Spo00967 (gene) | SpinachBase

Overview


Name	Spo00967
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Endoribonuclease L-PSP family protein
Location	chr4 : 51454968 .. 51460499 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAGACAACCTCCTCACACTCACACTCGCACAGAGAAAGTTGATTATAGAGAGAGGGAGAATCACACATACACAGACAAAGAGAAAATGGCGTGGTGCGCAGCAAGGAGCTTCCAATTACCGGCGATTGACGGCAGCGCACTTCGCGTCAAAGGCCAAATAGCCGCCGGAGTAGGTTGCGTTTCATTCGCTGGCTCCAACTTCTGGCGCTCCCCTTCTTCTACCTCTCGTTCTAAACCCTTTGCTTGCCGTGCCGTTTCTACCGATGCCGGTAATCTCTCTCCACCCTTTTACACATTGTTCCAATGAACATGTAATTCCAAATTAGTATTTGCTTAATTTTGTGATTGTGAATTAGTAGTTGCTTAATTTTGTGTCATTCTACACTTTATCGAATGTTAAATTGAATTTAATTGTAGTTATTGGTTCTTCTTATTTTTGCAATGCAATTGGAGTTTGCTAGTTTTGGATGCTGTCTCTATGAATTAGCTTTTTCTGGGAAAAATTTGGTGGATAAATAAGTGCTAGAAACTTAGGATAAGTGATGTTGTTCTGTCAGTTTGTATTGAAAAAAGGCTTCGAGTAATACCCCATTCTAGAGGAAGGCATTTATCAGTTATTGGGGATTGTATTTTCTGTTCGGAGTCGGTTGTAGTCCTAATTATATAAAGAATCGGGGTGTAGAATGGGGCATAAGAGGCTGAATAGCTTGACTGAATTGATACGACTGATGTTACAAAGTTGGTGGTTTTCTGCTTCGTATAAATTTAAAGCAGCTTGCACAGTATATTATGATTTCTTTAGTTAAATGTTGTTATTGAGAAGGATTTTTGACCTCTTGGTTTCGGGAAATGATTATTCTAATGCAATAAAGTAGGTTTCAGTTTTAACAATAGGCTGTTGGGTTTAATGGGGATGGTTCAAGCTTAATGAAGAAGCAATAAGGATGGTGAGCGTTGGTGTCACGGTCCGATTGATTTGACACCGTATCGTACGGCGCGCTCTTGCCTATGGGGCACCAAGGACGCAAGCCTTGTACGGAAAGTGAATCTTTAGGCTCTCGGGCACGAGCGGGTGCTTGCTTCAGAATTGGCACTCTTGCCTATTGGCGACAAGAGCGGGGGTCGATGGTCGATCGGGGCGCTTTTGTGCGCACAACATGCACAAGCGGGACCGACGACAATAATGTATCTATTTTGAGGGAGACTTTGTTGAGTCTTGGAAAACTTAAAAACATGCGACAACACAATATCTATATAGGCTAACAACAACGCAAAATTAAGCAAAGACAACTTCTGATGAGGGGTATTGGTCCATACCCGAAACAGAGGTTTATTTTGAATTAGCTAAAAACTGTGAGTGAACACTGGAATGACAGTAACATAATAGTTCTCTCTAAAGCCTAGAAAACTATTAGAAAGATCATAGAAAGCAATAGATAAGAGAAATACAAGTGAAAGAAGGTTGGGTTCTAACAGTTGGTGTAGAAGTTAAGTGATGTAATGCTTGGTGTAAAGCAAGGAAGAAGCAAGGCAAAAGGGAAAATTGATGGTGCACGATTGCACGTCCGTACCAAAAGGTACACTTTCAGGCAGCTTAGTTCAGTGAGGGTCAGAAGCAAGGCTGTAAGGAAAAGCATGGCTGTGCGCATTCAGCATGTTCGTACATGGGACTATGGGAGGCACGTCCTTGTCAATCCAGAAAACTGGACATGTGACAGTAATCTGATTTTTCATTAGTGTTTGATGAAACCTAATATAAATAGAACCCTTTGCAGCGATTTGTATGTTCTTGTAGAGAGAAATTTTGGAGGGAGCATTTCATGATTAATTGAATGCTTCTACTTTCATCAGTCATCCTACATGGATTACTCCACAATGCATGTTTGCGTTTCTCCAATAGCTCAGGTCCGCACGTTAATTACGATGTGTTCTTTCCTTGCTTTTCTCTTCCGAATCGTGTTTGTTCGATTTCTACTTGCTTTTGTTTGTGGTTCATTGCTACAATTAGTTTGTAGTTTCACTTGTCTAAATCACAACATAGGCCACATTCCACATTTATCCACATTTATGGTGAATTTTTTTCCTCTTTGGCCATTATTTATGTCAGACTCATCATATGACTATCATCACGTGCATGAACACAGACCTTAGCGAAGCCATGATGATTCTATGAGATATTAGAAATGTCGTATAATCTTTCAAGTTAAATAAAGAAATGCCGTATTTTCACATTAGGACAGTGAATCTTGAATACTTGATAAACTTCGGTGATCAAGTTTTTGATCATTCAAACCATCAAAGCCTCAAAGGCATATAATATTAAAAGTGTCATTCCTCTCAGTAGGTATTTTTATTTTCTATGTCTCTTCTTATAGAGATTCGATCGTATTTTATATTTATGCAGGGTTGGTTTGTTTTTTTTTAAAAAAACTTGTCGAGGTTAACATAATTGGTCAGATTAGGGGAAATTAAAACAAATTTATTTACCAATCATTCTAGCAATCACAAAAACTGAGTGGATGAGGACTTCCTCTTACCAAGTAGGTTGTAGGAGTTTTTCAGCGTAGATATTCCAAAGATGAGCTCCTTGGTAATAAGCTACATTAGGCTATATGTACAGTAATCATGTTTTCTTAATTAGCCGATACTTTATGGGTTGATCCTTTTTGCATATACAGGTTTAAAGGAAGTTGTTCAAACTGACAAGGCTCCTGCAGCATTGGGACCATATTCTCAAGCCATCAAAGCAAACAACATGCTCTTTGTTTCTGGTGTTCTAGGTCTTGTGCCAGAGGTTTGTATTTTCTCATTTAAGTTGTTTTTAGCTTATTTGTTATATTTACTTGCTTTTGTACATGTCTGAATGCAGACTGGAAAGTTTGTATCAGAAGATGTGGAGGATCAAACTGAGCAGGTAAATAAGATTTTTGCAAACTCACATGGGAACATTATAATTCGTTACTTCACAATCTTGTGCTGCCTTTCAACCTTTGATTATTACAATCAGGAAATCATGCTTGTGTATGGGTGTCCAGTGTCCTATGGTCTAAACGTCTAGTAATTGTGAAGGGTTGTGGTATCTTGAATTCTTAATCGCTGGATGGTGAATGAATAGATTTATGAGCCTTTAAATCCATTTAACAAGTTTTCTTGCCAGACTTTATGAGTAACTGCAACTTTATTTGGTTAATTTTTACTTCGTATCTTGTAATGCTCACCGATGCTTATTTACTCCGTATCTTGTAATGCTCACCAATGCTTATAGTGAAATCTGTCAATTGTTAGCGACAGAAATTTTTTTATTTTTTATTTTTACAGGAAGAACAATATTAATAAGCCATACTACATCTATAATGATAAAATAGATCTGTATACCATAGACTTAGAGAAAATATACATGCATTCTAAAGCACAACTCATACACCACCGCTTCTAGCTCTACGTGAACAATGATTTTCGATATTCGCATCTTTCCAAGTAGAACCCTTCGCGCACGAATTGTTCCGATTGACGAGTCGATGATAAAATCCAGATCACCTTCCCAATCATTGAAACCCTAAAAAACATATTAACCTAGAAAAATCTAGGGAAAACCCAAGAATAACCACGGAAAAGAATAAAAAAAAGAGACAAAACCTGACTACTACCTGAGAAAACAATGGAAAAACAAAAGAAGGGACGAAAATAGTTTAATTTCCGAAGAAATTAGACTTAAACTATTTCCGGCCTAGACTGCCCAGAAAACTGAAACCCTAGAAGACGAGGGAGAAGAGAGAGAGGAGAGAAAGAAAGGAACAAGCAAGTATACCTTGCATCATGCTTGTTGATGCATATCCTTTTTCTTTTGTCAAGTATACCATTTGTGAGGCGCAATTTTGGTCGAGGTGGGAAGTGGGCTCCTAATCTATGAAGTGCTTTATGCTATCTTTTGTTGGTAATCTATGCTCTGTAGGGAATTTCTCAGTGCTCTCCTCCAACGGGTTATTGATTACTCCGTATTATGTACTCCTTAAGTCCGTAATAGTTAGCTAAGACAAATATATTCAGCGAGTACCAAATTGGCTACAGTGGCCTAGTAGTATCAGATGCTTGTCAGCATTTTAAGTCCAGGTTCTGTTTTTCATTGGTCAATCAAATGGCTGAAATTCTTGAAAACTGTTCAAATAATCTACCTTTAGTTTATATAATTGGTGGCATTTTGTTTAATAAGAGAACTTGCATGGATCTGATTTGAATAACACCTTATCCCTTTTCATTTAGACTTTTATTCAGCACCATATTTTGGTTAGGAGGTGATACAATTACAAGATGTTGTGCTGTTCTATTCTGTTTTTAGAATAACTACATATAAAGTACAAAGATATACACTGTATTTTAGTTCTGTACATAAAGTACATTGATGTATGCAAGTGAGCTTTTTGCCATGTACACTGTATTTAGTTCTGTACATAATGTACATTGATGTATGCAAGTGAGCTTTTTGCTAAAAAGGTATACACTGTATTTAGTTCTTTACATGGGGTATTTGTTTTTGACTGAACTGTCGTATATTTCTCCACCATCCTAACTTTCTTGCTTCCAATATGACATACACGGACTCACAACTTTTTTATGTGGTTAGTTCTGTTTTCAATGAATTTGCTGAATCCCAGCCCATGAGATTTGAGAGGGTGTTGACATATTTAAGTTATCCTACATTGTCAGATTCTCAAAAACATGGGTGAAATTTTGAAAGCTAGTGGAGCAAGCTATTCATCTGTTGTCAAAACGACAATTATGTAAGTGCATTAGCATCTCAGTCTTGGTTGGATTTTGGTATTTATAATAGAAATGTACTCAGTAATATCTTGTTTGATTTTGATTTTAGGTTGGCAGACTTGAAAGACTTCAAGAAAGTAAATGATATATATGCTAAGTGTGAGTGAATCATATATATCATACCAACCAATTTATTCACAGCGGACCTTGTTAGTTGTCCTATAATATTCAAAAGGAGTATTTTGAAAATTGGACTTTTGTTCTTGCAGATTTTTCATCCACACCTCCAGCTCGATCAACTTACCAGGTTGCGGCATTGCCTCTTGATGCGAGAATTGAGATAGAGTGCATTGCTGCGCTGTAGGTTCACTCTTTAATTAATTTCGTTTCTGGCTGACATAGAGGAGATCAATAAATTAAGTTATCACGGCTGAGGAGCATCTTGATGCATTGAGCATCCTATTCCTACTATGTTTGTTTTAGTTTCCTTTTACTTGCTGTTGGATGTACATGATTCAATTCTCTTAACTCAAAGTATGTCAAAATTTAACCCTTGATCTCATTGGATCTCACGTCTTACTGTGTTGGGTGGGTGCTATTGGATTCTTGTTCCTTTGCTTTGATGAACCATGTGTGACTCTATATTCGGTACTTGTAATGCTCTTAATCTCTTATGTGTAGAGTCAACTGGTGTGTATGTTTCAGTTTCATATCGCGCACATTGGTATGTGCCAATTTGTGCTTAATGCACAAATATATTAAAGTTTGGGCA

