Spo01046 (gene)

Overview
NameSpo01046
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionMitochondrial 39S ribosomal protein L53
LocationSpoScf_00678 : 312132 .. 321426 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTTTACAGACCGTGTAGAAGAATCGGAGGAAACAACGAAATGATGGGCTTCATAAGTTCATAAGTGTACTAGTAGAAATAATAGACATTCTCCGCCCCGGTACCACCATCCTCGCCTTCGCCTCTCTCCCGGCAGCAGCATCCGCCTCTAAAGTTTCAGAAATCCAGAATGTTGAAGTTCTTATCAAAGGTGAAACTAGAGTTCAATGCACTGGACTCCCGTGCAGGTGCTTGCATGGAGTTCTTAGCTCAGTGCAGTGCCGGCAAAGCCAGGGACTCAAACCCCAGTTGCCAAGTCGAAGTTAAGCGCCGCACCGACGACCATCCTCCTCAAATCAAGGTCACCTTCGTTAATGGCGTCGAGGAAATCTTCGACGCTTCCAAAACCTCTGCGCAATCTATTCGCTCTCTTATTCTCGATAAAGGACAGTACCTCGAGACTGAGCAGATGTTTCGTGATGGTGGGCAAGGTTGGCCTGTTATCATTCCTAAGGAAGAGCTTCTCGAACCTACTCCTAGTATTAAGGTATGATTTGGTTTCTTGTTGTTTTCTTCTGTGTATGGTTTTTCTTTGAGGTATTTCGTCGAACACTTGATAGGCGTGGTTTTCTTTTTTGCTATTATATTGTGTTGGTTGGTCTAATTTTGTGTTTACTTGCATTGTTGACATTTGTGATTGAATCTTTGGGTACTGGTACCATTTGGGTCAAATTGTGGATTTTTTTTGTTCTTTTGATGGATGTTTGAAGGTAATGTTTGCGATGGATTAGTTGACATTTGGTAGTTTTAAGGAAGAGGGATCCCAAAATGATCAAATTTCTGTTATTGGCTTATCGCCTCATTTTGACCTCCGTAGTATTTGTATATCCGTGTGATTCGATTTATACAACTAGTGTTTCTATCTGAGATGGCTTGGATATTGGGACGAGTCATGGCTCATGGGGCTAATGGATTCTACTACGGAAGTTAACTGCTATATGTGGGTGGATGCTGCTAGCCACAAACGTAATTGTTACCATTGATAACAGTGTCACTAGAGTGTAAGATGCTCAATCCTGACTGAACACTGTCCTTAGCTTGTAGATTTTTCGAACAACTTATTGATTATCAAATCATCAAATATCTTTGGTCAGTGATCTTGGAAATGCTAATTTAACTGGTCAACTTGTTACACAACTTGGCCAGCTACCAAATCTTCAGTACTTGTAAGTATTACTCATTAAAATTTGTTAGCTTGCTGTTTTTTTTCCACTACTTTTGTTTGAGTTGTCCCCTATTACGTATGAGTGTTTTTATGGGGGATGACATAGATAGACTGGTTCAACCTTGTGGCAGCTTTTCTTTGCTGACTTAGATGGTTGCTCTTGATGATTGTTTATATTGACGTTGAACTTTTGGCAATTTTTGTTGGGCTCTTTTTAGAGAATGATCGAAGACAATGCCAATTAACGTATTTAGGATAATTATGGACATTTAGAGTGATATTGCATCCTCGTACCACAGCCTGCCATATTGTGTTATCTTAGTCACCTACAGCTGAAGGAAGTTGGAGACTCAGAGCTCTTTGTTTCATTTTCGTCTTTCTAATTTCAAATTCGATAGGACTGAATAATGCTTCTAGTTGATGAGCAATTACAATTAAAGAATCTAGAGTGTAAGAATTGAGTTCATCCATCCGTTATTTCCCTTATGGAATTGGTATCCTGTCAGCAACATCCATAGCTAGAAATTAAGAACCCCAGTGTTGCTCATGGCAAAGGCTGTGGTGCTTGATATCTATTATTTTGTCAAGAAGGAAGAAGTAGCAAGTACACCTGCAAGGCTGCAAATTTAGATATATGTAGCAATTTCCCGAGGTGATCTTTTCATTGGATTCTGTGGGCAAGTATGCAACAATCAGTACTTATAGCCATGGGGAAAATAAAGAATAAAAGAGACATTGAAAAAATCCATCTTAATGATGACTGCCCTAAGCACTGGCTTGTGCAAATAAGCTACTCTTAGTGTGTAGATGACTAGATGTATGCCAATGATTGATCTTGGTTTGAAAAATGAAAGGAGTCTTGATGGGTAATTGCCTAATTCGGTAGTTTTATACACTTACCAAAATGTAAACTTAATCGACTGATGTGGGAAGGATGGGTCGGATTCACTGATTGCGCATCAATATACAATTTGTGGGTCCAATTGTCATTTCCCTATATGATTACTTTGATCACGTGATATGGGAGTTTACTGTACAACAATATTAAAAGAATTTTTTGACAGTGGACGTTTTATTGTCAATCTTCTTGTTTGAAATCATGCCATCTTATGCTAAGCATTTCAATTCCAAGGATTGGGTGATATTGAGATTTTCAGGTTTGTTATTCCATCTCTGTGGATATTTCGAGTTAGGGTCACCCATCAGACTTCAACTTCACCTTGAACACCCATTTACATCCCTCGAAGAACTACGCCCTAACGCTTGATCAATCGACCCAATCATCACTCGTAACTTCTCTACATCATCAATAATCGTACAATGTCACATTAGGGCTTCAAAATCTTTTGTGTTAAATTCACTTATGATCGTAACTCATAGGCGATGCTCTTCAGTATGTTGTAGATTAAACTTAATATTGAGAGAAGATTGGAATGAATCTTTTTGTTTTCTTGGGGATGAGCCTACAAGCCATTTTTCAAATGTAATTATGTATATGTGGAGGAATACACTGAACTGCAAGATTTATTTCCATCTCTTCATACTAGTACTCTGTAGCCACAAGGGCAGTATAGTCTTGTTATAGTGCACACAGTTAAAAAGATTGATATAAGCATATGAAATATGGAAGTAATAGACAAGATTGCTCAGATTAACATTGAGTTGATCATGTGATGGGGTTTTGCTAGCCTTTTCTCCTTCCTTCCCTCACCCCAGAAAATGGTAGTCAGATATTATTTTCTTATGGTAAGGAATCAATCAAAAGAATCCAAGTTTATTATCTTATACACCCCGGAAGCCGAAGCTTATAAACCTAAAAAGGCTTATGTTGGCTGGCTGTGTGACTTAGCTTCTTAGATTTCTTTTGATGAGGGAATATGATTAATATCTAAGTGTCCCTTTGCCCTACCAACTACTTCTTGTCTTCTGCTTATGCATTTTGGTTGCCATTGCCTCTTGCCATTCAAGATGACACTTCCAATCCAAGCAAAACCAATAAAGGACACGCCTCCCCTCAGCCCCCCTCTCCCCACCTAAATTTAAAGGAAAAGAAAAATGACAATGCACTGATAAATGTAATGTAAACCAGACATCCTTCTTCGCACTTAGCAAAATCAAGTTAGACTCTTTTGCCTCTAGCTTTCCCCCTTTCAAGTGAATGTTATGCGAGGAAGATAAACGGTGACACCTCTTTCTTCAGTTATTAGTTTATACATTGGGCATTTCTAAATAAACCAGTTCTGCTTTAGCACTATAGTAGTACAAGTAAATTGAACGGACAACTGGACAAGTTGTTGGGATCGACAGCGGAGTGGGGGTGGTGCAGAGGCAGCTAATAGATCTTGGCAGCCAGGGAGGTTGGGGGGATAGGGATTGGCAAAAGGTATTGAGCTGTATAGATTAATTTTGACTCAAATCCGGCAAGGGTGATAAAATGGACGCCCTTAGGTTGTTTATTACAGGTCCATACGTCCATTGCTGGGAAAATGGGAAATATACCATTGTATTGTGTTTGTCTTACATTCATTATGGTCAATCTGTTACTCGTACTATTTTTGTCCCCAGAGCCACGATTGTTATGAGTGACTGACCCATCCCGATTTACCATTTTTCACCAATTCCTACTCGAAAGATATATACCAGCCTTCCCCCCGTCCACCAAAGTTGCTGATGCTTGGTGAGGATTTGCATGCTATCGTCAAGGTAAGAGACCCATTTTGGGCTCTGCTTCACAGATACCTGGGATCTTTTGATATGTCCCATTTTGTGCACCAGACACTTTCCCTCCTGCCACACTACCAACCCCTTTTACAATTGACTTTCAGTTTTGAAATGGAATCTGTGACCCAAATTGTTTTTATAAAAAGTGAAAGGAGGTTAGGAACATGATTCGTTCTTGTTTATCCAAGATTTGTATAACAGGGACTTCTGGATGAAATGTTTTGTTTTGCCTTTTGTTCTGGTCTCATAACTGATATAGAGTACTGAATATTGCAGATTTGTAATATGCAGCTGTAAATAACAATGTTTAGTGATTTAGTCACAGAGTTGTTGATAATTAATGTGTGCTTACCAGTTACCAACTATTACCTCTGAGCACTATCTCTGTTTCCCCTTGTGTATTTGAACATAGTATGTGATCGCAAAATGAAGTGGCGAGCCTTTGAATTTTTTTATCCAAACCCAGTCAAATAACATGTGAAATGTGTGTGTTTTCATTTGAACCATCTTATTTATCTATGTTCAACTCAAGCAGGTCATACTAGAATAGTCTGTGTTATATCAATCAATAACTTCATATGCAACCTCTTCAAATTTTGGTACCTGATATGAGAAAGATGGTTCAGATCAGCTTACATTAAGAAACATAAAAAGCTTTCTCAAAAAAACAAAAAACATTCAGAAACATCAACATACCCGTTTGGTAGGCGGTAATAGAAGGGTGGTAATGGTAATGTAATTTTCATTACCATATTTTGATCGTTTGGGATCCTTCAGTTGTAATGCTAAGAAATGAAATCTGGTAATAAAAGTTCTCATTTACCCCATATTCATTACCAGTTGGAACACTGGTATTTGAGTGGAATGGTAATGCATTATTCCACTTGGGGATGAAACACACGTGCAGTGTTTTGTAAAAAGTGAAATCCACACTTTGTTACTGCACCTTTTTCTTTCTCTCTCCTTGATTCCTCTCTCCTTTGTGCAAACATCAATGGAGATCATCAATTCACCTTCCTTCATCACATTTTCTTTCTCTGTCCTCTGCATTTCTGTATTATGGATTTCTTTTGATTTTTATATCATTGATCTCCAATATATACACTGCAAAATGTAAGGAATCAATTTGATTTTGATTATTTTCTTCATATCTTCAATCATTTGTTTGTACCTCGTTGGAAGCCATTGTAGATGAAGGATACAAATGATTTTATTTTTCTTCCATTACCATTCTTACTCTTCCCATTACCGAACACCAAAGCCAAGATATGATTTTTTTTTCTGCCATTACCATTCTTTATTAACACACACCAAACAGTACAATTCAATTACCATATCTCATGTCCATTCCTTCATTCCCATTGCCATTACCTTATTTCATCCCCATTGCCATATTACCAAGTACCAGACGGGCCGTGATGGGTTTCGAACAACATATGGTAGCATCCCTAAAAAAAAAATGGTAACAAGAAGGGTGAGGAAACCATTACAAACGTATAATTGAGGGCTCCAATTCCTTGAGCAATATATCCTTATACAAACCACTAAGAACTTTAATTAAGGACTCCAATTCCTTGAGCAATATATCCTTATACAAACCACTAAGAACTTTAATACATCCTTGAGCAATATATCCTTATGCAAACCCTTAAAAACTATTGAGGCCTCCAATTCCTTCAGCAATATATCCTTGTACCCTATTACAACAACTTATCTGAAAACTTTACAATAAATAGATTGTTTGAAGTTCTCAATGTAAAGCCCCTTCAATGGGAATGCACTTCTCATATTTCTTCCCTTTATTGCATATTACCGAAAAACAGAGCAGTCGGAAAACTTCACAGAATGCTCATCAATGTAAATCAGTAAAACCAAAAAGAGGTATTGGTATACCTTAACATAGAGCCTCTTGTCATGACCAGGAATATGACGAAGAACAGATTCAGCAGCCAGAACATTATAGCCAAATGTGCACAAATGTTGTTGGAAGTCTTGTGAAATTCTTATGGATTCATTGGTACTCTGCATTTCCTTAAAAAATTAAAACCCGAATATTACATCCATAATCACATCACTAATACACTTTTAGTTCAAGAATTAAAAAATAAAAAATCAAGAAAGAAAGAAAGAAAATTGAAACTAAATCAATAACATAAAGCTAAGGGTTCCCAATTTTGAACTAACAAACAAATTAAACCAATTGATCCCCACATGCTCGCTCTTCAAAACTGAAAACTAAAACCGGATTCAATTAAGACGATTGAGAAACAAAATCGATACAATTGAACTCTAGAAAGATGTAGGGATAGAATAATAATGACAATAATACTAAAAGAGATCTTGTAAAATAAAAGAGAAGAGAACACAGACGAAATGTTGAAGTGGCATAAGAGGAGGCCGAGGATGGGGGAATAGGGAGGACTGAAAATGGAGATAGCGAGGACTAAAAGAAAACGAAGAGAATCTTATTTAAAAAAAAGGAAGAGAAAGTACCTAAATTTAGCGATGTGCTTCTGCTTGGGAGGAGACACCATTGTTGATTGAAAATGAAGAAAATAAAGAGAGAAAGACAAGAAGAGGGTGGGAAGAGAGAGTGAGAATAACGTGGTTAAGAGGAAAAGCTGGAACAAATGCAACAGAGAAACTGAAAATTCTCAAAGGGTGCTACCAGTGGGATTCGAACACCACCCTCATAGTATCTAAGGTAGAAGGACCGAGCCGTTACTGTTGCGGAAAACAGTAACTGGATTCTCTCTTTCAAAAGGTGAGGGATTAATCTTGAAGGTAATGTTTGTGATGGATTAGTTGAAATTTGGGAGTTTCGAGAAACGGAGTTCCAAAATTAGTCAAGTTATTCTCTGTTGTTGTCAATATAAGTGGGTTGTTTGTTTCCTGTAACCCTGTTTCTGGTCAGGCTTGAAGAATTTGTTCACTTCGAATGCAACCTTGAGTTGATGCAGTGTAAGTAGTGCATTATTTAAAAAAAAGGAAAATGGGAAAAAAAGTACTGCATTATGCATTTATGCTGGTATTCTGACTTGATTTCGTTGGTGGTGCTTTTCTATCCATTGCATCTTTTCTCTTTACCACACTTATAGTTCAACTAATTACATTATAGATCCACACTTCTCAGAGCTTTCTTTTTTAACTTCTAGAGCTTGATAGTGAAGTCTGAGTACGGGAGCAAAATGGAAAACACTGGAACATCATCAAAACAAAGGGGGAGAAAAGAGTAGGATAGTGGGTTTTTGTAAATCAAGATCATGGCTTAGAAAATTGGCTAGTTAGTCGCTAACTACTGAACTTTTTCTATAAATGTTTATTCTGACTTAAGATCTGTAGCCTACCTAGAATACTTGAGTGCTGCTGATTTTTGATATTGCCTAAACTTATGCTTCAGTACGTTTAAGTAGCTAATCGAGTTGTTCTCTTTTGTGCTGGAGGCAAGACGCTATAAATGGGATAGTAATTATTAATTAGTGAAAATGCTGGAAATATTTGGTGCATGCGGTGACATCCTCGGAAAGGAGCAATGAAGTAATCTTTATTGTTTTTCCTTCTTGTTTATTCTTTTGTAGATTGATTTGAACCCAAAAATATATTAGAAACGCAGATAAAGAGGAATGCAAGAAACTTAATTTGGGCTCCCTGCACTTGCTTTAACTTTGTAACAAATTGGTGACCTGGTTCTCTTATGTGCTTGGTTTAACTATTATTGTTGGCTTGAAATGAGATATTAAATCAGAACTGCTTAATTTCACCGGGGGTCCTCCTTTTGTTTTAACGTTTAACATAGTTGGTCTTTTCCCTACTGCTTTTAGTTCAACTAGATTCATACTACCAATCCATTCTGCATCATATTTTATTTATCTACAAAGCAGCTTAATTTTGAGTATTACTGGAATATGTTATTCCAGAGAAAATTTTGAGAGTAATAAAGATTCCGTATTAATTGTTGAATCACTAGGGTCTAGAGAGGTTCAAGTGCAACATTGAAATATGATTGTCAGAAAAACAATGGTGATTGAGTTGAAGAACCTTTTTGTTGTTTTTTTTTTGGGTGTTTGTTCTTTATTTTTGTACGCCCTTTTTCCCTCTCTACATCCATTCCTTTCAATAATCTAGATGTAATGCTTGCCTTTTGTTTTTGTTCTTGCAGCCTAGAAAAGCAGAAGACAAGAAGCAATGATTGCCCCTTCCCTCAAATCTAGCTGAAGCAGTATGTCTGAAATTCCTACCTCATAAAATGGCATTTTCATTGAAAGTCATTATCCACCATTCCTAATTTTGTAGAGAGAGATTTTTCTCCAAGAACTTTGTTACTGTTCAATTTATCTTCTTCTTTTCTTCTTTTGTCTTTTTAAATATATAGATAGACTATAGATGCTGAATGTGGGAAACATGTTAGCTATAACTGGTACTCTCTTCGTTCCAGATTAGTTGTTACACTTCTAACTTAGGAATGACCCCACAGTCATTTTATTGTCTCTCTCTTCCCACTAACTTTTTTTTTGTCCCCACACCCTTTCATTCAATTAAAAGAATATACCACTAACTCATATCACATCTACTTTTTCAATAAAATAACAATTGATAACCACACAACCACTTAGCACCTAAAATTTTGTGCAAAGGCAAGTGTAACAAGTAATTTGGATGGGACGAAGGGAGTATATTGCAATGAAAATTCTAAGGTTAAAATGCCAAAGGGCGCATGTTGTTTGGTCCAAAAAATGGAGGTTGCCCCACTTTTTTTTTCTTTGATTTACATAAATTATAAAAATGATTTATAAAATACCAAAATATAACTTCTGAAAATACCAAAATTATTTTCTGAAAATTATTTGGTTTTTAATGGTAACTAAGTAACACCCCAATATTATGTTAATCCCTCACCCCTCTCCAGCAACCATGGTGGCGCCGGAAATTCCACCGACACGCCGACAACCAATTACGCTGGCACTTCCCAGATTTGCCGACAACGATATACTTTTCACGGCAGTCGACCTCTCTTCTCGTCTCTGGAGCCCGAAAAATTTTACGTTCAATTTTTTCATTGCCTCGTTCCCTTTCCCGTCGATTGTCTCTCCTCTCTCCAGTTTCACCACGTTGTTCTCTCCTCTCTCCCAGCTTCACCACGTCGTCCTAGAACATCCAAATGGACTACAAACTAGATCTGAAAAATGAAAATTAGACCTGAAAATTATTCATATGAGAAAATCCATCACAAACGATAGATAAAATCGACTTGTTGTTTGATCAACGATAAAATGGGGTTAATTCATATTGGCAGGTCATTCATGGTTTCCAGAAAAGAGGACAGCGGAAAAAGATAAATAACAGACACGCAGTTGAAAAGATTGAGGCG

