Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCATGCTTGTAAAATGCATAAACGAATGACTTTGGCACGATAACACCTTATCGGTGGTGTAAATAAGGTCTCAACAATCAAGGGGTGCCACGAAAAGAACCGACTACCCTTTTGGTGTTTAAGCATATGTATTTGGTTTGTTTTATAGTTTGTGTAATGGTCTATAAAGACCTCCTTACTTTGTTTAGTTTGTAGACTCTTTTCATTTATGCAAAATCAATCCTATGTCAAAAAAAAAAATATGATAATTTATTTTCTTACAATAAAAAATGACTTGATCGAGTTGGCCTACTAAAGAAAGGAAAAAAAAAAACATAAAACTAAAAGTTCCACACCAATGATCCAAAATGTGTAAGACAAATCCAATATCTCATTTATAAAATTTCCATACACCCCTTACAAATATTCCACAAAGGAAACTACACATACACCTCACTTCCACCACTCCCCCTTACAATAAAAAGACTAAACCACACAATTTCTACACCTTTCTTTTCTCTGCGAAGAAACACTCACCTCAAAATCCATGTTGGAGTTAACAGTAATTTCAGCTCAAGGACTCAAAAACTCCTCCCTCTTCACCCACCATCTTAAACCCTTCATCACCATCACCACCACCACTACCACCACCACCTTCCCTTCACCACCATCGCCGTCGTTGTCGCACGAGGGCGGCTCCACCAAGGGCTACCACAACTTCCATCATGTGTACTCAACAAGGGTAGATGATGAAGGAGGTTTTAACCCTACATGGGGTGATAAGTTCCATCTACCAATAGATCCTACATTCTTCACAAGTACTACTACTAACTACTCTTGTGTTTATCTCCAACTATACACAAAGCGGGCCTTATTGGGCCCTTTATTGATGGGCTGGATCCAGATAACTGCTTCTGATATATTTGATGGGCATTTTCCTCTTGGGTCAGCCCATCATTTGAGTTACCGGCTGAGGAAGAGAGACGGTTCAAGAGGGCATGGGGTTGTTAATGTTGTTTGTAAATTTGTAGGTGAAGTTCCGGTTATACGTCATCCTTGTTGGAGTCCAGGTGAAAGACGTTTGGCGGCTGTGGACACGTGTAAGACGGTGATTGGTACACCGGTGACGGCTTGGCCAATGAGAATGAAGGATAGAGATAAGATGGGTAATGTAACACGTACTAATGAGTAATGACTAATGACTACTCCGTAGTAGATAACTAGATAAGACAACGAGCAAGCATGTAATTGATTAACAACGCCACTTGACAAGGAAGGCTACGAAAATTTGTATATTACGGGTGTATCGTACGCTTATAATCGTTTGATTTGACATTTGTTTGATTTTAGCAAATTAAATTAAAGTTAACATACATATCATATTTTTAGTACTGTATGTATGTACTCTGTAGTACTTCCTCTGTTCTTATTTATATGATACAATTATTTAGTCACGTTTGCCAATGCACAATTTCGAATATTAATATTTACAATTATGGATAAGAAAAAATTATAAAAAGTTGATATTTAAAAAATATTTATTGAGACGAATCAAACAAGACCCCAC TCATGCTTGTAAAATGCATAAACGAATGACTTTGGCACGATAACACCTTATCGGTGGTGTAAATAAGGTCTCAACAATCAAGGGGTGCCACGAAAAGAACCGACTACCCTTTTGGTGTTTAAGCATATGTATTTGGTTTGTTTTATAGTTTGTGTAATGGTCTATAAAGACCTCCTTACTTTGTTTAGTTTGTAGACTCTTTTCATTTATGCAAAATCAATCCTATGTCAAAAAAAAAAATATGATAATTTATTTTCTTACAATAAAAAATGACTTGATCGAGTTGGCCTACTAAAGAAAGGAAAAAAAAAAACATAAAACTAAAAGTTCCACACCAATGATCCAAAATGTGTAAGACAAATCCAATATCTCATTTATAAAATTTCCATACACCCCTTACAAATATTCCACAAAGGAAACTACACATACACCTCACTTCCACCACTCCCCCTTACAATAAAAAGACTAAACCACACAATTTCTACACCTTTCTTTTCTCTGCGAAGAAACACTCACCTCAAAATCCATGTTGGAGTTAACAGTAATTTCAGCTCAAGGACTCAAAAACTCCTCCCTCTTCACCCACCATCTTAAACCCTTCATCACCATCACCACCACCACTACCACCACCACCTTCCCTTCACCACCATCGCCGTCGTTGTCGCACGAGGGCGGCTCCACCAAGGGCTACCACAACTTCCATCATGTGTACTCAACAAGGGTAGATGATGAAGGAGGTTTTAACCCTACATGGGGTGATAAGTTCCATCTACCAATAGATCCTACATTCTTCACAAGTGAAGTTCCGGTTATACGTCATCCTTGTTGGAGTCCAGGTGAAAGACGTTTGGCGGCTGTGGACACGTGTAAGACGGTGATTGGTACACCGGTGACGGCTTGGCCAATGAGAATGAAGGATAGAGATAAGATGGGTAATGTAACACGTACTAATGAGTAATGACTAATGACTACTCCGTAGTAGATAACTAGATAAGACAACGAGCAAGCATGTAATTGATTAACAACGCCACTTGACAAGGAAGGCTACGAAAATTTGTATATTACGGGTGTATCGTACGCTTATAATCGTTTGATTTGACATTTGTTTGATTTTAGCAAATTAAATTAAAGTTAACATACATATCATATTTTTAGTACTGTATGTATGTACTCTGTAGTACTTCCTCTGTTCTTATTTATATGATACAATTATTTAGTCACGTTTGCCAATGCACAATTTCGAATATTAATATTTACAATTATGGATAAGAAAAAATTATAAAAAGTTGATATTTAAAAAATATTTATTGAGACGAATCAAACAAGACCCCAC ATGTTGGAGTTAACAGTAATTTCAGCTCAAGGACTCAAAAACTCCTCCCTCTTCACCCACCATCTTAAACCCTTCATCACCATCACCACCACCACTACCACCACCACCTTCCCTTCACCACCATCGCCGTCGTTGTCGCACGAGGGCGGCTCCACCAAGGGCTACCACAACTTCCATCATGTGTACTCAACAAGGGTAGATGATGAAGGAGGTTTTAACCCTACATGGGGTGATAAGTTCCATCTACCAATAGATCCTACATTCTTCACAAGTGAAGTTCCGGTTATACGTCATCCTTGTTGGAGTCCAGGTGAAAGACGTTTGGCGGCTGTGGACACGTGTAAGACGGTGATTGGTACACCGGTGACGGCTTGGCCAATGAGAATGAAGGATAGAGATAAGATGGGTAATGTAACACGTACTAATGAGTAA MLELTVISAQGLKNSSLFTHHLKPFITITTTTTTTTFPSPPSPSLSHEGGSTKGYHNFHHVYSTRVDDEGGFNPTWGDKFHLPIDPTFFTSEVPVIRHPCWSPGERRLAAVDTCKTVIGTPVTAWPMRMKDRDKMGNVTRTNE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo00710.1 vs. NCBI nr