mRNA sequence

TGTAGACAACCTCCTCACACTCACACTCGCACAGAGAAAGTTGATTATAGAGAGAGGGAGAATCACACATACACAGACAAAGAGAAAATGGCGTGGTGCGCAGCAAGGAGCTTCCAATTACCGGCGATTGACGGCAGCGCACTTCGCGTCAAAGGCCAAATAGCCGCCGGAGTAGGTTGCGTTTCATTCGCTGGCTCCAACTTCTGGCGCTCCCCTTCTTCTACCTCTCGTTCTAAACCCTTTGCTTGCCGTGCCGTTTCTACCGATGCCGGTTTAAAGGAAGTTGTTCAAACTGACAAGGCTCCTGCAGCATTGGGACCATATTCTCAAGCCATCAAAGCAAACAACATGCTCTTTGTTTCTGGTGTTCTAGGTCTTGTGCCAGAGACTGGAAAGTTTGTATCAGAAGATGTGGAGGATCAAACTGAGCAGATTCTCAAAAACATGGGTGAAATTTTGAAAGCTAGTGGAGCAAGCTATTCATCTGTTGTCAAAACGACAATTATGTTGGCAGACTTGAAAGACTTCAAGAAAGTAAATGATATATATGCTAAGTATTTTTCATCCACACCTCCAGCTCGATCAACTTACCAGGTTGCGGCATTGCCTCTTGATGCGAGAATTGAGATAGAGTGCATTGCTGCGCTGTAGGTTCACTCTTTAATTAATTTCGTTTCTGGCTGACATAGAGGAGATCAATAAATTAAGTTATCACGGCTGAGGAGCATCTTGATGCATTGAGCATCCTATTCCTACTATGTTTGTTTTAGTTTCCTTTTACTTGCTGTTGGATGTACATGATTCAATTCTCTTAACTCAAAGTATGTCAAAATTTAACCCTTGATCTCATTGGATCTCACGTCTTACTGTGTTGGGTGGGTGCTATTGGATTCTTGTTCCTTTGCTTTGATGAACCATGTGTGACTCTATATTCGGTACTTGTAATGCTCTTAATCTCTTATGTGTAGAGTCAACTGGTGTGTATGTTTCAGTTTCATATCGCGCACATTGGTATGTGCCAATTTGTGCTTAATGCACAAATATATTAAAGTTTGGGCA

