Spo00566 (gene)

Overview
NameSpo00566
Typegene
OrganismSpinacia oleracea (Spinach)
Description60s acidic ribosomal protein-like protein
LocationSpoScf_02641 : 50350 .. 52783 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTACTTAACTATACAACGGGTACAATTCCTACATTTGTTCCGAGCTTCAATCCGGAATGAAACTGCAAAGTGGGGTTGTAGAGGGAATGGGACTGTACTTTCCTATTCTCAAAGGAGTAAACTAGACCACCTAAACTTATGGAGTATTACATAACTAATTAACATGAAAATAAAGCCTTGGCAGTTGGCCCTGTTGTGTCAGGGAAAAGGAAGTGTCTTAATGAAGAACGACTGAGGATTCTTTCTTGCATTAGATGCCAAATATAGCTTAACCCGTGTTCCTTTGCGTTGGTCTATGTGTTTTTGTTTAAGCCTGGTGATATTACTGCTGTATTGATTATCCTGTAACTTAACTTTGTATTTGTTCAATTGCAGTGGGTGTTGAGCCTGATGAGGCCAGACTTCAGTTGTTCTTTGACCAGGTTTCTGGTAAAGACATCACAGAACTAGTTGCTGCTGGAAGAGAAAAGCTTGCCTCTGTCCCTGCTGGTGGAGGTGCAGTTGCCGTGTCAGCTGCTCCTTCAGGTGGTGCAGGTGCTGCTGCCGCAGAGGCTCCAAAGGAGGAGAAGAAGGTTGAAGAGAAAGAAGAGTCAGATGACGTAAGAACAACTCTATATCATCCTCTAAATTGTGTTTGTGTTGAGTTTTTTTTAGCTACTGAAGAGTGTTATCGTACTTTGCTCACACTTGAAATTTTTTGTTGCAGGATATGGGTTTCAGTCTCTTTGACTAAGTGGGAAGGAGCTGATGTTTACAGCAAGTCTTTGCATTTTAAATATAGCTCAAGTTTTGTTTGCTATTTGGAAATGTTCTAGATTTATTTTGAGATTTTAAGTTTCTTTTTAGCTAATCAGTGACTGAGGCATTGGCAGACAATTAGTTATATTGAATTATGTGTTAAAATGCATAATTGCATCTTGTTTTAACCTCAAGTCCTTTTTTCATGAATCCTTCTTAATGGATAAAATCAGATTTATTTACAAGATGATGGGTGCTTGATCATTTCAAGTGTTTTGTTTTACTAGTTATGAACAATCAATAGTCCTGCATATCGTATCGTTTCTACCTGTGTAAACTAGACTTTTACAATGCTGCAAATTTGTGAAAATGAAATTTATATTTGTTTGGAGAGAAAGGAGTGTGAACAATGTATGTGTATAGTAAACGAATTTTATTTGTGGAGAATGGAGTACGAACAACGTATNGGATAAAATCAGATTTATTTACAAGATGATGGGTGCTTGATCATTTCAAGTGTTTTGTTTTACTAGTTATGAACAATCAATAGTCCTGCATATCGTTTCTACCTGTGTAAACTAGCCTTTTACAATGCTGCAAATTTGTGAAAATGAAGTTTATATTTGTTTGGAGAGAAAGGAGTGTGAACAATGTATGTGTATAGTAAACGAATTTTATTTGTGGAGAATGGAGTACGAACAACGTATGTGCCTAATAAACGAATTTTGTTCGTAGACTCTGTGAAATAATCAGGAACCATTTGTCAAATCTGAATAAATACAAGGACCAACGTGACAGGCCTGATCTGACAGCTCCAGAAAGCTTGCAATTGTATCTCTGACACGAGGTTTGAGCAACTAAAGATTGCCACTGAACTTGAATTTTGGCAAGCAATTTTCTGTTGCAAAGAGGTTTTGTAGCTACCAATCTCTTTAAGAATTATATGCCTCCTTTCTGACTCACGATTTCATGTGGTTAATGTTAAACATGCACATTTGCTGGTCCCTTTAAGCCTTGATGTAAATTTAGAGGTTTTAAAAAAATCATGTTGGCTTCTGTACAACATTATTTTTACATAAAAACAAAACTTCTGCAATTTTGACTCATGTTTGGTGGTTTTATAAATTCATGAATGTCATTGCCATGTTTTCCAGATCAGTAATTAATGATTTCTGGGTATCATCAACATTAGACCACTGCCTCTGTTGGGGCTGGTACCAAGGGTTAGGCAACAGAGGTTCAGATGTATGCAAGAATGCAACTTTAGCCCTGCCATAATGGAGAAATTTGTGTTTATTAGGTCATTGAGCGAACTAGAATTACAATTTTGTACTTCACAATGAACAAGAAATGCATACAGTTTTATGCTGTGTTTGGGAATTCGATTAGTGGAGAAATACGTGGAAAATCAAAACTATGGAAATATGTGGAAATGCAAAATTTAAGAAATGTACTACTCCCTAGTTTACACTTGCNCTCCTTCAGGTGGTGCAGGTGCTGCTGCCGCAGAGGCTCCAAAGGAGGAGAAGAAGGTTGAAGAGAAAGAAGAGTCAGATGACGTAAGAACAACTCTATATCATCCTCTAAATTGTGTTTGTGTTCAGTTTTTTTTAGCTACTGAAGAGTGTTATCGTACTTTGCTCACACTTGAAATTTTTTGTTGCAGGATATGGGTTTCAGTCTCTTTGACTAA

