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Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAATTGGAGTGATACAAGTATTAGGTTTTCGTTTGTTTAGGGTTTAGGGTTTTGCTCATAATTCTACACGGTTTAGGGTTTTGCAGACGCTCTTCATCAGTCGAGAAGCTCAGTAGAGAGAGAACACACCAATATTTCCCCGCCGTCAAAGAAGAAGAGCGTTCTTCATCAGTCGAGAAGCTCAAGCAAGCGAAAATGGCGAAGATAAACTACAAGAAACTTCAAGGCAGCCAAAACCTAAGGCTACGTCTTCTTCTCTCAACACTCTCCTCAACTCCAATTCTCATCGTCGACATTCGATCAAATGAAACAATCCCCGGCCTTCTTCCTCACGAAATCTCTCTCCTACGACTCATCGAAAAAGTCTGCGATGATTGTCATGTTGAAATTAATGAAACTGGTATGTTCAATTTTTCAATAAATGGGGTTTAGGGTTTTTCTAGGGTTTAAGGATTCTTATTGTTTTTGTTATTTATTTTTTATTAATCGTTGATTGCAGGTACGAAATTGAAGTACAAGCCTGGTATTGTGATGGGTGGAAAGTATTTGGTTCATGATTGTGGGTTGAGTCGTTCAATTGGTTATTTCTTGGAACCACTTGTGGTTTTAGGTTTGTTTGGGAAGAAGCCTCTTTCAATTAGGCTCAAAGGTACTGCATTTATTGTGTTTGATTTATGTTTGATTAGTGTTCTCACCTTGTGTTTTTCGTTTCGATTTCGGTTGTTTTAGAGGAGTTAAGCTAAAGGTTGGGGTCCAACCTTTTGGTTTTTTCACCCTTTAGGACCTCAACCTTTTTTTTTCACCTTTTGGGGACTCATATTCATTTTTCGGCCAGTTAACCATAGTTTAACTCACCGTTAACCATACTATCACTCAAATAATAAATTAAGACAAAGGTTAGGGTCCAACTTTTTGATTTTTTCACCGTTTAGGACCCGAATATTTTTTTTCACCTTTTGGGACCTCATATCCATATTTTGTATACCAACGTTATTTACTATAAAAAAAATCAGAAAATGCCAAAAAAAAAAAAAAAAGTTAGCGCTCAAATTAATAATTATAATAATAGTTATTAATATTTTTATTTTTATTAATTATTATGTAATAATTGTTATTAATATATTTAACAATAATAATAATAATTCATCTTTTCCAAACCCCATCATACAATTAAAACTACATAGTACTCTTCTCCAAACATCATAGATAATCTTTACTCATTCATAAGACCTTTAATAGTTGAAACTTAATTTACGTAATCCAATAACAACTTATTTAAATATGTTTATAGAAAATTTGAGGTCGTAAATTTTAATTCGGAGATTGCTGATTAATTTTGATCGAGTTAAGCATAAATCATTTAAGTACCTCATCAAATATGAGCATAAATAAACCAATTGTCTTTACTGTCATAAAACAATCAAGAACTAGTATGATATATTAACTTGTGATCAAAATCAAAATTCGTTTAAAATTAACCTATTTTTATTAATTTTACGTTTTTGTGTGGACATTATTAATATTCTTCAAACAAACCACAAACAATTGTGAGGATATACCATCAATGACAGATCTTCCTAACAACTTGGGTCCCGGGCGGAAAATTCCGTAGTGTATTTTTAGTTCCACCATCCCCGTAAACCTTTGAGTATAATTGTATGAATATCGTACTCTACTATATAAATTGCTTAATTCTTCTATTGTCATTGGACACCATAACCGAATGTATAAAATATGATCAGCTTGTAAATAATTATTTGCTTCTTTATTCATTAAATTATTTGATACCCAAATCAGTTTATATATGGGCTAAGTTTATGAATTACGTTACATATTATTTTAATTTGAGCTTATTGTATGTTAATGGTTAGAAACTTTAATAATTGAACTGGAATTACATGAAAACTTGAATGAGGTCTCAAAAGGTGAAAAAAGAAAGTTCAGGTCCTGAAATGTGAAAAAACGAAAAGGTTAGTCCTCAAACTTTTGATTTACTTTAACCTTTTAACCCAAGGACCTAACCTTTTAATGACTCTAGTTAATTTTGGCCGGAAAAGGGGAATGAGGTCCCAAACGGTGAAAAAAAAAGGTATAGGTCCTAAACGGTGAAAAGTTCAAAAGGTTAGACCCCATTTATTAGCTTAACTCTGTTTTAGAGGTTGGAACTTGTATGCCACTTGCACATGCCACCCTTTGTTTTTCTTACTGGAATTCTGGTGCAGTTTTGGAGTTCTGTTTTTATTGTTACTGGAAAATGTGTGGTTTAACTTGTTGGACATTCATGCTTAACTTTTTATTGGTTAAACTTTAGTACGTTGTTTTTGGTAATTAACTAATGATGTTACCCTGTTAATCTGTTACACACTTGATTGCCTTAAATTCTACAGTATTACTCAATAAATACAGTACTATGATAATGAAAAAGCTCTTCTTAGTGAATTAGTCCGCAGTTATTGGAACTAGTAGGAAATTTTGTTGATGGTGTATTAGAATACTGGAAGCTGTCTGCAATGGATTCACCTCTTTTGATATTGAAACACAGAGAATAGAAGGGAATTACGAAGAAGAATTTAGGGAAGGTGCTTTTTAGCTAATTAGGATAATTGAAACATACCCAAAATAAACTATAGGTGTAATAAACATTAAATTGAAGCACTAAATAATCTACCCACCTTTGTTGAGGAAGACAGTTCATGCATGCTTCTTTACCTGAACTGGCTGTTAGCATCTGTTCCTTTCTGATTCTTTCTCGTAACTTGGAAGTTTTCTTAGCGCTGTACAAACTTTCATTTCAAAGTTGATGCTAAGGTCTTAGAATTCAAGTGACTTAAGTTATTTTCTCACCAGGTATAACCAACGATTCTAAGGATCCATCCATTGATACCTTCCGGTCAACTACCTTGAACATTTTGAAACGCTTTGGAGTTCCTTCAGAAGGTCTGGAGCTGAAAATTGAGAACCGTGGAGTACCCCCTCTGGGTGGTGGAGAAGTAGTTTTGTCAGTACCAATTGTGCATACTAGTTTAACGGTAAGTCTTTTTTAGCCTTTTTATTTACTTGAGTCATACTTCCATGTCTTATATATCTCCATTCAGGCAGTGAACTGGATTGATGAGGGAATGGTTAAACGCATCAGAGGGGTGTCTTTTTCTACTCGAGTATCGGCTCAGTTTGAAAATGCAATTATACATGCTGCTCGTGGGATTTTCAATCGTTTGCTTCCTGATGTCCATATCTTCACCGATCACAAGGCTGGTGCACAAGCTGGAAAGTAAGCTTCTGCTTCTTTTTGCCTATAATTTCTCCCTTAACCCGAAAGTGCATGCATGTCTCCGGCATGAGGTTATGGATATCATGAGAAAGTACACTTCCCCACCAGAGTATTACTCTCGTTTGGTTGTTTTTTGAAATGGTTAAATTGACTACAGGTTGAGAAAGTAGTGCTTTGTGTAATAGTCCCTAGTGTCCTGTTTGGTATTGCTACTATTGATGTTACCCCGTACCCCTGTCTTTTGAGTTATGGTGATTTATTTTGTATGGATGTCTGATTCTGATTCAGTTCCCCCGGCTTTGGTATTTCACTGGTCGCTGAAACCACTTCTGGATGCTACATCTCTGTTGATACTACTATTTCTTATCCACGAAAAGAGGAGACAGCTGAGATTGAAGACGATGAGAGGGCAGATCTGAAGCCACCTGCGGATGTTGGTGTGGAAATTGCTTCTGCTTTACTTGGTGAAATTGAGCAGGGGGGAGTGGTGGACTCCACACATCAGGTTTGTGCTATCAACAATCATAGATACTTGTGTGTCAAGTGGGTTCAAATGCTTATATTGATTTTACACATTATTTTCTGTTACCATATTTTAGTAAAAGCTACTTCCACGCCAACATCTTGACTATATTTTTATATTAACAAATACTCCTGACTGGTTTTAAATATTTTTGAGCTAGGGTATTTTTAAATTATTGTTTTAATAGATTACTTTGACAGCTTGATGAATAAACTTAGTATTGGCCGCCAAAGATTAAAGTGGCTTCTTATTTTTATAATAGTATACTTCGTAAGAAAAAATGCTGCGTTGTACTTACTTGAAGTTTGAACGCCATAGAACTTGTTTTTAGGCGAGTTTGTTTTGAGACAAATGAATTGCAATCTAATTAGACCTGAATCAATAGTGATAATAGATCTTTATAATCCTTTAGCATGGTAATGGTGGTTGCTCTATCGTTCAGTGTGAGAAATGAAACTGCATTTGGTTTGTCCATTTTGACTCCTCCATTTGAATTTGCAATAAAAAAAACCTTTCTGATAGCAGATTAATACTAAAGATCCCCATGCTGGTTCTGTTTTCTTTTATTTGTTGAAGATAACCTCAACTTTCTCTTCTAAGTTGGACATATTTTTTGAAGGCAAAAGTATTTGATATGTTTTGGCTGAGTAGTACTTCCTGACATAGTAATGTGATTAAAAAAAACAATTCGAAATAGCGAACGTGTCTTCTATATTTTTGTTATAGGTGTAGGATTTTCTTGAATTGATATTAGTTGCACAGTATAAGTGAATTAAGAAACTATCTTTGCTTGTTTAGGAGTTAGAGAATTCAGTTTTTTTGCCTTCTAAAATCCTATTCCACCAAGTCACTAACTACACCATTTTCTTTATATTTACTGGTTTTGCAGGGGTTGTTATATCTTCTTTGTGCTTTATGCCCTCAAGATGTATCTAAAATCCGTGTAGGAAAACTTTCTCCCTATGGAATAGAAGCATTGAGGCTGATAAAAGAGTTTCTGAGTGTTACATTTGCCATCAAACCTGATCCTTCAACAGGCACGGTCATACTTAAATGTGTGGGATGTGGTTTGAAAAATCTCTCCAGAAAGCTTTCATGAATGGAAAATTGGAGGTTTTGCAGACGCTCTTCATCAGTCGAGAAGCTCAGTAGAGAGAGAACACACCAATATTTCCCCGCCGTCAAAGAAGAAGAGCGTTCTTCATCAGTCGAGAAGCTCAAGCAAGCGAAAATGGCGAAGATAAACTACAAGAAACTTCAAGGCAGCCAAAACCTAAGGCTACGTCTTCTTCTCTCAACACTCTCCTCAACTCCAATTCTCATCGTCGACATTCGATCAAATGAAACAATCCCCGGCCTTCTTCCTCACGAAATCTCTCTCCTACGACTCATCGAAAAAGTCTGCGATGATTGTCATGTTGAAATTAATGAAACTGGTACGAAATTGAAGTACAAGCCTGGTATTGTGATGGGTGGAAAGTATTTGGTTCATGATTGTGGGTTGAGTCGTTCAATTGGTTATTTCTTGGAACCACTTGTGGTTTTAGGTTTGTTTGGGAAGAAGCCTCTTTCAATTAGGCTCAAAGGTATAACCAACGATTCTAAGGATCCATCCATTGATACCTTCCGGTCAACTACCTTGAACATTTTGAAACGCTTTGGAGTTCCTTCAGAAGGTCTGGAGCTGAAAATTGAGAACCGTGGAGTACCCCCTCTGGGTGGTGGAGAAGTAGTTTTGTCAGTACCAATTGTGCATACTAGTTTAACGGCAGTGAACTGGATTGATGAGGGAATGGTTAAACGCATCAGAGGGGTGTCTTTTTCTACTCGAGTATCGGCTCAGTTTGAAAATGCAATTATACATGCTGCTCGTGGGATTTTCAATCGTTTGCTTCCTGATGTCCATATCTTCACCGATCACAAGGCTGGTGCACAAGCTGGAAATTCCCCCGGCTTTGGTATTTCACTGGTCGCTGAAACCACTTCTGGATGCTACATCTCTGTTGATACTACTATTTCTTATCCACGAAAAGAGGAGACAGCTGAGATTGAAGACGATGAGAGGGCAGATCTGAAGCCACCTGCGGATGTTGGTGTGGAAATTGCTTCTGCTTTACTTGGTGAAATTGAGCAGGGGGGAGTGGTGGACTCCACACATCAGGGGTTGTTATATCTTCTTTGTGCTTTATGCCCTCAAGATGTATCTAAAATCCGTGTAGGAAAACTTTCTCCCTATGGAATAGAAGCATTGAGGCTGATAAAAGAGTTTCTGAGTGTTACATTTGCCATCAAACCTGATCCTTCAACAGGCACGGTCATACTTAAATGTGTGGGATGTGGTTTGAAAAATCTCTCCAGAAAGCTTTCATGA ATGGAAAATTGGAGGTTTTGCAGACGCTCTTCATCAGTCGAGAAGCTCAGTAGAGAGAGAACACACCAATATTTCCCCGCCGTCAAAGAAGAAGAGCGTTCTTCATCAGTCGAGAAGCTCAAGCAAGCGAAAATGGCGAAGATAAACTACAAGAAACTTCAAGGCAGCCAAAACCTAAGGCTACGTCTTCTTCTCTCAACACTCTCCTCAACTCCAATTCTCATCGTCGACATTCGATCAAATGAAACAATCCCCGGCCTTCTTCCTCACGAAATCTCTCTCCTACGACTCATCGAAAAAGTCTGCGATGATTGTCATGTTGAAATTAATGAAACTGGTACGAAATTGAAGTACAAGCCTGGTATTGTGATGGGTGGAAAGTATTTGGTTCATGATTGTGGGTTGAGTCGTTCAATTGGTTATTTCTTGGAACCACTTGTGGTTTTAGGTTTGTTTGGGAAGAAGCCTCTTTCAATTAGGCTCAAAGGTATAACCAACGATTCTAAGGATCCATCCATTGATACCTTCCGGTCAACTACCTTGAACATTTTGAAACGCTTTGGAGTTCCTTCAGAAGGTCTGGAGCTGAAAATTGAGAACCGTGGAGTACCCCCTCTGGGTGGTGGAGAAGTAGTTTTGTCAGTACCAATTGTGCATACTAGTTTAACGGCAGTGAACTGGATTGATGAGGGAATGGTTAAACGCATCAGAGGGGTGTCTTTTTCTACTCGAGTATCGGCTCAGTTTGAAAATGCAATTATACATGCTGCTCGTGGGATTTTCAATCGTTTGCTTCCTGATGTCCATATCTTCACCGATCACAAGGCTGGTGCACAAGCTGGAAATTCCCCCGGCTTTGGTATTTCACTGGTCGCTGAAACCACTTCTGGATGCTACATCTCTGTTGATACTACTATTTCTTATCCACGAAAAGAGGAGACAGCTGAGATTGAAGACGATGAGAGGGCAGATCTGAAGCCACCTGCGGATGTTGGTGTGGAAATTGCTTCTGCTTTACTTGGTGAAATTGAGCAGGGGGGAGTGGTGGACTCCACACATCAGGGGTTGTTATATCTTCTTTGTGCTTTATGCCCTCAAGATGTATCTAAAATCCGTGTAGGAAAACTTTCTCCCTATGGAATAGAAGCATTGAGGCTGATAAAAGAGTTTCTGAGTGTTACATTTGCCATCAAACCTGATCCTTCAACAGGCACGGTCATACTTAAATGTGTGGGATGTGGTTTGAAAAATCTCTCCAGAAAGCTTTCATGA