Coding sequence (CDS)

ATGGCGTGGTGCGCAGCAAGGAGCTTCCAATTACCGGCGATTGACGGCAGCGCACTTCGCGTCAAAGGCCAAATAGCCGCCGGAGTAGGTTGCGTTTCATTCGCTGGCTCCAACTTCTGGCGCTCCCCTTCTTCTACCTCTCGTTCTAAACCCTTTGCTTGCCGTGCCGTTTCTACCGATGCCGGTTTAAAGGAAGTTGTTCAAACTGACAAGGCTCCTGCAGCATTGGGACCATATTCTCAAGCCATCAAAGCAAACAACATGCTCTTTGTTTCTGGTGTTCTAGGTCTTGTGCCAGAGACTGGAAAGTTTGTATCAGAAGATGTGGAGGATCAAACTGAGCAGATTCTCAAAAACATGGGTGAAATTTTGAAAGCTAGTGGAGCAAGCTATTCATCTGTTGTCAAAACGACAATTATGTTGGCAGACTTGAAAGACTTCAAGAAAGTAAATGATATATATGCTAAGTATTTTTCATCCACACCTCCAGCTCGATCAACTTACCAGGTTGCGGCATTGCCTCTTGATGCGAGAATTGAGATAGAGTGCATTGCTGCGCTGTAG

Protein sequence

MAWCAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVSTDAGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNMGEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIEIECIAAL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo00967.1	Spo00967.1	mRNA

Homology

[Close]

BLAST of Spo00967.1 vs. NCBI nr
Match: gi|902178193|gb|KNA09091.1| (hypothetical protein SOVF_156810 [Spinacia oleracea])

HSP 1 Score: 363.6 bits (932), Expect = 2.000e-97
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


		  
Query: 1   MAWCAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVSTD 60
           MAWCAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVSTD
Sbjct: 1   MAWCAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVSTD 60

Query: 61  AGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNM 120
           AGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNM
Sbjct: 61  AGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNM 120

Query: 121 GEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIE 180
           GEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIE
Sbjct: 121 GEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIE 180

Query: 181 IECIAAL 188
           IECIAAL
Sbjct: 181 IECIAAL 187

[Close]

BLAST of Spo00967.1 vs. NCBI nr
Match: gi|731329665|ref|XP_010675715.1| (PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 318.9 bits (816), Expect = 5.800e-84
Identity = 164/187 (87.70%), Postives = 173/187 (92.51%), Query Frame = 1


		  
Query: 1   MAWCAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVSTD 60
           MAWCAARSF LPAID  ALRVKGQIAAGVGCVSFAG+N WRS       KPFAC A+STD
Sbjct: 1   MAWCAARSFHLPAIDAGALRVKGQIAAGVGCVSFAGTNIWRS-------KPFACLAISTD 60

Query: 61  AGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNM 120
           A LKE V+TDKAPAALGPYSQAIKANNM+FVSGVLGLVPETGKFVSE+VE+QTEQ+LKNM
Sbjct: 61  ASLKEAVKTDKAPAALGPYSQAIKANNMVFVSGVLGLVPETGKFVSENVEEQTEQVLKNM 120

Query: 121 GEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIE 180
           GEILKASGA+YSSVVKTTIMLADLKDFKKVN+IYAKYFSSTPPARSTYQVAALPLDARIE
Sbjct: 121 GEILKASGANYSSVVKTTIMLADLKDFKKVNEIYAKYFSSTPPARSTYQVAALPLDARIE 180

Query: 181 IECIAAL 188
           IECIAAL
Sbjct: 181 IECIAAL 180

[Close]

BLAST of Spo00967.1 vs. NCBI nr
Match: gi|1009110922|ref|XP_015898337.1| (PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 290.4 bits (742), Expect = 2.200e-75
Identity = 146/187 (78.07%), Postives = 161/187 (86.10%), Query Frame = 1


		  
Query: 1   MAWCAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVSTD 60
           MAWCAAR+F +PAID  ALR +  +A GVG  S AGSN WRS SS  RS PFAC  +STD
Sbjct: 1   MAWCAARTFNVPAIDVGALRTRAPLAVGVGFASVAGSNIWRSSSSMKRSAPFACLGISTD 60

Query: 61  AGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNM 120
             +KE V+TDKAPAALGPYSQAIKANN L+VSGVLGL+PETGKFVS++VEDQTEQ+LKNM
Sbjct: 61  TRIKEAVKTDKAPAALGPYSQAIKANNFLYVSGVLGLIPETGKFVSDNVEDQTEQVLKNM 120

