Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAAACTAAAAACTTTGCAGTTTGCACTTCTCAGTCTCCTCCCACGCAAACACACTCAACTCACTCACAGAAAAAAGCAGGAGAGAACTCAATCAAGCAACAAATTTCATGGCAAAGCATAAAAAACAAACCCTATTTCCACTTAATTTAGCATTGCTAATCATTATAATTGCAGTATCAAGTGCACAAATTGCAGAATGTTTGAAAAAACCAGAAGCATCTGCAAGAAAACAAGATATACCCTTTATCAAATGTCAAGTTTGTCAAAAACTTGCTTCACAACTGTATTCTCAAGTGCAGAAGAACAAAGATGCTCAGATCTCACCTAAAAAGGTTGTTAATTTGTTTTTAGTTTTCTGGGTATTGTTGTATTTTGTGAAATTTTTATTGGGTTTTATTTTAATTTTGAAAATTATTGATGTTTGGGTTTATTGGGGTTTTGATTAAATTGCAGATTACTGAGTATGAGGTTATTGAGATTGTTGAGAATGTATGTAATTTGAAGAAGGAAGAATCTGATTGGATTTCGAAAATCGACATTGTTGAAAAGGGTGATCAATTGGAGGTAAATTTCTATCTTTTGGGGGGCTTTTATGATTTTGTTTGCTTGAATTAGTAGATTTAAGTTTTAAAGCTGGGTTTTTTAATTAGTAGATTAAGCTGTGTTTCTCAATTCGAAATATTGTTGAATTTGCTTGATGATTGAGTATTATTGTATTGTGGAGTTATTGAATTTTGTACTGAGTCTTGGATTCAGTATTTGTACCTTTTGAATTATTGAGCTGTGTTTCCAATTCTTACTGTTTTTTGTGAAATCTTTACAAGTCGAGTTCAAAGCTTAATCTTTCAATTTTAAGCTGAAAGATGTTGAATTTACTTGATGATTGAGTATTATTGTATTGGGGTGAGGACATTTGCGTCCTGAATATTGAACGCATTTGTTCTATTTGATTGCCAGCAAACCAGTCAGTTCCTTTCATTCATTTTGTGATTCCCACAAAGGTGCATTAGAGCATCTCTAATGGTAAGCTAATTTTTAAATTAGCTTATCACGCCACATAATATTTCAAGCTATTTTCCTTTCTAGCTAGTTAGCACCCTAGTGGTTAGCTACTAGCTTGATATTTAATGTAGTCATATTTGTCAATCAATATTTAAATTTAATTTAATTTAAAATTATTTCATTAGACAAGTTTTTTCAAGCAAATTAGCTTAAATAAGCTAATTTGCTTGGCCAAGCTAATTTATTATTCCAACTCCAATGGTCAAGCTAGTAGCTTGGAATTTCTAAAAATTGCAAGCAAGTCCCTAGCTACAACCATTGGAGATGCTCTTACAAGCCTTTATATATGCGGCTGAACAAACAATGAACCCTAGGTCATTCTTGTTGTGTCCAATCAAGTAATGATAGCTATCCTAGGACATCACATGACACTAACAGACAAACTTAGTCATGTGACAGAATCAACATAGAAAGTAGCATAAAACTAGGACAAACAGATCAGCAATTTGTTGTGGACTGGGCTGACAATTGGCCTTCTTCTTTCAACATGCGGAGTTGTTGAATTGTGTAGGGAGTTTTTGGATTCAGTATTTGTACTTCGAATTATTAAGCTGTGTTCCTATTCTTACTGTTATTGGTGAAATCGTGTACGAGTCGAGTTCAAAGCTTAATCTTTCGATTTTCAGCTGAAAGCTTGTTGAGTTTACTTGATGATTGAGTATTGTTGTATTGCGGAGTTCTTGGATTCAGAATTGGTACCTTTTGAATTGTTGATGTGTGATTGTTTAATCAAGTGATGAGAAGGTAACTGAGGAAGGAGTCATAAATCTTCGCATTGCATTATGTTTAGAATCTCGATTTTCTCTGTCACAAAAGATATTGTTCGGATAACAAGCTCATGAACAGCCGGGTGCTTGAATTCCTAGCTTATTAATGTGAGAGTAATGTCCAATGACTAATGATCATGGTCTATTACTCATTATACTCATTTGGCATGCCAGGAACCAACACAAGTTGGTGGAGTTGGCGGGGAACTCACCTTGTGACTTGGAGGTCACAGGGTTGAGCCCCATCAGTTGTGAAATGCTTGGTAGTGGATCAAGCGTAGACGAGTTGGTTAAGTAGGGTAACTTCTCTTACCTAATAAAATTAAAACGTGGCATGCCAAGGAGAAATCTAAGAGAAATTAAAATATTAAAAGTGATGGGTGCTGATAAATGATTTCCCATTGAGGGATAATGCTTGCTATTTCCCCCGAAATAAAGTTTCAAGAGATTTTTGAGGGACGCATGTCTTGGACTCTCTAGGATGAGGTGTAGCTTTAGTAATAGAGTCTGTTAGTCAGAGTTGTCATTTTACCTCAAATACTCCTGTTGGATTCTCAATAGTTGGGTATGGGTATGGATGGAAACATATTTGTTAAAAATCTTGCTTTTCAAATACATTGTTTTTATTTGCATCGATGGCTTTTGTATGTAATTTTTTTTATTGATATATGTGAAAAATAATTTGTTGGTAGGGATATCAGTATGATGCTTCAAGTAGCAAATGATGCATCCAGTTCTTACTTCTTAGTTGTTTTTATTTAAACTCTGATCCTGTACTGATTCAGTTACCTAACTGTACTACAATTTCTTAAAACTTCATTAAGTTGTCAAACTCTTTTTTCTGTCTTTAATAATATTTGAATATTTCTACATTTTACTTATTGCTTTCAGCTAGTTGATCAAGATGTTGAAGGACATTGCAACTCAAAATGCAAGACTATCGAACGGGCATGTCAAGAGGTTAGTTTGAGCCTGAAATCAATTTTACTTCTTGATTATTTGTAATCAGGATAGGTTGGAGTTTCATGATTTCGGAATTGATCTTGTTTTTTCAGTGACTAATGTTTTTTTTTATTATTTCCTGTTTGATGCAGATTGTTGGATTTTCAGACACTGATATTGCTGAATACATATACGCTCGGAAGCCTCAGCTTGATTCTTTAGTAAATTATCTATGCAAGGACCTCACTGAAGCATGCAATAAGAGGCCACCTCCTGTGCCAAAGGTACGCCATGTTCTTTATTCTTTAGTAAATTGTGCTTGGCTGGTTCTTTTCATTTCATTTTCGTGAAAAAAATAGGAACCTTTTGATTTGAAGCATACCAATTGTCATTGTTCTTAAGAAAAAAATAATTTATTCAATGATTTATATGAAATGTATTTCCCACCATCCACTATATAAGGCCTTCATCCCCAACCACTGTGTGTAAAGGAATTAATGGTAATCCAAAAAACATTGATGATTCAAGTTCATTGGACTACGGAAATGGGGTAAACCGGTAAAGGTTGTCTTTCAACATTTCAGTGCTCAGAGACATTTTTGTAAAAGACGAGAAGTTATCATCCTCTAGTTTAGTTTAGACTTTAAAGAGCGTGTGAACTGAATTTTCTGCTAATACTGTGTAATGGCACACAGTTAAAATGATGTACAACGATGTACAGAAAATGGAAATGATACGGATTTGTTCCCTTCACCTTATTCTTATTGCGTATTAGATCAAACTAGAAAACTTAGACTAGATCAAACTAGAAAAAGCAAAAAACACCAGACTACACCACAAACTAGAAAAATTAAGGCCTTAGGGAGTATGACATTGCAATGTCCCTCTGTTGAAGTTTCCAAAATGTTGACAATGTCCCTCTATGGAAGTTTCCAAAATGTTGACAATATGAATAGAAGAGAACAAGACTTCATAAATAATCGAGACACTTTTGCATTTTTTTTTGGGTGCGAATGAGCCATAAAGGCAATATAAATTACAAATAGGGGTGGGGAGATTCGAACCTGAGACCTGTCATGCACATTCCCTCAGTGTTAACCACTAAGTCAAGACTTTATTGGTTTTGCAAACATATTCTAAGTCAAAAGTTTCTTTGTGAGACTCTGATGTTGAATCTTAATGAACTTCGTCACAGGATAGGGTCCCAGGGGAACCATTTGTCCCGAAACCAGCCAAAGAAGCTGAAATGGAAAAAATGATGAGATCCATGCAGGTAAGAGTCACATCCTTTACCACTCACTCCTCCCATTTTCCTTTGTTTCTCTTAAATCCCTCATGAGTATCGATACTTTTCTGTATTATAGGGTCTACCAGGAGCACCGGGGATGAAAATGTATTCCAGGGAAGAATTGACGAACAACATGCAAAACCTTGGCGGTGAGGATGTTGATGTTGATGAGGATGATGATGACGACGACGATGAGGCACAATTCCGATCAAATTTGGTACGTTCATGTTTTTTTATTTTTTATTTTTATCAGGGTCTTGAATTGGTTAATGACTTGATTTGACTTATATATCTTCCATTTTGGCCCTCTTAGTTTACTTCTTGCGTTTTGCAAACCTTTTTCGTTGAACTTTCTTTACATATTTTTTTGTCCTTTTCTGTTTTCTCTCAAAGCTTTCTCTAACCTTTTCATTAGTTTCCCCCACAAAACTTTTTTTCCTCTTTGTCTTTTCTTGGCTCCCTTTTATATGATATTTTCAAATGTCTTATTTTATTTGTTTGTCCTTATTATTTTATTTATTTTTCTTTCGTTTTTAACTTTACTTATTTTTCTTATCCCTTATACTCCCTCCATTTCTTTTTGATGTATCCATTTGGAATCTGGGGTGGTTTTTAAGAAATTTGGAATCTTAGTTTGTATGGGTATAAGTGTAATGATTGGGTGTAAGAGAAATGATTGGGTGTAAAAGATTATAATAAATAAAGGAGTGAGAAAATAATAAAGAAATAAGGTAAGAGAGAGGAGTGATAATGATGAGTGATAAAGGAGGTGAGAGAGTGGGTATATGGGGAAGGGAAAAGAATTAAATATTATGCGTGGGGAAAATTAGGTGGGAATATGGGTAGAATCTTTAGGTATTTTGGTAATTAGATAGAAATGTAAGGGTATTTTAGGATAAAATGTATGTCCAAAAATAGAATAGATTCTAAATGGATACAACAATATGAAACGCTTAAAATGGAAACGGATACAACAATAAGAAACGGAGGGAGTATTATTTTTCTTTGATATTTTTCTTTGTTTTACTTTCATTAATTTCACTTTCTCCCTCTTCCTTGTTTATTCTTTTTACTTCCCGCCCCTTTCTTGTTTGATTGGTCACAATGGCGATCTCCTATGACAATTCATGTTACGTGACCCCAAATCATTTGGGGACTAAGGCTTTTGTTGTTGTTGAATTGGTTAAAATCCTCTCTCCTGTTGTGTGTACTGAGGTTCATGGCTGCAAAACCAGGGAAAAGCTTTCAAGGAGAAGGCGAAGAAAAAAATCAAAAAAGATGATTGGAAAGAGACGGTGATGAAACAGGTAACAGATACCGGAAAAACTCTTAAGAAACACGCGAATAGAGTCTCTCACCGGCTAAGAAAATGGTGGAGATCGAAAACAAGTGCGGCGCCTAAGAAGAAATCAACAGGCAACAAGGCAGAACTTTAAGAGTACTTACTGATTCAAAACAAGTCACCAGTTTTCGTTTCCTTTCTCTTTTCTTTGTATTTTCAGAGGCATTTATATATAACAAGGACACTATTTGAGAGAATTAGAATTTCATAAGTTCCATTTTTTCTGAGTGTGAAAAAATATTGAAAAATGTGATGAGAAAAAGTGACATAGAATTAAATCATAAGTTTAGGCGATCGTTGTATACTTCTTGTCAACCAAAACATCTGTTACCATACTATGAATGAAGTAGAGGTGTAGAGGTTCTATCAGCTATTACATCCGCTCGTAAAAGTTTTTTTACGCCTTGAAATAAGTGTTTAAAGAATGAAACATTGGCC CCAAACTAAAAACTTTGCAGTTTGCACTTCTCAGTCTCCTCCCACGCAAACACACTCAACTCACTCACAGAAAAAAGCAGGAGAGAACTCAATCAAGCAACAAATTTCATGGCAAAGCATAAAAAACAAACCCTATTTCCACTTAATTTAGCATTGCTAATCATTATAATTGCAGTATCAAGTGCACAAATTGCAGAATGTTTGAAAAAACCAGAAGCATCTGCAAGAAAACAAGATATACCCTTTATCAAATGTCAAGTTTGTCAAAAACTTGCTTCACAACTGTATTCTCAAGTGCAGAAGAACAAAGATGCTCAGATCTCACCTAAAAAGATTACTGAGTATGAGGTTATTGAGATTGTTGAGAATGTATGTAATTTGAAGAAGGAAGAATCTGATTGGATTTCGAAAATCGACATTGTTGAAAAGGGTGATCAATTGGAGCTAGTTGATCAAGATGTTGAAGGACATTGCAACTCAAAATGCAAGACTATCGAACGGGCATGTCAAGAGATTGTTGGATTTTCAGACACTGATATTGCTGAATACATATACGCTCGGAAGCCTCAGCTTGATTCTTTAGTAAATTATCTATGCAAGGACCTCACTGAAGCATGCAATAAGAGGCCACCTCCTGTGCCAAAGGATAGGGTCCCAGGGGAACCATTTGTCCCGAAACCAGCCAAAGAAGCTGAAATGGAAAAAATGATGAGATCCATGCAGGGTCTACCAGGAGCACCGGGGATGAAAATGTATTCCAGGGAAGAATTGACGAACAACATGCAAAACCTTGGCGGTGAGGATGTTGATGTTGATGAGGATGATGATGACGACGACGATGAGGCACAATTCCGATCAAATTTGGGAAAAGCTTTCAAGGAGAAGGCGAAGAAAAAAATCAAAAAAGATGATTGGAAAGAGACGGTGATGAAACAGGTAACAGATACCGGAAAAACTCTTAAGAAACACGCGAATAGAGTCTCTCACCGGCTAAGAAAATGGTGGAGATCGAAAACAAGTGCGGCGCCTAAGAAGAAATCAACAGGCAACAAGGCAGAACTTTAAGAGTACTTACTGATTCAAAACAAGTCACCAGTTTTCGTTTCCTTTCTCTTTTCTTTGTATTTTCAGAGGCATTTATATATAACAAGGACACTATTTGAGAGAATTAGAATTTCATAAGTTCCATTTTTTCTGAGTGTGAAAAAATATTGAAAAATGTGATGAGAAAAAGTGACATAGAATTAAATCATAAGTTTAGGCGATCGTTGTATACTTCTTGTCAACCAAAACATCTGTTACCATACTATGAATGAAGTAGAGGTGTAGAGGTTCTATCAGCTATTACATCCGCTCGTAAAAGTTTTTTTACGCCTTGAAATAAGTGTTTAAAGAATGAAACATTGGCC