGCACACAACCTGGCATGAATAAACATGACTTAAAAACCTTGCTTGAAGGCCTTGAACCTTCACAAAAATTAAGTTTTTGTTTTAACACAACATTGGGACCTGACGAGTCACGCTAAATATTTGAAAATGGATTGGTTTGAAGATCAACCCATGCAAACCGGAAGCTGTCCACCACAACTATCCATTTTTGACAGGTCTACTTGCATAGCTTGCTGTGCTGTTTGCATTTAATGCTGACGTTATGTGTTTTTTCTAACTTTTCATCTTGAAACTTAATTGCAGTTTGTTGTTGTTTAACTTTTAATGGTGTAGTGGATGGATATTGTGCACCCATATTGTTATGTAGGTTTTTGTGTATCCCTTCTAAAGCTGTAGTGATGTTTGTCATTTTTCCTTTCTTTTTATATAATAGGTTGTTTGATATTCTGACTCGGAACTGTGTCATTTAATATTTTACAGCAGTATCGTTCAGACTACCCCAGTTGAGCTGTCTGCATATTCCCTGTGATTGGGAACATTGGATTTTTTTTGCGGTTATTGTCTTTCAGAGGAAAGAAATTTATTTACCAATTTCAAAGTTAAGTTGGAAGTGA

mRNA sequence

ATGGGCGATGCTATCTGCACGCCTCCGAAGCCTTCATGCACTCCAATACTGTGCGCGCGCAATGTACTAAACAACGCTCTTTACATAAATGGAGTAGAAGAAGACTTTTCTGGGGTGCAGATACAAGTTCCATCATTCATATGTTTGATTCTTTTCTCGATAAGCAGCCGATTATTGGTGGTTTTTTTGTATGTATCCTCACCTTACCTCACCTTTCTCTTCTCTTCATCCTCTCGCCGGCGTTCCGCCCTCCATTTTCTCTCTCCTCCATTTCCGCCGCCCTTTTCCTCTCTCTTCTTTGCTGCGCTGCCACCACCTCCTCTGTATTCTCCGGCAGCAGTATCGTTCAGACTACCCCAGTTGAGCTGTCTGCATATTCCCTGTGATTGGGAACATTGGATTTTTTTTGCGGTTATTGTCTTTCAGAGGAAAGAAATTTATTTACCAATTTCAAAGTTAAGTTGGAAGTGA

Coding sequence (CDS)

ATGGGCGATGCTATCTGCACGCCTCCGAAGCCTTCATGCACTCCAATACTGTGCGCGCGCAATGTACTAAACAACGCTCTTTACATAAATGGAGTAGAAGAAGACTTTTCTGGGGTGCAGATACAAGTTCCATCATTCATATGTTTGATTCTTTTCTCGATAAGCAGCCGATTATTGGTGGTTTTTTTGTATGTATCCTCACCTTACCTCACCTTTCTCTTCTCTTCATCCTCTCGCCGGCGTTCCGCCCTCCATTTTCTCTCTCCTCCATTTCCGCCGCCCTTTTCCTCTCTCTTCTTTGCTGCGCTGCCACCACCTCCTCTGTATTCTCCGGCAGCAGTATCGTTCAGACTACCCCAGTTGAGCTGTCTGCATATTCCCTGTGATTGGGAACATTGGATTTTTTTTGCGGTTATTGTCTTTCAGAGGAAAGAAATTTATTTACCAATTTCAAAGTTAAGTTGGAAGTGA

Protein sequence

MGDAICTPPKPSCTPILCARNVLNNALYINGVEEDFSGVQIQVPSFICLILFSISSRLLVVFLYVSSPYLTFLFSSSSRRRSALHFLSPPFPPPFSSLFFAALPPPPLYSPAAVSFRLPQLSCLHIPCDWEHWIFFAVIVFQRKEIYLPISKLSWK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo01579.1Spo01579.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo01579.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01579.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01579.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01579.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016049 cell growth
biological_process GO:0007030 Golgi organization
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0006606 protein import into nucleus
biological_process GO:0042545 cell wall modification
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0006508 proteolysis
biological_process GO:0080167 response to karrikin
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0007033 vacuole organization
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0000902 cell morphogenesis
cellular_component GO:0005634 nucleus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0016020 membrane
cellular_component GO:0005576 extracellular region
cellular_component GO:0005739 mitochondrion
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0016740 transferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo130290.79Barchart | Table
Spo248570.78Barchart | Table
Spo146780.74Barchart | Table
Spo054310.74Barchart | Table
Spo022780.74Barchart | Table
Spo280580.74Barchart | Table
Spo171610.73Barchart | Table
Spo188280.73Barchart | Table
Spo270810.72Barchart | Table
Spo012610.72Barchart | Table
Spo120290.71Barchart | Table
Spo185020.71Barchart | Table
Spo217680.70Barchart | Table
Spo236520.70Barchart | Table
Spo026430.70Barchart | Table
Spo260450.70Barchart | Table
Spo074760.70Barchart | Table
Spo143420.70Barchart | Table
Spo205440.69Barchart | Table
Spo166520.69Barchart | Table
Spo205210.69Barchart | Table
Spo271020.69Barchart | Table
Spo092900.69Barchart | Table
Spo132020.69Barchart | Table
Spo218020.69Barchart | Table
Spo119020.68Barchart | Table
Spo259180.68Barchart | Table
Spo001140.68Barchart | Table
Spo208690.68Barchart | Table
Spo069490.67Barchart | Table
Spo002250.67Barchart | Table
Spo012040.67Barchart | Table
Spo069190.67Barchart | Table
Spo117330.67Barchart | Table
Spo132140.67Barchart | Table
Spo197510.67Barchart | Table
Spo206860.67Barchart | Table
Spo247960.67Barchart | Table
Spo200710.66Barchart | Table
Spo139410.66Barchart | Table
Spo128940.66Barchart | Table
Spo239070.66Barchart | Table
Spo020850.66Barchart | Table
Spo049080.66Barchart | Table
Spo197880.66Barchart | Table
Spo172500.66Barchart | Table
Spo158810.65Barchart | Table
Spo025130.65Barchart | Table
Spo156390.65Barchart | Table
Spo036540.65Barchart | Table
Spo134900.65Barchart | Table
Spo122490.65Barchart | Table
Spo110980.65Barchart | Table