Query: 121 GEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIE 180
           GEILKA GA YSSVVKTTIMLADLKDFKKVN+IYAKYF S  PARSTYQVAALPLDA+IE
Sbjct: 121 GEILKAGGAGYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYQVAALPLDAKIE 180

Query: 181 IECIAAL 188
           IECIA+L
Sbjct: 181 IECIASL 187

[Close]

BLAST of Spo00967.1 vs. NCBI nr
Match: gi|351725031|ref|NP_001237846.1| (uncharacterized protein LOC100527559 [Glycine max])

HSP 1 Score: 288.1 bits (736), Expect = 1.100e-74
Identity = 143/186 (76.88%), Postives = 165/186 (88.71%), Query Frame = 1


		  
Query: 2   AWCAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVSTDA 61
           +WC ARSFQ+PA++ SALR +  +AAGVGC+S AG++FWRS SS  RS PF C ++S+D 
Sbjct: 3   SWCGARSFQIPAMEDSALRNRASLAAGVGCLSVAGTSFWRSSSSPKRSLPFTCLSISSDT 62

Query: 62  GLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNMG 121
            +KE VQT+ APAALGPYSQAIK+NN++FVSGVLGLVPETGKFVS+DVEDQTEQ+LKNMG
Sbjct: 63  RIKESVQTEGAPAALGPYSQAIKSNNLIFVSGVLGLVPETGKFVSDDVEDQTEQLLKNMG 122

Query: 122 EILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIEI 181
           EILKA GASYSSVVKTTIMLADLKDFKKVN+IYAKYF S  PARSTYQVAALPLDA+IEI
Sbjct: 123 EILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPFPARSTYQVAALPLDAKIEI 182

Query: 182 ECIAAL 188
           ECIA +
Sbjct: 183 ECIATI 188

[Close]

BLAST of Spo00967.1 vs. NCBI nr
Match: gi|225460977|ref|XP_002280251.1| (PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Vitis vinifera])

HSP 1 Score: 287.7 bits (735), Expect = 1.400e-74
Identity = 145/188 (77.13%), Postives = 166/188 (88.30%), Query Frame = 1


		  
Query: 1   MAW-CAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVST 60
           MAW  AAR+F +PAID  ALR +G +A G+GC S A ++ WRS SS+ RSKP AC ++ST
Sbjct: 4   MAWSAAARTFNMPAIDVGALRRRGPLAVGIGCASVATTSLWRSSSSSLRSKPLACLSIST 63

Query: 61  DAGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKN 120
           D  +K+ VQTDKAPAALGPYSQAIKANN++FVSGVLGL+PETGKF+S++VEDQTEQ+LKN
Sbjct: 64  DTSIKQAVQTDKAPAALGPYSQAIKANNLVFVSGVLGLIPETGKFISDNVEDQTEQVLKN 123

Query: 121 MGEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARI 180
           MGEILKASGASYSSVVKTTIMLADLKDFKKVN+IYAKYF +  PARSTYQVAALPLDARI
Sbjct: 124 MGEILKASGASYSSVVKTTIMLADLKDFKKVNEIYAKYFHAPAPARSTYQVAALPLDARI 183

Query: 181 EIECIAAL 188
           EIECIAAL
Sbjct: 184 EIECIAAL 191

[Close]

BLAST of Spo00967.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRD6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_156810 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.400e-97
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


		  
Query: 1   MAWCAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVSTD 60
           MAWCAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVSTD
Sbjct: 1   MAWCAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVSTD 60

Query: 61  AGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNM 120
           AGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNM
Sbjct: 61  AGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNM 120

Query: 121 GEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIE 180
           GEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIE
Sbjct: 121 GEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIE 180

Query: 181 IECIAAL 188
           IECIAAL
Sbjct: 181 IECIAAL 187

[Close]

BLAST of Spo00967.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CG43_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g088360 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.000e-84
Identity = 164/187 (87.70%), Postives = 173/187 (92.51%), Query Frame = 1


		  
Query: 1   MAWCAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVSTD 60
           MAWCAARSF LPAID  ALRVKGQIAAGVGCVSFAG+N WRS       KPFAC A+STD
Sbjct: 1   MAWCAARSFHLPAIDAGALRVKGQIAAGVGCVSFAGTNIWRS-------KPFACLAISTD 60

Query: 61  AGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNM 120
           A LKE V+TDKAPAALGPYSQAIKANNM+FVSGVLGLVPETGKFVSE+VE+QTEQ+LKNM
Sbjct: 61  ASLKEAVKTDKAPAALGPYSQAIKANNMVFVSGVLGLVPETGKFVSENVEEQTEQVLKNM 120