ATGGCAAAGCATAAAAAACAAACCCTATTTCCACTTAATTTAGCATTGCTAATCATTATAATTGCAGTATCAAGTGCACAAATTGCAGAATGTTTGAAAAAACCAGAAGCATCTGCAAGAAAACAAGATATACCCTTTATCAAATGTCAAGTTTGTCAAAAACTTGCTTCACAACTGTATTCTCAAGTGCAGAAGAACAAAGATGCTCAGATCTCACCTAAAAAGATTACTGAGTATGAGGTTATTGAGATTGTTGAGAATGTATGTAATTTGAAGAAGGAAGAATCTGATTGGATTTCGAAAATCGACATTGTTGAAAAGGGTGATCAATTGGAGCTAGTTGATCAAGATGTTGAAGGACATTGCAACTCAAAATGCAAGACTATCGAACGGGCATGTCAAGAGATTGTTGGATTTTCAGACACTGATATTGCTGAATACATATACGCTCGGAAGCCTCAGCTTGATTCTTTAGTAAATTATCTATGCAAGGACCTCACTGAAGCATGCAATAAGAGGCCACCTCCTGTGCCAAAGGATAGGGTCCCAGGGGAACCATTTGTCCCGAAACCAGCCAAAGAAGCTGAAATGGAAAAAATGATGAGATCCATGCAGGGTCTACCAGGAGCACCGGGGATGAAAATGTATTCCAGGGAAGAATTGACGAACAACATGCAAAACCTTGGCGGTGAGGATGTTGATGTTGATGAGGATGATGATGACGACGACGATGAGGCACAATTCCGATCAAATTTGGGAAAAGCTTTCAAGGAGAAGGCGAAGAAAAAAATCAAAAAAGATGATTGGAAAGAGACGGTGATGAAACAGGTAACAGATACCGGAAAAACTCTTAAGAAACACGCGAATAGAGTCTCTCACCGGCTAAGAAAATGGTGGAGATCGAAAACAAGTGCGGCGCCTAAGAAGAAATCAACAGGCAACAAGGCAGAACTTTAA MAKHKKQTLFPLNLALLIIIIAVSSAQIAECLKKPEASARKQDIPFIKCQVCQKLASQLYSQVQKNKDAQISPKKITEYEVIEIVENVCNLKKEESDWISKIDIVEKGDQLELVDQDVEGHCNSKCKTIERACQEIVGFSDTDIAEYIYARKPQLDSLVNYLCKDLTEACNKRPPPVPKDRVPGEPFVPKPAKEAEMEKMMRSMQGLPGAPGMKMYSREELTNNMQNLGGEDVDVDEDDDDDDDEAQFRSNLGKAFKEKAKKKIKKDDWKETVMKQVTDTGKTLKKHANRVSHRLRKWWRSKTSAAPKKKSTGNKAEL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo00508.1 vs. NCBI nr
Match: gi|902169723|gb|KNA07700.1| (hypothetical protein SOVF_169500 [Spinacia oleracea]) HSP 1 Score: 619.4 bits (1596), Expect = 3.500e-174 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1
BLAST of Spo00508.1 vs. NCBI nr
Match: gi|731373054|ref|XP_010666531.1| (PREDICTED: uncharacterized protein LOC104883680 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 458.8 bits (1179), Expect = 8.000e-126 Identity = 237/314 (75.48%), Postives = 272/314 (86.62%), Query Frame = 1
BLAST of Spo00508.1 vs. NCBI nr
Match: gi|661893386|emb|CDP03195.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 391.7 bits (1005), Expect = 1.200e-105 Identity = 197/305 (64.59%), Postives = 247/305 (80.98%), Query Frame = 1
BLAST of Spo00508.1 vs. NCBI nr