mRNA sequence

ATGTTACTTAACTATACAACGGTGGGTGTTGAGCCTGATGAGGCCAGACTTCAGTTGTTCTTTGACCAGGTTTCTGGTAAAGACATCACAGAACTAGTTGCTGCTGGAAGAGAAAAGCTTGCCTCTGTCCCTGCTGGTGGAGGTGCAGTTGCCGTGTCAGCTGCTCCTTCAGGTGGTGCAGGTGCTGCTGCCGCAGAGGCTCCAAAGGAGGAGAAGAAGGTTGAAGAGAAAGAAGAGTCAGATGACGATATGGGTTTCAGTCTCTTTGACTAA

Coding sequence (CDS)

ATGTTACTTAACTATACAACGGTGGGTGTTGAGCCTGATGAGGCCAGACTTCAGTTGTTCTTTGACCAGGTTTCTGGTAAAGACATCACAGAACTAGTTGCTGCTGGAAGAGAAAAGCTTGCCTCTGTCCCTGCTGGTGGAGGTGCAGTTGCCGTGTCAGCTGCTCCTTCAGGTGGTGCAGGTGCTGCTGCCGCAGAGGCTCCAAAGGAGGAGAAGAAGGTTGAAGAGAAAGAAGAGTCAGATGACGATATGGGTTTCAGTCTCTTTGACTAA

Protein sequence

MLLNYTTVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAEAPKEEKKVEEKEESDDDMGFSLFD
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00566.1Spo00566.1mRNA


Homology
[Close]
BLAST of Spo00566.1 vs. NCBI nr
Match: gi|902057439|gb|KNA02883.1| (hypothetical protein SOVF_214410, partial [Spinacia oleracea])

HSP 1 Score: 148.7 bits (374), Expect = 5.000e-33
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

		  

Query: 9  GVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAEAP 68
          GVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAEAP
Sbjct: 1  GVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAEAP 60

Query: 69 KEEKKVEEKEESDDDMGFSLFD 91
          KEEKKVEEKEESDDDMGFSLFD
Sbjct: 61 KEEKKVEEKEESDDDMGFSLFD 82
[Close]
BLAST of Spo00566.1 vs. NCBI nr
Match: gi|731349570|ref|XP_010686061.1| (PREDICTED: 60S acidic ribosomal protein P2A-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 115.2 bits (287), Expect = 6.100e-23
Identity = 65/86 (75.58%), Postives = 77/86 (89.53%), Query Frame = 1 

		  

Query: 6   TTVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAP-SGGAGAAA 65
           ++VG+E DE RL+LFF++VSGKD+ EL+AAGREKLA+VP+GGG VA +AAP +GG  AAA
Sbjct: 28  SSVGIEADEDRLKLFFNEVSGKDLAELIAAGREKLATVPSGGGGVAAAAAPGAGGGAAAA 87

Query: 66  AEAPKEEKKVEEKEESDDDMGFSLFD 91
           AEAPKEE KVEEKEESDDDMGFSLFD
Sbjct: 88  AEAPKEE-KVEEKEESDDDMGFSLFD 112
[Close]
BLAST of Spo00566.1 vs. NCBI nr
Match: gi|460391403|ref|XP_004241310.1| (PREDICTED: 60S acidic ribosomal protein P2 [Solanum lycopersicum])