mRNA sequence

ATTTTTTACAGACCGTGTAGAAGAATCGGAGGAAACAACGAAATGATGGGCTTCATAAGTTCATAAGTGTACTAGTAGAAATAATAGACATTCTCCGCCCCGGTACCACCATCCTCGCCTTCGCCTCTCTCCCGGCAGCAGCATCCGCCTCTAAAGTTTCAGAAATCCAGAATGTTGAAGTTCTTATCAAAGGTGAAACTAGAGTTCAATGCACTGGACTCCCGTGCAGGTGCTTGCATGGAGTTCTTAGCTCAGTGCAGTGCCGGCAAAGCCAGGGACTCAAACCCCAGTTGCCAAGTCGAAGTTAAGCGCCGCACCGACGACCATCCTCCTCAAATCAAGGTCACCTTCGTTAATGGCGTCGAGGAAATCTTCGACGCTTCCAAAACCTCTGCGCAATCTATTCGCTCTCTTATTCTCGATAAAGGACAGTACCTCGAGACTGAGCAGATGTTTCGTGATGGTGGGCAAGGTTGGCCTGTTATCATTCCTAAGGAAGAGCTTCTCGAACCTACTCCTAGTATTAAGCCTAGAAAAGCAGAAGACAAGAAGCAATGATTGCCCCTTCCCTCAAATCTAGCTGAAGCAGTATGTCTGAAATTCCTACCTCATAAAATGGCATTTTCATTGAAAGTCATTATCCACCATTCCTAATTTTGTAGAGAGAGATTTTTCTCCAAGAACTTTGTTACTGTTCAATTTATCTTCTTCTTTTCTTCTTTTGTCTTTTTAAATATATAGATAGACTATAGATGCTGAATGTGGGAAACATGTTAGCTATAACTGGTACTCTCTTCGTTCCAGATTAGTTGTTACACTTCTAACTTAGGAATGACCCCACAGTCATTTTATTGTCTCTCTCTTCCCACTAACTTTTTTTTTGTCCCCACACCCTTTCATTCAATTAAAAGAATATACCACTAACTCATATCACATCTACTTTTTCAATAAAATAACAATTGATAACCACACAACCACTTAGCACCTAAAATTTTGTGCAAAGGCAAGTGTAACAAGTAATTTGGATGGGACGAAGGGAGTATATTGCAATGAAAATTCTAAGGTTAAAATGCCAAAGGGCGCATGTTGTTTGGTCCAAAAAATGGAGGTTGCCCCACTTTTTTTTTCTTTGATTTACATAAATTATAAAAATGATTTATAAAATACCAAAATATAACTTCTGAAAATACCAAAATTATTTTCTGAAAATTATTTGGTTTTTAATGGTAACTAAGTAACACCCCAATATTATGTTAATCCCTCACCCCTCTCCAGCAACCATGGTGGCGCCGGAAATTCCACCGACACGCCGACAACCAATTACGCTGGCACTTCCCAGATTTGCCGACAACGATATACTTTTCACGGCAGTCGACCTCTCTTCTCGTCTCTGGAGCCCGAAAAATTTTACGTTCAATTTTTTCATTGCCTCGTTCCCTTTCCCGTCGATTGTCTCTCCTCTCTCCAGTTTCACCACGTTGTTCTCTCCTCTCTCCCAGCTTCACCACGTCGTCCTAGAACATCCAAATGGACTACAAACTAGATCTGAAAAATGAAAATTAGACCTGAAAATTATTCATATGAGAAAATCCATCACAAACGATAGATAAAATCGACTTGTTGTTTGATCAACGATAAAATGGGGTTAATTCATATTGGCAGGTCATTCATGGTTTCCAGAAAAGAGGACAGCGGAAAAAGATAAATAACAGACACGCAGTTGAAAAGATTGAGGCG

Coding sequence (CDS)

ATGTTGAAGTTCTTATCAAAGGTGAAACTAGAGTTCAATGCACTGGACTCCCGTGCAGGTGCTTGCATGGAGTTCTTAGCTCAGTGCAGTGCCGGCAAAGCCAGGGACTCAAACCCCAGTTGCCAAGTCGAAGTTAAGCGCCGCACCGACGACCATCCTCCTCAAATCAAGGTCACCTTCGTTAATGGCGTCGAGGAAATCTTCGACGCTTCCAAAACCTCTGCGCAATCTATTCGCTCTCTTATTCTCGATAAAGGACAGTACCTCGAGACTGAGCAGATGTTTCGTGATGGTGGGCAAGGTTGGCCTGTTATCATTCCTAAGGAAGAGCTTCTCGAACCTACTCCTAGTATTAAGCCTAGAAAAGCAGAAGACAAGAAGCAATGA

Protein sequence

MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTFVNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKPRKAEDKKQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo01046.1Spo01046.1mRNA


Homology
[Close]
BLAST of Spo01046.1 vs. NCBI nr
Match: gi|902181799|gb|KNA09803.1| (hypothetical protein SOVF_150170 [Spinacia oleracea])

HSP 1 Score: 256.5 bits (654), Expect = 2.400e-65
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 1 

		  

Query: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60
           MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF
Sbjct: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60

Query: 61  VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP 120
           VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP
Sbjct: 61  VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP 120

Query: 121 RKAEDKKQ 129
           RKAEDKKQ
Sbjct: 121 RKAEDKKQ 128
[Close]
BLAST of Spo01046.1 vs. NCBI nr
Match: gi|731362086|ref|XP_010692709.1| (PREDICTED: uncharacterized protein LOC104905775 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 247.7 bits (631), Expect = 1.100e-62
Identity = 122/128 (95.31%), Postives = 126/128 (98.44%), Query Frame = 1 

		  

Query: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60
           MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF
Sbjct: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60