Match: gi|747063340|ref|XP_011078214.1| (PREDICTED: uncharacterized protein LOC105162013 [Sesamum indicum]) HSP 1 Score: 379.0 bits (972), Expect = 8.000e-102 Identity = 203/318 (63.84%), Postives = 248/318 (77.99%), Query Frame = 1
BLAST of Spo00508.1 vs. NCBI nr
Match: gi|225444981|ref|XP_002282754.1| (PREDICTED: uncharacterized protein LOC100249262 [Vitis vinifera]) HSP 1 Score: 378.3 bits (970), Expect = 1.400e-101 Identity = 199/318 (62.58%), Postives = 249/318 (78.30%), Query Frame = 1
BLAST of Spo00508.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QKC1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_169500 PE=4 SV=1) HSP 1 Score: 619.4 bits (1596), Expect = 2.500e-174 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1
BLAST of Spo00508.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B7X1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_002660 PE=4 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 5.500e-126 Identity = 237/314 (75.48%), Postives = 272/314 (86.62%), Query Frame = 1
BLAST of Spo00508.1 vs. UniProtKB/TrEMBL
Match: A0A068U3V3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041699001 PE=4 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 8.300e-106 Identity = 197/305 (64.59%), Postives = 247/305 (80.98%), Query Frame = 1
BLAST of Spo00508.1 vs. UniProtKB/TrEMBL
Match: D7TBA6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g02520 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 6.200e-101 Identity = 195/306 (63.73%), Postives = 243/306 (79.41%), Query Frame = 1
BLAST of Spo00508.1 vs. UniProtKB/TrEMBL
Match: A0A061GTP9_THECC (Plasma membrane OS=Theobroma cacao GN=TCM_037700 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 3.100e-100 Identity = 196/306 (64.05%), Postives = 248/306 (81.05%), Query Frame = 1
BLAST of Spo00508.1 vs. TAIR (Arabidopsis)
Match: AT4G29520.1 (LOCATED IN: endoplasmic reticulum, plasma membrane) HSP 1 Score: 347.8 bits (891), Expect = 7.000e-96 Identity = 179/306 (58.50%), Postives = 245/306 (80.07%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo00508.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo00508.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo00508.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo00508.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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