HSP 1 Score: 113.6 bits (283), Expect = 1.800e-22
Identity = 63/84 (75.00%), Postives = 67/84 (79.76%), Query Frame = 1 

		  

Query: 7   TVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAE 66
           +VG E D+ R+QL   QV GKDITEL+AAGREKLASVPAGGGA    AAP GG  A AAE
Sbjct: 29  SVGAEADDDRIQLLLSQVEGKDITELIAAGREKLASVPAGGGAACAVAAPGGGGAAPAAE 88

Query: 67  APKEEKKVEEKEESDDDMGFSLFD 91
             KEEKKVEEKEESDDDMGFSLFD
Sbjct: 89  EKKEEKKVEEKEESDDDMGFSLFD 112
[Close]
BLAST of Spo00566.1 vs. NCBI nr
Match: gi|970037816|ref|XP_015080240.1| (PREDICTED: 60S acidic ribosomal protein P2-like [Solanum pennellii])

HSP 1 Score: 110.9 bits (276), Expect = 1.200e-21
Identity = 64/85 (75.29%), Postives = 68/85 (80.00%), Query Frame = 1 

		  

Query: 7   TVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAA-AA 66
           +VG E D+ R+QL   QV GKDITEL+AAGREKLASVPAGGGA    AAP GG  AA AA
Sbjct: 29  SVGAEADDDRIQLLLSQVEGKDITELIAAGREKLASVPAGGGAACAVAAPGGGGAAAPAA 88

Query: 67  EAPKEEKKVEEKEESDDDMGFSLFD 91
           E  KEEKKVEEKEESDDDMGFSLFD
Sbjct: 89  EEKKEEKKVEEKEESDDDMGFSLFD 113
[Close]
BLAST of Spo00566.1 vs. NCBI nr
Match: gi|747062724|ref|XP_011077887.1| (PREDICTED: 60S acidic ribosomal protein P2B-like [Sesamum indicum])

HSP 1 Score: 110.2 bits (274), Expect = 2.000e-21
Identity = 63/86 (73.26%), Postives = 72/86 (83.72%), Query Frame = 1 

		  

Query: 7   TVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAA--A 66
           +VG E D+ R++L   QV GKDITEL+AAGREKLASVPAGGGAVAV+A  +GG GAA  A
Sbjct: 29  SVGAEADDDRIELLLTQVKGKDITELIAAGREKLASVPAGGGAVAVAAPAAGGGGAAAPA 88

Query: 67  AEAPKEEKKVEEKEESDDDMGFSLFD 91
           A  PK+E+KVEEKEESDDDMGFSLFD
Sbjct: 89  AAEPKKEEKVEEKEESDDDMGFSLFD 114
[Close]
BLAST of Spo00566.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q845_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_214410 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.500e-33
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

		  

Query: 9  GVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAEAP 68
          GVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAEAP
Sbjct: 1  GVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAEAP 60

Query: 69 KEEKKVEEKEESDDDMGFSLFD 91
          KEEKKVEEKEESDDDMGFSLFD
Sbjct: 61 KEEKKVEEKEESDDDMGFSLFD 82
[Close]
BLAST of Spo00566.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ER63_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g176440 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.300e-23
Identity = 65/86 (75.58%), Postives = 77/86 (89.53%), Query Frame = 1 

		  

Query: 6   TTVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAP-SGGAGAAA 65
           ++VG+E DE RL+LFF++VSGKD+ EL+AAGREKLA+VP+GGG VA +AAP +GG  AAA
Sbjct: 28  SSVGIEADEDRLKLFFNEVSGKDLAELIAAGREKLATVPSGGGGVAAAAAPGAGGGAAAA 87

Query: 66  AEAPKEEKKVEEKEESDDDMGFSLFD 91
           AEAPKEE KVEEKEESDDDMGFSLFD
Sbjct: 88  AEAPKEE-KVEEKEESDDDMGFSLFD 112
[Close]
BLAST of Spo00566.1 vs. UniProtKB/TrEMBL
Match: K4C9G1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.200e-22
Identity = 63/84 (75.00%), Postives = 67/84 (79.76%), Query Frame = 1 

		  