Query: 61  VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP 120
           VNGVEE+FDASKTSAQ+IR+LILDKGQYLETEQMFRDGGQ WPVIIP+EEL EPTPSIKP
Sbjct: 61  VNGVEEVFDASKTSAQTIRTLILDKGQYLETEQMFRDGGQAWPVIIPEEELREPTPSIKP 120

Query: 121 RKAEDKKQ 129
           RKAEDKKQ
Sbjct: 121 RKAEDKKQ 128
[Close]
BLAST of Spo01046.1 vs. NCBI nr
Match: gi|729400142|ref|XP_010553988.1| (PREDICTED: uncharacterized protein LOC104823900 [Tarenaya hassleriana])

HSP 1 Score: 208.4 bits (529), Expect = 7.500e-51
Identity = 99/128 (77.34%), Postives = 114/128 (89.06%), Query Frame = 1 

		  

Query: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60
           MLKFLSKV++EFNALD R  +CMEFLAQC+A KA++SNP+CQV VKRRTDDHPPQI VTF
Sbjct: 1   MLKFLSKVRIEFNALDPRLASCMEFLAQCNATKAKESNPACQVVVKRRTDDHPPQIHVTF 60

Query: 61  VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP 120
           VNGVEE+FDA+ TSAQSIR +ILDKGQYLETEQMFR+ G+ WPVIIP EEL +P P +KP
Sbjct: 61  VNGVEEVFDATSTSAQSIRKMILDKGQYLETEQMFREAGEQWPVIIPGEELHQPAPGVKP 120

Query: 121 RKAEDKKQ 129
           RKAE+KKQ
Sbjct: 121 RKAEEKKQ 128
[Close]
BLAST of Spo01046.1 vs. NCBI nr
Match: gi|1021552361|ref|XP_016167510.1| (PREDICTED: uncharacterized protein LOC107609959 isoform X1 [Arachis ipaensis])

HSP 1 Score: 203.4 bits (516), Expect = 2.400e-49
Identity = 95/128 (74.22%), Postives = 114/128 (89.06%), Query Frame = 1 

		  

Query: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60
           MLKFLSKVK+E+NALD R  +CMEF+AQC++ KAR+SNP+CQVEVKRRTD+HPPQI VTF
Sbjct: 1   MLKFLSKVKIEYNALDPRIASCMEFMAQCNSRKARESNPACQVEVKRRTDEHPPQITVTF 60

Query: 61  VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP 120
           VNGVE+ FDA+ T AQSIR++IL+KGQ LETEQMFR+ G+ WPVIIPKEEL +P P +KP
Sbjct: 61  VNGVEQAFDATSTPAQSIRTMILEKGQTLETEQMFREAGESWPVIIPKEELSQPAPGVKP 120

Query: 121 RKAEDKKQ 129
           RKAE+KKQ
Sbjct: 121 RKAEEKKQ 128
[Close]
BLAST of Spo01046.1 vs. NCBI nr
Match: gi|1012214165|ref|XP_015933971.1| (PREDICTED: uncharacterized protein LOC107460157 [Arachis duranensis])

HSP 1 Score: 202.6 bits (514), Expect = 4.100e-49
Identity = 95/128 (74.22%), Postives = 113/128 (88.28%), Query Frame = 1 

		  

Query: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60
           MLKFLSKVK+E+NALD R  +CMEF+AQC++ KAR+SNP+CQVEVKRRTD+HPPQI VTF
Sbjct: 1   MLKFLSKVKIEYNALDPRIASCMEFMAQCNSRKARESNPACQVEVKRRTDEHPPQITVTF 60

Query: 61  VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP 120
           VNGVE+ FDA+ T AQSIR++IL+KGQ LETEQMFR+ G+ WPVIIPKEEL  P P +KP
Sbjct: 61  VNGVEQAFDATSTPAQSIRTMILEKGQTLETEQMFREAGESWPVIIPKEELSHPAPGVKP 120

Query: 121 RKAEDKKQ 129
           RKAE+KKQ
Sbjct: 121 RKAEEKKQ 128
[Close]
BLAST of Spo01046.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSY6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_150170 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.700e-65
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 1 

		  

Query: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60
           MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF
Sbjct: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60

Query: 61  VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP 120
           VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP
Sbjct: 61  VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP 120

Query: 121 RKAEDKKQ 129
           RKAEDKKQ
Sbjct: 121 RKAEDKKQ 128
[Close]
BLAST of Spo01046.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BHT9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g022020 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 7.800e-63
Identity = 122/128 (95.31%), Postives = 126/128 (98.44%), Query Frame = 1 

		  

Query: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60
           MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF
Sbjct: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60

Query: 61  VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP 120
           VNGVEE+FDASKTSAQ+IR+LILDKGQYLETEQMFRDGGQ WPVIIP+EEL EPTPSIKP
Sbjct: 61  VNGVEEVFDASKTSAQTIRTLILDKGQYLETEQMFRDGGQAWPVIIPEEELREPTPSIKP 120

Query: 121 RKAEDKKQ 129
           RKAEDKKQ
Sbjct: 121 RKAEDKKQ 128
[Close]
BLAST of Spo01046.1 vs. UniProtKB/TrEMBL
Match: A0A068UIG7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024686001 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 8.400e-49
Identity = 96/128 (75.00%), Postives = 114/128 (89.06%), Query Frame = 1 

