Spo01331 (gene)

Overview
NameSpo01331
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 15650918 .. 15653548 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTTCGTGACGAAATTGACATGAACAAGCTTCAAAATCCACCGAAAAGCAAAAAGTAAGTAATTACAATTGATTCTGATGTTTCGATTTTATTTTCGAACTAAAATGAAATCTAATTTTGCTTATTTTCGTTCTATTTCAGAAAAACGAAGATGCCGAAAGAAAAAAAGAAAACGTATGTAATTTAATTTCAGATTTCGAACATGCAACTGTTTTATTACTTAAATATTTGTTTAATTCAGTTATTTTCAGTATTTTTCTTTATAATGTTCAAATAATTTCATTATAATGGTCAATTTTTTGGTTTATGATGTTAGCAAACCCTAACTTCTGATTTTTTGGCTATAGGACTGGAAGATCTAGTGAAGAGCAAAAAATCGGGAATGCAAAGCAACCAGACATGAAGGAGTAAGTTATTTTAAGTTTTCGTAGATAAATTCATTTTAATTTACATATGTTCAATCAATTTTATGTTAATGTTCAATCGTTTTTAATTTAATGTTCATTTTCGTTGCGTGATGATTTAACCAAACCCTAACTATTGGTTTTTTGATCACAGAACTGGAAAATACGAAATTGAGAAGGAAATTGAAGCTGAAAAGCAAATAGACACATTCCAGTAAGTAATTTTTATGTTTTTGAATATCTATTTCTATTTAATTTGCGAATGTGCCGTTTTTGACATTTGATACAATACAAATACAAATTAATGATACATTGTTCATATTCATAGAGATTTAACAATAATCTTATTGATGATTAAAATTTGGATTGGGAATGTCAATTAATTTAAATATTATTATAATAATGTAAATGTGATGAACTTTTGTTGAGTTTTTCTAATCTTATGTTAGATGTTCAATTTATGTGTAAAATGTTCATATTGTTTAAGCTAGATATTCATTTTGGTCCACTGAGTTTTGTTCATTCCTCTGTAAAATAAATTAAGTCTTGAGAACTCATGATAACTATCTTATGCAAAATGTTCAATTGATTATAGCAGAATATTCAATATCTTTTTGGAAAATGATCATATATTCCAAACTGGATATCCTTTTTGGTCTACTGAGATTTTCTTTAGGAATACTGAATTATTTCGAATGTTATATATATAATTGAAATGATTTGAACATTTGTTCATTCATATGTCCAAAAACTAAATCCAGAAATCATGGTAACTGTCTGTCTCCAAAATGTTCAATATATTTTGATAAAATATTCATTTTCTTTTTATAAAATATTCAATATATTTTGATAGTTCATTTTCTTTTTATAAAATGTTCAATTTTTTTTTCTGGAATATATTTTGTTACAGAGTTTTGTTTTGGAATATACTATGAATTATTTCTAGTATTATATTCATAATGGAAATGTTCTTTGTACTAATATTCAATTTTTCTACAGTAAAATTTTAAATCTACACTCATCTGCGAAAAATGTTCAATTTATTTTGCTAAAATATTCAATTCTTTTTAATAAAATGTTCGTTTACTCTGATATACTAAGTTTGGTTTAGAAATCTTCAATTATTTCAACTACTATATTCATAATTTCAATGTTTGAACTTTTGTTCATTTCTTCAGTCCTTTTTATTATTAAAACTCATGATAACTGTTTTTATGTTAAATGTTCATTTTGTTTTCATAAAATATTCATTTCTTCAAACTGAATTTTGCTCTGGACACTCATTAGTTATACATTTATAAAATCTAGAGAACAACCACAAAGGTTAATACTCAAATTTAAGCGAAGACCAACTAAATCCCAGCCAGAGGTTCAGAAAGTATTAAGGTATAAGATAATATCATTTTTTTATTAAATTTGAATGATTTTTAATATTATATAATATAATGTGTGCATTAACATCATATTAATAAAAAATACAGTGAAGGAGATGGGAAGGCATGTACAACTTCTGAGACAGAAGTTCAAAAACCATTGAGGTATAATATAATGTCCATTTTTTTACTACATTATGCATGTAATATAAATGTTCTTTTTCTTAAAGTTATTTGTTCAATTGTGTATGGCTTAATATTCATTCATAAATTGAAAGTTTATCTCATCTGCGTTTATGAATTATGTTCAAAAAATTTCCTCCTTGTGTTCAAAGTTTTTATGAATTATGATCAAAAAATTTACTTATTATGTTTAAAGCTTCTCCTATATGTTCAAAGCTTTTCTCCATTGTTCGTTCAAATTTTTTAACCTTTATGTTCAAAGTTTTTAGTCATATGTTCAAAGCCTTTCTTTCTGTTTATATCTCAGTCAAACTATTTGGTTATATGTTCAAAGCTTTTCTCCATTTTGTTCAAAGTTTTTAACCTTTATGTTCAAAGTTTTTAGTCAAATGTTCAAATTTACCTATTATGTTTAAAACTTTTCTCCATTTTGTTCAAAGTTTATTACCTTTATGTTCAAAGTTTTTACCCTAATGTTCAAGTTTTTAGTCATGGGTTCAAATTTCACAGTATAATATAATGTCCATTTTTAGCTTTTTAAATAATTTTTTATTAATTTTATATAAAATGACTTGTACGTTTACACCTTACTATTCAAATTACAGTGAAAGAGATAAGAAATCTTCATCAAAATCACAGCCTGAAGTTCAAAAAACATCAAGGTAA