Match: gi|902131574|gb|KNA04286.1| (hypothetical protein SOVF_201150 [Spinacia oleracea]) HSP 1 Score: 191.4 bits (485), Expect = 1.100e-45 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1
BLAST of Spo00710.1 vs. NCBI nr
Match: gi|870860829|gb|KMT12137.1| (hypothetical protein BVRB_5g100890 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 109.0 bits (271), Expect = 7.000e-21 Identity = 63/95 (66.32%), Postives = 70/95 (73.68%), Query Frame = 1
BLAST of Spo00710.1 vs. NCBI nr
Match: gi|694386499|ref|XP_009369028.1| (PREDICTED: uncharacterized protein LOC103958488 [Pyrus x bretschneideri]) HSP 1 Score: 92.0 bits (227), Expect = 8.800e-16 Identity = 50/97 (51.55%), Postives = 62/97 (63.92%), Query Frame = 1
BLAST of Spo00710.1 vs. NCBI nr
Match: gi|703160516|ref|XP_010112552.1| (hypothetical protein L484_010557 [Morus notabilis]) HSP 1 Score: 91.3 bits (225), Expect = 1.500e-15 Identity = 60/146 (41.10%), Postives = 79/146 (54.11%), Query Frame = 1
BLAST of Spo00710.1 vs. NCBI nr
Match: gi|658040027|ref|XP_008355606.1| (PREDICTED: BON1-associated protein 1-like [Malus domestica]) HSP 1 Score: 89.4 bits (220), Expect = 5.700e-15 Identity = 49/97 (50.52%), Postives = 62/97 (63.92%), Query Frame = 1
BLAST of Spo00710.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCN1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_201150 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 7.400e-46 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1
BLAST of Spo00710.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CF29_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g100890 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 4.800e-21 Identity = 63/95 (66.32%), Postives = 70/95 (73.68%), Query Frame = 1
BLAST of Spo00710.1 vs. UniProtKB/TrEMBL
Match: W9SLC7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010557 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.000e-15 Identity = 60/146 (41.10%), Postives = 79/146 (54.11%), Query Frame = 1
BLAST of Spo00710.1 vs. UniProtKB/TrEMBL
Match: A0A067K105_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20640 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.500e-14 Identity = 49/92 (53.26%), Postives = 60/92 (65.22%), Query Frame = 1
BLAST of Spo00710.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QLP7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G160700 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.700e-14 Identity = 60/147 (40.82%), Postives = 76/147 (51.70%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo00710.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo00710.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo00710.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo00710.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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