Query: 7   TVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAE 66
           +VG E D+ R+QL   QV GKDITEL+AAGREKLASVPAGGGA    AAP GG  A AAE
Sbjct: 72  SVGAEADDDRIQLLLSQVEGKDITELIAAGREKLASVPAGGGAACAVAAPGGGGAAPAAE 131

Query: 67  APKEEKKVEEKEESDDDMGFSLFD 91
             KEEKKVEEKEESDDDMGFSLFD
Sbjct: 132 EKKEEKKVEEKEESDDDMGFSLFD 155
[Close]
BLAST of Spo00566.1 vs. UniProtKB/TrEMBL
Match: W9QTA2_9ROSA (60S acidic ribosomal protein P2B OS=Morus notabilis GN=L484_009000 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.400e-21
Identity = 67/91 (73.63%), Postives = 76/91 (83.52%), Query Frame = 1 

		  

Query: 6   TTVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAG---- 65
           ++VGVEPDE R+QL   +V GKDITEL+A+GREKLASVP+GGGAVA S AP+GGAG    
Sbjct: 28  SSVGVEPDEGRIQLLLTEVKGKDITELIASGREKLASVPSGGGAVAYS-APAGGAGGGAD 87

Query: 66  --AAAAEAPKEEKKVEEKEESDDDMGFSLFD 91
             AAAAE+ KEE KVEEKEESDDDMGFSLFD
Sbjct: 88  APAAAAESKKEE-KVEEKEESDDDMGFSLFD 116
[Close]
BLAST of Spo00566.1 vs. UniProtKB/TrEMBL
Match: M1AAF6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400007119 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.300e-21
Identity = 63/87 (72.41%), Postives = 67/87 (77.01%), Query Frame = 1 

		  

Query: 5   YTTVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAA- 64
           +  VG E D+ R+QL   QV GKDITEL+AAGREKLASVPAGGGA    AAP GG  AA 
Sbjct: 37  HAAVGAEADDDRIQLLLSQVKGKDITELIAAGREKLASVPAGGGAACAVAAPGGGGAAAP 96

Query: 65  AAEAPKEEKKVEEKEESDDDMGFSLFD 91
           AA   KEEKKVEEKEESDDDMGFSLFD
Sbjct: 97  AAAEKKEEKKVEEKEESDDDMGFSLFD 123
[Close]
BLAST of Spo00566.1 vs. ExPASy Swiss-Prot
Match: RLA2A_MAIZE (60S acidic ribosomal protein P2A OS=Zea mays GN=RPP2A PE=1 SV=3)

HSP 1 Score: 100.5 bits (249), Expect = 9.700e-21
Identity = 56/84 (66.67%), Postives = 65/84 (77.38%), Query Frame = 1 

		  

Query: 7   TVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAE 66
           +VG E D  +++L   Q+SGKDITEL+AAGREK ASVP GGG VAV+AA     GAA A 
Sbjct: 29  SVGCEVDNEKMELLLSQLSGKDITELIAAGREKFASVPCGGGGVAVAAAAPAAGGAAPAA 88

Query: 67  APKEEKKVEEKEESDDDMGFSLFD 91
             K+E+KVEEKEESDDDMGFSLFD
Sbjct: 89  EAKKEEKVEEKEESDDDMGFSLFD 112
[Close]
BLAST of Spo00566.1 vs. ExPASy Swiss-Prot
Match: RLA24_ARATH (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana GN=RPP2D PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.800e-20
Identity = 57/83 (68.67%), Postives = 66/83 (79.52%), Query Frame = 1 

		  

Query: 8   VGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAEA 67
           VG + D   ++L   +VSGKDI EL+A+GREKLASVP+GGG VAVSAAPS G G AAA A
Sbjct: 30  VGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGG-VAVSAAPSSGGGGAAAPA 89

Query: 68  PKEEKKVEEKEESDDDMGFSLFD 91
            K+E K EEKEESDDDMGFSLF+
Sbjct: 90  EKKEAKKEEKEESDDDMGFSLFE 111
[Close]
BLAST of Spo00566.1 vs. ExPASy Swiss-Prot
Match: RLA22_ARATH (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana GN=RPP2B PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.000e-18
Identity = 56/88 (63.64%), Postives = 72/88 (81.82%), Query Frame = 1 

		  

Query: 7   TVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPA-GGGAVAVSAAPS---GGAGA 66
           +VG E ++++++L   +V GKD+ EL+AAGREKLASVP+ GGG VAV++A S   GG GA
Sbjct: 29  SVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGA 88