mRNA sequence

ATGGATGTTCGTGACGAAATTGACATGAACAAGCTTCAAAATCCACCGAAAAGCAAAAAAAAAACGAAGATGCCGAAAGAAAAAAAGAAAACGACTGGAAGATCTAGTGAAGAGCAAAAAATCGGGAATGCAAAGCAACCAGACATGAAGGAAACTGGAAAATACGAAATTGAGAAGGAAATTGAAGCTGAAAAGCAAATAGACACATTCCAAGAACAACCACAAAGGTTAATACTCAAATTTAAGCGAAGACCAACTAAATCCCAGCCAGAGGTTCAGAAAGTATTAAGTGAAGGAGATGGGAAGGCATGTACAACTTCTGAGACAGAAGTTCAAAAACCATTGAGTGAAAGAGATAAGAAATCTTCATCAAAATCACAGCCTGAAGTTCAAAAAACATCAAGGTAA

Coding sequence (CDS)

ATGGATGTTCGTGACGAAATTGACATGAACAAGCTTCAAAATCCACCGAAAAGCAAAAAAAAAACGAAGATGCCGAAAGAAAAAAAGAAAACGACTGGAAGATCTAGTGAAGAGCAAAAAATCGGGAATGCAAAGCAACCAGACATGAAGGAAACTGGAAAATACGAAATTGAGAAGGAAATTGAAGCTGAAAAGCAAATAGACACATTCCAAGAACAACCACAAAGGTTAATACTCAAATTTAAGCGAAGACCAACTAAATCCCAGCCAGAGGTTCAGAAAGTATTAAGTGAAGGAGATGGGAAGGCATGTACAACTTCTGAGACAGAAGTTCAAAAACCATTGAGTGAAAGAGATAAGAAATCTTCATCAAAATCACAGCCTGAAGTTCAAAAAACATCAAGGTAA

Protein sequence

MDVRDEIDMNKLQNPPKSKKKTKMPKEKKKTTGRSSEEQKIGNAKQPDMKETGKYEIEKEIEAEKQIDTFQEQPQRLILKFKRRPTKSQPEVQKVLSEGDGKACTTSETEVQKPLSERDKKSSSKSQPEVQKTSR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo01331.1Spo01331.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo01331.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01331.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01331.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01331.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0098655 cation transmembrane transport
biological_process GO:0006449 regulation of translational termination
biological_process GO:0043488 regulation of mRNA stability
biological_process GO:0051083 'de novo' cotranslational protein folding
biological_process GO:0006457 protein folding
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0009408 response to heat
biological_process GO:0008152 metabolic process
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0006364 rRNA processing
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0042793 plastid transcription
cellular_component GO:0009508 plastid chromosome
cellular_component GO:0009507 chloroplast
cellular_component GO:0016020 membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005840 ribosome
cellular_component GO:0018444 translation release factor complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016887 ATPase activity
molecular_function GO:0003747 translation release factor activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008324 cation transmembrane transporter activity
molecular_function GO:0005515 protein binding
molecular_function GO:0051082 unfolded protein binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo036110.81Barchart | Table
Spo164820.75Barchart | Table
Spo168730.74Barchart | Table
Spo154140.74Barchart | Table
Spo163210.71Barchart | Table
Spo111800.71Barchart | Table
Spo197760.71Barchart | Table
Spo052300.71Barchart | Table
Spo165680.71Barchart | Table
Spo094930.70Barchart | Table
Spo245030.70Barchart | Table
Spo261950.70Barchart | Table
Spo212890.70Barchart | Table
Spo092330.70Barchart | Table
Spo208890.69Barchart | Table
Spo268500.69Barchart | Table
Spo185240.69Barchart | Table
Spo188400.69Barchart | Table
Spo068290.69Barchart | Table
Spo137800.69Barchart | Table
Spo271590.68Barchart | Table
Spo009040.68Barchart | Table
Spo013140.68Barchart | Table
Spo039140.68Barchart | Table
Spo048510.68Barchart | Table
Spo121430.68Barchart | Table
Spo168840.68Barchart | Table
Spo218110.68Barchart | Table
Spo224750.68Barchart | Table
Spo225680.68Barchart | Table
Spo231270.68Barchart | Table
Spo244400.68Barchart | Table
Spo269780.68Barchart | Table
Spo195000.67Barchart | Table
Spo001290.67Barchart | Table
Spo013840.67Barchart | Table
Spo268510.67Barchart | Table
Spo105860.67Barchart | Table
Spo002630.67Barchart | Table
Spo267270.67Barchart | Table
Spo239780.67Barchart | Table
Spo173050.67Barchart | Table
Spo184790.67Barchart | Table
Spo083350.67Barchart | Table
Spo064550.67Barchart | Table
Spo087650.67Barchart | Table
Spo191950.67Barchart | Table
Spo148330.66Barchart | Table
Spo063000.66Barchart | Table
Spo037390.66Barchart | Table
Spo030570.66Barchart | Table
Spo030270.66Barchart | Table
Spo189070.66Barchart | Table
Spo214740.66Barchart | Table
Spo225250.66Barchart | Table
Spo227120.66Barchart | Table
Spo269790.66Barchart | Table
Spo006800.66Barchart | Table
Spo088790.66Barchart | Table
Spo251560.66Barchart | Table
Spo133550.66Barchart | Table
Spo135090.66Barchart | Table
Spo133870.65Barchart | Table
Spo216190.65Barchart | Table
Spo099230.65Barchart | Table
Spo011140.65Barchart | Table
Spo154810.65Barchart | Table
Spo018310.65Barchart | Table
Spo006370.65Barchart | Table
Spo243880.65Barchart | Table
Spo085330.65Barchart | Table