		  

Query: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60
           MLKFLSKV++EFNALD R  ACMEFLAQC+A KA++SNP+CQV+VKRRTDD PPQI VTF
Sbjct: 1   MLKFLSKVRIEFNALDPRTAACMEFLAQCNARKAKESNPACQVQVKRRTDDQPPQITVTF 60

Query: 61  VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP 120
           VNGVEE FDA+ T AQ+IR++IL+KGQYLETEQMFR+ G+ WPVIIP+EEL +P P IKP
Sbjct: 61  VNGVEEKFDATATPAQTIRNMILEKGQYLETEQMFREAGERWPVIIPEEELNQPFPGIKP 120

Query: 121 RKAEDKKQ 129
           +KAE+KKQ
Sbjct: 121 KKAEEKKQ 128
[Close]
BLAST of Spo01046.1 vs. UniProtKB/TrEMBL
Match: A0A059BP47_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01631 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.100e-48
Identity = 94/124 (75.81%), Postives = 110/124 (88.71%), Query Frame = 1 

		  

Query: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60
           MLKFLSKVK+EFNALD R  +CMEFLAQC+A KA++SNP+CQV VKRRTDDHPPQI VTF
Sbjct: 1   MLKFLSKVKIEFNALDPRIASCMEFLAQCNARKAKESNPACQVVVKRRTDDHPPQIAVTF 60

Query: 61  VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP 120
           VNGVEE+FD + T+AQSIR++ILDKGQ+LETEQMFR+ G+ WPVIIP+EEL +P P  KP
Sbjct: 61  VNGVEEVFDGTTTTAQSIRTMILDKGQHLETEQMFREAGEAWPVIIPEEELRQPAPGTKP 120

Query: 121 RKAE 125
           RKAE
Sbjct: 121 RKAE 124
[Close]
BLAST of Spo01046.1 vs. UniProtKB/TrEMBL
Match: A0A0D2ZPT5_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.400e-48
Identity = 96/128 (75.00%), Postives = 111/128 (86.72%), Query Frame = 1 

		  

Query: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60
           MLKFLSKVK+EFN LD R  +C+EFLAQC+A KA++SNP+CQV VKRRTDD PPQI VTF
Sbjct: 1   MLKFLSKVKIEFNTLDPRLASCVEFLAQCNARKAKESNPNCQVLVKRRTDDQPPQISVTF 60

Query: 61  VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP 120
           VNGVEE FDA+ TSAQSIR +ILDKGQYLETEQMFR+ G+ WPVIIP+EE+ +  P +KP
Sbjct: 61  VNGVEEAFDAAATSAQSIRKMILDKGQYLETEQMFREAGEQWPVIIPEEEIHQEAPGVKP 120

Query: 121 RKAEDKKQ 129
           RKAEDKKQ
Sbjct: 121 RKAEDKKQ 128
[Close]
BLAST of Spo01046.1 vs. TAIR (Arabidopsis)
Match: AT5G39600.1 (Ribosomal protein L53, mitochondrial (InterPro:IPR019716))

HSP 1 Score: 198.4 bits (503), Expect = 2.800e-51
Identity = 95/127 (74.80%), Postives = 110/127 (86.61%), Query Frame = 1 

		  

Query: 1   MLKFLSKVKLEFNALDSRAGACMEFLAQCSAGKARDSNPSCQVEVKRRTDDHPPQIKVTF 60
           MLKFLSKV++EFN LD R  +C+EFLAQC+A KA++SNP+CQV VKRRTD+ PPQI VTF
Sbjct: 1   MLKFLSKVRIEFNTLDPRLASCVEFLAQCNARKAKESNPNCQVLVKRRTDEQPPQITVTF 60

Query: 61  VNGVEEIFDASKTSAQSIRSLILDKGQYLETEQMFRDGGQGWPVIIPKEELLEPTPSIKP 120
           VNGVEE FDA+ TSAQSIR +ILDKGQYLETEQMFR+ G+ WPVIIP EELL+  P +KP
Sbjct: 61  VNGVEEAFDAAATSAQSIRKMILDKGQYLETEQMFREAGEQWPVIIPDEELLQEAPGVKP 120