Query: 67  AAAEAPKEEKKVEEKEESDDDMGFSLFD 91
           +AAE+ KEEKK EEKEESDDDMGFSLF+
Sbjct: 89  SAAESKKEEKK-EEKEESDDDMGFSLFE 115
[Close]
BLAST of Spo00566.1 vs. ExPASy Swiss-Prot
Match: RLA21_ARATH (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana GN=RPP2A PE=2 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 3.500e-18
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 1 

		  

Query: 7   TVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPA-GGGAVAVSAAPS---GGAGA 66
           +VG E ++++++L   +V GKD+ EL+AAGREKLASVP+ GGG VAV++A S   GG GA
Sbjct: 29  SVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGA 88

Query: 67  AAAEAPKEEKKVEEKEESDDDMGFSLFD 91
            AAE+ KEEKK EEKEESDDDMGFSLF+
Sbjct: 89  PAAESKKEEKK-EEKEESDDDMGFSLFE 115
[Close]
BLAST of Spo00566.1 vs. ExPASy Swiss-Prot
Match: RLA2B_MAIZE (60S acidic ribosomal protein P2B OS=Zea mays GN=RPP2B PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.000e-17
Identity = 51/85 (60.00%), Postives = 66/85 (77.65%), Query Frame = 1 

		  

Query: 7   TVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSA-APSGGAGAAAA 66
           +VG E DE +L+    ++  KDITE++AAGRE+L+SVP+GGGA+ + A A   G GAA A
Sbjct: 29  SVGAEADEEKLEFLLTELKDKDITEVIAAGRERLSSVPSGGGAIDMGAPAAVAGGGAAPA 88

Query: 67  EAPKEEKKVEEKEESDDDMGFSLFD 91
           E  K+E+KVEEKEESD+DMGFSLFD
Sbjct: 89  EEAKKEEKVEEKEESDEDMGFSLFD 113
[Close]
BLAST of Spo00566.1 vs. TAIR (Arabidopsis)
Match: AT3G44590.2 (60S acidic ribosomal protein family)

HSP 1 Score: 98.2 bits (243), Expect = 2.700e-21
Identity = 57/83 (68.67%), Postives = 66/83 (79.52%), Query Frame = 1 

		  

Query: 8   VGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAEA 67
           VG + D   ++L   +VSGKDI EL+A+GREKLASVP+GGG VAVSAAPS G G AAA A
Sbjct: 30  VGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGG-VAVSAAPSSGGGGAAAPA 89

Query: 68  PKEEKKVEEKEESDDDMGFSLFD 91
            K+E K EEKEESDDDMGFSLF+
Sbjct: 90  EKKEAKKEEKEESDDDMGFSLFE 111
[Close]
BLAST of Spo00566.1 vs. TAIR (Arabidopsis)
Match: AT2G27710.1 (60S acidic ribosomal protein family)

HSP 1 Score: 92.8 bits (229), Expect = 1.100e-19
Identity = 56/88 (63.64%), Postives = 72/88 (81.82%), Query Frame = 1 

		  

Query: 7   TVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPA-GGGAVAVSAAPS---GGAGA 66
           +VG E ++++++L   +V GKD+ EL+AAGREKLASVP+ GGG VAV++A S   GG GA
Sbjct: 29  SVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGA 88

Query: 67  AAAEAPKEEKKVEEKEESDDDMGFSLFD 91
           +AAE+ KEEKK EEKEESDDDMGFSLF+
Sbjct: 89  SAAESKKEEKK-EEKEESDDDMGFSLFE 115
[Close]
BLAST of Spo00566.1 vs. TAIR (Arabidopsis)
Match: AT2G27720.2 (60S acidic ribosomal protein family)

HSP 1 Score: 89.7 bits (221), Expect = 9.700e-19
Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = 1 

		  

Query: 9   GVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPA-GGGAVAVSAAPS---GGAGAAA 68
           G E ++++++L   +V GKD+ EL+AAGREKLASVP+ GGG VAV++A S   GG GA A
Sbjct: 46  GAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGAPA 105