MENWRFCRRSSSVEKLSRERTHQYFPAVKEEERSSSVEKLKQAKMAKINYKKLQGSQNLRLRLLLSTLSSTPILIVDIRSNETIPGLLPHEISLLRLIEKVCDDCHVEINETGTKLKYKPGIVMGGKYLVHDCGLSRSIGYFLEPLVVLGLFGKKPLSIRLKGITNDSKDPSIDTFRSTTLNILKRFGVPSEGLELKIENRGVPPLGGGEVVLSVPIVHTSLTAVNWIDEGMVKRIRGVSFSTRVSAQFENAIIHAARGIFNRLLPDVHIFTDHKAGAQAGNSPGFGISLVAETTSGCYISVDTTISYPRKEETAEIEDDERADLKPPADVGVEIASALLGEIEQGGVVDSTHQGLLYLLCALCPQDVSKIRVGKLSPYGIEALRLIKEFLSVTFAIKPDPSTGTVILKCVGCGLKNLSRKLS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo01167.1 vs. NCBI nr
Match: gi|902175187|gb|KNA08546.1| (hypothetical protein SOVF_161710 [Spinacia oleracea]) HSP 1 Score: 741.9 bits (1914), Expect = 6.300e-211 Identity = 379/391 (96.93%), Postives = 379/391 (96.93%), Query Frame = 1
BLAST of Spo01167.1 vs. NCBI nr
Match: gi|731333776|ref|XP_010677903.1| (PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 666.8 bits (1719), Expect = 2.600e-188 Identity = 331/379 (87.34%), Postives = 351/379 (92.61%), Query Frame = 1
BLAST of Spo01167.1 vs. NCBI nr
Match: gi|976923088|gb|KVI07436.1| (RNA 3'-terminal phosphate cyclase, partial [Cynara cardunculus var. scolymus]) HSP 1 Score: 614.0 bits (1582), Expect = 2.000e-172 Identity = 313/417 (75.06%), Postives = 352/417 (84.41%), Query Frame = 1
BLAST of Spo01167.1 vs. NCBI nr
Match: gi|747100923|ref|XP_011098569.1| (PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Sesamum indicum]) HSP 1 Score: 608.6 bits (1568), Expect = 8.300e-171 Identity = 305/379 (80.47%), Postives = 337/379 (88.92%), Query Frame = 1
BLAST of Spo01167.1 vs. NCBI nr
Match: gi|747040467|ref|XP_011082794.1| (PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Sesamum indicum]) HSP 1 Score: 606.7 bits (1563), Expect = 3.100e-170 Identity = 313/412 (75.97%), Postives = 350/412 (84.95%), Query Frame = 1
BLAST of Spo01167.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPP5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_161710 PE=4 SV=1) HSP 1 Score: 741.9 bits (1914), Expect = 4.400e-211 Identity = 379/391 (96.93%), Postives = 379/391 (96.93%), Query Frame = 1
BLAST of Spo01167.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CGR0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g110520 PE=4 SV=1) HSP 1 Score: 666.8 bits (1719), Expect = 1.800e-188 Identity = 331/379 (87.34%), Postives = 351/379 (92.61%), Query Frame = 1
BLAST of Spo01167.1 vs. UniProtKB/TrEMBL
Match: A0A103YE55_CYNCS (RNA 3'-terminal phosphate cyclase (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_014240 PE=4 SV=1) HSP 1 Score: 614.0 bits (1582), Expect = 1.400e-172 Identity = 313/417 (75.06%), Postives = 352/417 (84.41%), Query Frame = 1