Query: 121 RKAEDKK 128
           RKAEDKK
Sbjct: 121 RKAEDKK 127
The following BLAST results are available for this feature:
BLAST of Spo01046.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902181799|gb|KNA09803.1|2.4e-65100.hypothetical protein SOVF_1501... [more]
gi|731362086|ref|XP_010692709.1|1.1e-6295.3PREDICTED: uncharacterized pro... [more]
gi|729400142|ref|XP_010553988.1|7.5e-5177.3PREDICTED: uncharacterized pro... [more]
gi|1021552361|ref|XP_016167510.1|2.4e-4974.2PREDICTED: uncharacterized pro... [more]
gi|1012214165|ref|XP_015933971.1|4.1e-4974.2PREDICTED: uncharacterized pro... [more]
back to top
BLAST of Spo01046.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QSY6_SPIOL1.7e-65100.Uncharacterized protein OS=Spi... [more]
A0A0J8BHT9_BETVU7.8e-6395.3Uncharacterized protein OS=Bet... [more]
A0A068UIG7_COFCA8.4e-4975.0Uncharacterized protein OS=Cof... [more]
A0A059BP47_EUCGR1.1e-4875.8Uncharacterized protein OS=Euc... [more]
A0A0D2ZPT5_BRAOL1.4e-4875.0Uncharacterized protein OS=Bra... [more]
back to top
BLAST of Spo01046.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo01046.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G39600.12.8e-5174.8Ribosomal protein L53, mitocho... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019716Ribosomal protein L53, mitochondrialPFAMPF10780MRP_L53coord: 12..63
score: 6.2
NoneNo IPR availablePANTHERPTHR33618FAMILY NOT NAMEDcoord: 1..120
score: 8.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0009658 chloroplast organization
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0042793 plastid transcription
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0006364 rRNA processing
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
cellular_component GO:0009507 chloroplast
cellular_component GO:0009508 plastid chromosome
cellular_component GO:0009941 chloroplast envelope
molecular_function GO:0005515 protein binding
molecular_function GO:0008080 N-acetyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo061720.73Barchart | Table
Spo224560.73Barchart | Table
Spo052100.72Barchart | Table
Spo165680.72Barchart | Table
Spo228090.72Barchart | Table
Spo188400.72Barchart | Table
Spo227120.71Barchart | Table
Spo137800.71Barchart | Table
Spo243880.71Barchart | Table
Spo271000.71Barchart | Table
Spo039720.71Barchart | Table
Spo181500.71Barchart | Table
Spo197760.71Barchart | Table
Spo261950.71Barchart | Table
Spo189420.71Barchart | Table
Spo168730.71Barchart | Table
Spo111840.71Barchart | Table
Spo191950.71Barchart | Table
Spo208890.70Barchart | Table
Spo239780.70Barchart | Table
Spo239220.70Barchart | Table
Spo266940.70Barchart | Table
Spo208060.70Barchart | Table
Spo266610.70Barchart | Table
Spo184790.70Barchart | Table
Spo132040.69Barchart | Table
Spo100240.69Barchart | Table
Spo195000.69Barchart | Table
Spo094410.69Barchart | Table
Spo257480.69Barchart | Table
Spo128740.69Barchart | Table
Spo012360.69Barchart | Table
Spo158410.68Barchart | Table
Spo094930.68Barchart | Table
Spo162240.68Barchart | Table
Spo259130.68Barchart | Table
Spo177690.68Barchart | Table
Spo009040.68Barchart | Table
Spo050750.68Barchart | Table
Spo226380.68Barchart | Table
Spo043500.68Barchart | Table
Spo033580.68Barchart | Table
Spo247500.68Barchart | Table
Spo024720.68Barchart | Table
Spo133740.68Barchart | Table
Spo087650.68Barchart | Table
Spo197990.68Barchart | Table
Spo065910.67Barchart | Table
Spo011710.67Barchart | Table
Spo052630.67Barchart | Table
Spo061680.67Barchart | Table
Spo006160.67Barchart | Table
Spo115960.67Barchart | Table
Spo121960.67Barchart | Table
Spo148570.67Barchart | Table
Spo148580.67Barchart | Table
Spo153630.67Barchart | Table
Spo161060.67Barchart | Table
Spo170650.67Barchart | Table
Spo180960.67Barchart | Table
Spo183930.67Barchart | Table
Spo204100.67Barchart | Table
Spo268500.67Barchart | Table
Spo030590.66Barchart | Table
Spo244150.66Barchart | Table
Spo244400.66Barchart | Table
Spo245030.66Barchart | Table
Spo029220.66Barchart | Table
Spo009200.66Barchart | Table
Spo018310.66Barchart | Table
Spo013140.66Barchart | Table
Spo266320.66Barchart | Table
Spo012410.66Barchart | Table
Spo157310.66Barchart | Table
Spo266680.66Barchart | Table
Spo109810.66Barchart | Table
Spo182960.66Barchart | Table
Spo165630.66Barchart | Table
Spo153340.66Barchart | Table
Spo090940.66Barchart | Table
Spo272100.66Barchart | Table
Spo081240.66Barchart | Table
Spo079280.66Barchart | Table
Spo146540.66Barchart | Table
Spo070650.66Barchart | Table
Spo127420.66Barchart | Table
Spo188600.66Barchart | Table
Spo227320.66Barchart | Table
Spo267270.66Barchart | Table
Spo231270.66Barchart | Table
Spo127250.66Barchart | Table
Spo111800.66Barchart | Table
Spo243660.66Barchart | Table
Spo044530.65Barchart | Table
Spo143100.65Barchart | Table
Spo129260.65Barchart | Table
Spo189080.65Barchart | Table
Spo192200.65Barchart | Table
Spo093530.65Barchart | Table
Spo006800.65Barchart | Table
Spo212890.65Barchart | Table
Spo062870.65Barchart | Table
Spo061150.65Barchart | Table
Spo060800.65Barchart | Table
Spo048510.65Barchart | Table
Spo151220.65Barchart | Table
Spo021810.65Barchart | Table
Spo156200.65Barchart | Table
Spo164100.65Barchart | Table