Query: 69  AEAPKEEKKVEEKEESDDDMGFSLFD 91
           AE+ KEEKK EEKEESDDDMGFSLF+
Sbjct: 106 AESKKEEKK-EEKEESDDDMGFSLFE 130
[Close]
BLAST of Spo00566.1 vs. TAIR (Arabidopsis)
Match: AT5G40040.1 (60S acidic ribosomal protein family)

HSP 1 Score: 74.7 bits (182), Expect = 3.200e-14
Identity = 46/86 (53.49%), Postives = 62/86 (72.09%), Query Frame = 1 

		  

Query: 7   TVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAE 66
           +VG E D+ ++ LFF  +  +D+TEL+A GREK+A++ +GGGAVAV++   GGA  AA  
Sbjct: 29  SVGAEIDQEKIDLFFSLIKDRDVTELIAVGREKMAALSSGGGAVAVASGGGGGAAPAAEP 88

Query: 67  APKE-EKKVEEKEESDDDMG-FSLFD 91
           A  E +KK EEKEES+DD G  SLFD
Sbjct: 89  ASVESKKKEEEKEESEDDGGMMSLFD 114
[Close]
BLAST of Spo00566.1 vs. TAIR (Arabidopsis)
Match: AT3G28500.1 (60S acidic ribosomal protein family)

HSP 1 Score: 65.5 bits (158), Expect = 2.000e-11
Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = 1 

		  

Query: 7   TVGVEPDEARLQLFFDQVSGKDITELVAAGREKLASVPAGGGAVAVSAAPSGGAGAAAAE 66
           +VG E DE ++ L F  +   D+TEL+AAGREK++++ +GG AVA+ A   GG  A+AAE
Sbjct: 29  SVGAEIDETKIDLLFSLIKDHDVTELIAAGREKMSALSSGGPAVAMVAGGGGGGAASAAE 88

Query: 67  APKE-EKKVEE-KEESDDDMG-FSLFD 91
              E +KKVEE K+ES DD G   LFD
Sbjct: 89  PVAESKKKVEEVKDESSDDAGMMGLFD 115
The following BLAST results are available for this feature:
BLAST of Spo00566.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902057439|gb|KNA02883.1|5.0e-33100.hypothetical protein SOVF_2144... [more]
gi|731349570|ref|XP_010686061.1|6.1e-2375.5PREDICTED: 60S acidic ribosoma... [more]
gi|460391403|ref|XP_004241310.1|1.8e-2275.0PREDICTED: 60S acidic ribosoma... [more]
gi|970037816|ref|XP_015080240.1|1.2e-2175.2PREDICTED: 60S acidic ribosoma... [more]
gi|747062724|ref|XP_011077887.1|2.0e-2173.2PREDICTED: 60S acidic ribosoma... [more]
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BLAST of Spo00566.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9Q845_SPIOL3.5e-33100.Uncharacterized protein (Fragm... [more]
A0A0J8ER63_BETVU4.3e-2375.5Uncharacterized protein OS=Bet... [more]
K4C9G1_SOLLC1.2e-2275.0Uncharacterized protein OS=Sol... [more]
W9QTA2_9ROSA1.4e-2173.660S acidic ribosomal protein P... [more]
M1AAF6_SOLTU2.3e-2172.4Uncharacterized protein OS=Sol... [more]
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BLAST of Spo00566.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RLA2A_MAIZE9.7e-2166.660S acidic ribosomal protein P... [more]
RLA24_ARATH4.8e-2068.660S acidic ribosomal protein P... [more]
RLA22_ARATH2.0e-1863.660S acidic ribosomal protein P... [more]
RLA21_ARATH3.5e-1863.660S acidic ribosomal protein P... [more]
RLA2B_MAIZE1.0e-1760.060S acidic ribosomal protein P... [more]
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BLAST of Spo00566.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G44590.22.7e-2168.660S acidic ribosomal protein f... [more]
AT2G27710.11.1e-1963.660S acidic ribosomal protein f... [more]
AT2G27720.29.7e-1963.960S acidic ribosomal protein f... [more]
AT5G40040.13.2e-1453.460S acidic ribosomal protein f... [more]
AT3G28500.12.0e-1150.560S acidic ribosomal protein f... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027534Ribosomal protein L12 familyHAMAPMF_01478Ribosomal_L12_archcoord: 1..90
score:
NoneNo IPR availablePANTHERPTHR2114160S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBERcoord: 7..90
score: 5.7
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 7..89
score: 1.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006414 translational elongation
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016787 hydrolase activity
RNA-Seq Expression