Query: 121 GEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIE 180
           GEILKASGA+YSSVVKTTIMLADLKDFKKVN+IYAKYFSSTPPARSTYQVAALPLDARIE
Sbjct: 121 GEILKASGANYSSVVKTTIMLADLKDFKKVNEIYAKYFSSTPPARSTYQVAALPLDARIE 180

Query: 181 IECIAAL 188
           IECIAAL
Sbjct: 181 IECIAAL 180

[Close]

BLAST of Spo00967.1 vs. UniProtKB/TrEMBL
Match: C6T4P6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G291100 PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 7.600e-75
Identity = 143/186 (76.88%), Postives = 165/186 (88.71%), Query Frame = 1


		  
Query: 2   AWCAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVSTDA 61
           +WC ARSFQ+PA++ SALR +  +AAGVGC+S AG++FWRS SS  RS PF C ++S+D 
Sbjct: 3   SWCGARSFQIPAMEDSALRNRASLAAGVGCLSVAGTSFWRSSSSPKRSLPFTCLSISSDT 62

Query: 62  GLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNMG 121
            +KE VQT+ APAALGPYSQAIK+NN++FVSGVLGLVPETGKFVS+DVEDQTEQ+LKNMG
Sbjct: 63  RIKESVQTEGAPAALGPYSQAIKSNNLIFVSGVLGLVPETGKFVSDDVEDQTEQLLKNMG 122

Query: 122 EILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIEI 181
           EILKA GASYSSVVKTTIMLADLKDFKKVN+IYAKYF S  PARSTYQVAALPLDA+IEI
Sbjct: 123 EILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPFPARSTYQVAALPLDAKIEI 182

Query: 182 ECIAAL 188
           ECIA +
Sbjct: 183 ECIATI 188

[Close]

BLAST of Spo00967.1 vs. UniProtKB/TrEMBL
Match: D7T8C3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00390 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 9.900e-75
Identity = 145/188 (77.13%), Postives = 166/188 (88.30%), Query Frame = 1


		  
Query: 1   MAW-CAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVST 60
           MAW  AAR+F +PAID  ALR +G +A G+GC S A ++ WRS SS+ RSKP AC ++ST
Sbjct: 1   MAWSAAARTFNMPAIDVGALRRRGPLAVGIGCASVATTSLWRSSSSSLRSKPLACLSIST 60

Query: 61  DAGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKN 120
           D  +K+ VQTDKAPAALGPYSQAIKANN++FVSGVLGL+PETGKF+S++VEDQTEQ+LKN
Sbjct: 61  DTSIKQAVQTDKAPAALGPYSQAIKANNLVFVSGVLGLIPETGKFISDNVEDQTEQVLKN 120

Query: 121 MGEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARI 180
           MGEILKASGASYSSVVKTTIMLADLKDFKKVN+IYAKYF +  PARSTYQVAALPLDARI
Sbjct: 121 MGEILKASGASYSSVVKTTIMLADLKDFKKVNEIYAKYFHAPAPARSTYQVAALPLDARI 180

Query: 181 EIECIAAL 188
           EIECIAAL
Sbjct: 181 EIECIAAL 188

[Close]

BLAST of Spo00967.1 vs. UniProtKB/TrEMBL
Match: A0A0L9UUU4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g021700 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.100e-73
Identity = 143/186 (76.88%), Postives = 164/186 (88.17%), Query Frame = 1


		  
Query: 2   AWCAARSFQLPAIDGSALRVKGQIAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAVSTDA 61
           +WC+ RSFQ+PA++  ALR    +AAGVGC+S AG++FWRS  S +RS PF C ++S+DA
Sbjct: 3   SWCSVRSFQIPAMERGALRNSASLAAGVGCLSVAGTSFWRSSLSRNRSLPFTCLSISSDA 62

Query: 62  GLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNMG 121
            +KE VQTD APAALGPYSQAIKA+N+LFVSGVLGLVPETGKFVS+DVE+QTEQ+LKNMG
Sbjct: 63  RVKESVQTDGAPAALGPYSQAIKADNLLFVSGVLGLVPETGKFVSDDVEEQTEQLLKNMG 122

Query: 122 EILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIEI 181
           EILKA GASYSSVVKTTIMLADLKDFKKVN+IYAKYF S  PARSTYQVAALPLDA+IEI
Sbjct: 123 EILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPFPARSTYQVAALPLDAKIEI 182

Query: 182 ECIAAL 188
           ECIA L
Sbjct: 183 ECIATL 188

[Close]

BLAST of Spo00967.1 vs. ExPASy Swiss-Prot
Match: RIDA_ARATH (Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana GN=RIDA PE=1 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.500e-63
Identity = 132/190 (69.47%), Postives = 151/190 (79.47%), Query Frame = 1