BLAST of Spo01167.1 vs. UniProtKB/TrEMBL
Match: A0A068U235_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039512001 PE=4 SV=1) HSP 1 Score: 603.2 bits (1554), Expect = 2.400e-169 Identity = 297/379 (78.36%), Postives = 332/379 (87.60%), Query Frame = 1
BLAST of Spo01167.1 vs. UniProtKB/TrEMBL
Match: A0A022R2C9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008295mg PE=4 SV=1) HSP 1 Score: 602.4 bits (1552), Expect = 4.100e-169 Identity = 294/379 (77.57%), Postives = 335/379 (88.39%), Query Frame = 1
BLAST of Spo01167.1 vs. ExPASy Swiss-Prot
Match: RCL1_ARATH (Probable RNA 3'-terminal phosphate cyclase-like protein OS=Arabidopsis thaliana GN=At5g22100 PE=2 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 4.700e-150 Identity = 268/373 (71.85%), Postives = 316/373 (84.72%), Query Frame = 1
BLAST of Spo01167.1 vs. ExPASy Swiss-Prot
Match: RCL1_DICDI (Probable RNA 3'-terminal phosphate cyclase-like protein OS=Dictyostelium discoideum GN=rcl1 PE=1 SV=2) HSP 1 Score: 340.9 bits (873), Expect = 2.000e-92 Identity = 171/369 (46.34%), Postives = 246/369 (66.67%), Query Frame = 1
BLAST of Spo01167.1 vs. ExPASy Swiss-Prot
Match: RCL1_HUMAN (RNA 3'-terminal phosphate cyclase-like protein OS=Homo sapiens GN=RCL1 PE=1 SV=3) HSP 1 Score: 323.2 bits (827), Expect = 4.300e-87 Identity = 175/374 (46.79%), Postives = 233/374 (62.30%), Query Frame = 1
BLAST of Spo01167.1 vs. ExPASy Swiss-Prot
Match: RCL1_MOUSE (RNA 3'-terminal phosphate cyclase-like protein OS=Mus musculus GN=Rcl1 PE=2 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 1.300e-86 Identity = 174/374 (46.52%), Postives = 234/374 (62.57%), Query Frame = 1
BLAST of Spo01167.1 vs. ExPASy Swiss-Prot
Match: RCL1_BOVIN (RNA 3'-terminal phosphate cyclase-like protein OS=Bos taurus GN=RCL1 PE=2 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 1.300e-86 Identity = 174/374 (46.52%), Postives = 233/374 (62.30%), Query Frame = 1
BLAST of Spo01167.1 vs. TAIR (Arabidopsis)
Match: AT5G22100.1 (RNA cyclase family protein) HSP 1 Score: 532.3 bits (1370), Expect = 2.700e-151 Identity = 268/373 (71.85%), Postives = 316/373 (84.72%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo01167.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo01167.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo01167.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo01167.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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