		  
Query: 1   MAWCAARSFQLPAID-GSALRVKGQ--IAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAV 60
           M W   RS   P +D  +ALR      +AAGVGC +FAG + +R    +SRS PFA  +V
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRM---SSRSPPFASLSV 60

Query: 61  STDAGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQIL 120
           S  +  KEVV T+KAPAALGPYSQAIKANN++F+SGVLGL+PETGKFVSE VEDQTEQ+L
Sbjct: 61  SASSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVL 120

Query: 121 KNMGEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDA 180
           KNMGEILKASGA YSSVVKTTIMLADL DFK VN+IYAKYF +  PARSTYQVAALPL+A
Sbjct: 121 KNMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNA 180

Query: 181 RIEIECIAAL 188
           +IEIECIA L
Sbjct: 181 KIEIECIATL 187

[Close]

BLAST of Spo00967.1 vs. ExPASy Swiss-Prot
Match: UK114_HUMAN (Ribonuclease UK114 OS=Homo sapiens GN=HRSP12 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.000e-32
Identity = 65/123 (52.85%), Postives = 93/123 (75.61%), Query Frame = 1


		  
Query: 63  LKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNMGE 122
           ++ V+ T KAP A+GPYSQA+  +  +++SG +G+ P +G+ VS  V ++ +Q LKNMGE
Sbjct: 5   IRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGE 64

Query: 123 ILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIEIE 182
           ILKA+G  +++VVKTT++LAD+ DF  VN+IY +YF S  PAR+ YQVAALP  +RIEIE
Sbjct: 65  ILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIEIE 124

Query: 183 CIA 186
            +A
Sbjct: 125 AVA 127

[Close]

BLAST of Spo00967.1 vs. ExPASy Swiss-Prot
Match: UK114_MOUSE (Ribonuclease UK114 OS=Mus musculus GN=Hrsp12 PE=1 SV=3)

HSP 1 Score: 139.4 bits (350), Expect = 3.900e-32
Identity = 64/123 (52.03%), Postives = 94/123 (76.42%), Query Frame = 1


		  
Query: 63  LKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNMGE 122
           +++V+ T KAPAA+GPYSQA++ +  +++SG +GL P +G+ V   V ++ +Q LKN+GE
Sbjct: 5   IRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGE 64

Query: 123 ILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIEIE 182
           ILKA+G  +++VVKTT++LAD+ DF  VN+IY  YF  + PAR+ YQVAALP  +R+EIE
Sbjct: 65  ILKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQGSLPARAAYQVAALPRGSRVEIE 124

Query: 183 CIA 186
            IA
Sbjct: 125 AIA 127

[Close]

BLAST of Spo00967.1 vs. ExPASy Swiss-Prot
Match: UK114_BOVIN (Ribonuclease UK114 OS=Bos taurus GN=HRSP12 PE=2 SV=3)

HSP 1 Score: 136.3 bits (342), Expect = 3.300e-31
Identity = 62/123 (50.41%), Postives = 92/123 (74.80%), Query Frame = 1


		  
Query: 63  LKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNMGE 122
           +++++ T KAPAA+GPYSQA+  +  +++SG LG+ P +G+ V   V ++ +Q L N+GE
Sbjct: 5   VRKIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVAEEAKQALTNIGE 64

Query: 123 ILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIEIE 182
           ILKA+G  +++VVK T++LAD+ DF  VND+Y +YF S+ PAR+ YQVAALP   R+EIE
Sbjct: 65  ILKAAGCDFTNVVKATVLLADINDFSTVNDVYKQYFQSSFPARAAYQVAALPKGGRVEIE 124

Query: 183 CIA 186
            IA
Sbjct: 125 AIA 127

[Close]

BLAST of Spo00967.1 vs. ExPASy Swiss-Prot
Match: UK114_RAT (Ribonuclease UK114 OS=Rattus norvegicus GN=Hrsp12 PE=1 SV=3)

HSP 1 Score: 136.0 bits (341), Expect = 4.300e-31
Identity = 64/123 (52.03%), Postives = 91/123 (73.98%), Query Frame = 1


		  
Query: 63  LKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQILKNMGE 122
           +++V+ T KAPAA+G YSQA+  +  ++VSG +G+ P +G+ V   V ++ +Q LKN+GE
Sbjct: 5   IRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGE 64

Query: 123 ILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDARIEIE 182
           ILKA+G  +++VVKTT++LAD+ DF  VN+IY  YF    PAR+ YQVAALP  +RIEIE
Sbjct: 65  ILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKGSRIEIE 124

Query: 183 CIA 186
            IA
Sbjct: 125 AIA 127

[Close]

BLAST of Spo00967.1 vs. TAIR (Arabidopsis)
Match: AT3G20390.1 (endoribonuclease L-PSP family protein)

HSP 1 Score: 243.0 bits (619), Expect = 1.400e-64
Identity = 132/190 (69.47%), Postives = 151/190 (79.47%), Query Frame = 1


		  
Query: 1   MAWCAARSFQLPAID-GSALRVKGQ--IAAGVGCVSFAGSNFWRSPSSTSRSKPFACRAV 60
           M W   RS   P +D  +ALR      +AAGVGC +FAG + +R    +SRS PFA  +V
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRM---SSRSPPFASLSV 60

Query: 61  STDAGLKEVVQTDKAPAALGPYSQAIKANNMLFVSGVLGLVPETGKFVSEDVEDQTEQIL 120
           S  +  KEVV T+KAPAALGPYSQAIKANN++F+SGVLGL+PETGKFVSE VEDQTEQ+L
Sbjct: 61  SASSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVL 120

Query: 121 KNMGEILKASGASYSSVVKTTIMLADLKDFKKVNDIYAKYFSSTPPARSTYQVAALPLDA 180
           KNMGEILKASGA YSSVVKTTIMLADL DFK VN+IYAKYF +  PARSTYQVAALPL+A
Sbjct: 121 KNMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNA 180

Query: 181 RIEIECIAAL 188
           +IEIECIA L
Sbjct: 181 KIEIECIATL 187

The following BLAST results are available for this feature:

BLAST of Spo00967.1 vs. NCBI nr
BLAST of Spo00967.1 vs. UniProtKB/TrEMBL
BLAST of Spo00967.1 vs. ExPASy Swiss-Prot
BLAST of Spo00967.1 vs. TAIR (Arabidopsis)

BLAST of Spo00967.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902178193\|gb\|KNA09091.1\|	2.0e-97	100.	hypothetical protein SOVF_1568...	[more]
gi\|731329665\|ref\|XP_010675715.1\|	5.8e-84	87.7	PREDICTED: reactive Intermedia...	[more]
gi\|1009110922\|ref\|XP_015898337.1\|	2.2e-75	78.0	PREDICTED: reactive Intermedia...	[more]
gi\|351725031\|ref\|NP_001237846.1\|	1.1e-74	76.8	uncharacterized protein LOC100...	[more]
gi\|225460977\|ref\|XP_002280251.1\|	1.4e-74	77.1	PREDICTED: reactive Intermedia...	[more]

BLAST of Spo00967.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QRD6_SPIOL	1.4e-97	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CG43_BETVU	4.0e-84	87.7	Uncharacterized protein OS=Bet...	[more]
C6T4P6_SOYBN	7.6e-75	76.8	Uncharacterized protein OS=Gly...	[more]
D7T8C3_VITVI	9.9e-75	77.1	Putative uncharacterized prote...	[more]
A0A0L9UUU4_PHAAN	1.1e-73	76.8	Uncharacterized protein OS=Pha...	[more]

BLAST of Spo00967.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RIDA_ARATH	2.5e-63	69.4	Reactive Intermediate Deaminas...	[more]
UK114_HUMAN	1.0e-32	52.8	Ribonuclease UK114 OS=Homo sap...	[more]
UK114_MOUSE	3.9e-32	52.0	Ribonuclease UK114 OS=Mus musc...	[more]
UK114_BOVIN	3.3e-31	50.4	Ribonuclease UK114 OS=Bos taur...	[more]
UK114_RAT	4.3e-31	52.0	Ribonuclease UK114 OS=Rattus n...	[more]

BLAST of Spo00967.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G20390.1	1.4e-64	69.4	endoribonuclease L-PSP family ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006056	RidA family	TIGRFAMs	TIGR00004	TIGR00004	coord: 64..186 score: 2.2
IPR006175	YjgF/YER057c/UK114 family	PANTHER	PTHR11803	TRANSLATION INITIATION INHIBITOR	coord: 39..187 score: 3.9
IPR006175	YjgF/YER057c/UK114 family	PFAM	PF01042	Ribonuc_L-PSP	coord: 70..186 score: 1.6
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	GENE3D	3.30.1330.40		coord: 63..187 score: 8.3
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	unknown	SSF55298	YjgF-like	coord: 63..187 score: 1.05
IPR019897	RidA, conserved site	PROSITE	PS01094	UPF0076	coord: 163..181 scor
None	No IPR available	PANTHER	PTHR11803:SF13	RIBONUCLEASE UK114	coord: 39..187 score: 3.9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005773	vacuole
molecular_function	GO:0019239	deaminase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo19731	0.75	Barchart \| Table
Spo23413	0.72	Barchart \| Table