Spo00479 (gene)

Overview
NameSpo00479
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_01216 : 136286 .. 140245 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTTCTCTCTCTACAATCAGCACAACTGGCAGTCATGGACTTTCAGCTTTCCACTGCTTTGCTACAAATATCCACCTCTAAATCTTGGCTTCATGTATCTGAAGTCCTGCCCACTGGATGAGCACTTCCAGTTCTTTGGTAGAATCCCCATCTACGTTTCTAACCCCGAGGACTGCAGCAGGCTCCAGGCTCCAGGCTCCACTCCCATAAACTCAGCAGATAGTTGTGATGGTATCCCATCAGACAGAGGTGTGTGCTCCACCAACTTTTGCCTTTGGCTGAGAAACATGGAAAACTGGGTGGATTGTCTAACTGATAAGCAGCAGAACCAACCTTATTCACCACTTGATAAGGGCCATAAAACTGAGTAGCCAGCTTTTCAAATACGCCTTATTTCCCACTTGGAATTACACTTCTCTGCGTTTGCAGTTTGCAGTCTTGAGTCAAGTTCATCCTGAGTCAAACCTTAAGCAAATGACCTTTAAGATCATCTAGGATTGCATCCCTTTCCAATATTTGTTCTTCAAACTTCAATTGTAGCTACCGTGGTGCTGATTTTTGCATATCTGGTGAAATGAGGAGGGTCCTTTCATACAAGCTTTGAAGGGGATACATTGGGTAGAGGAATGAATAGAAGATGGTATTATACAAATACTCTGCCCAAGGTAACCATCTTCCCCAAAAATTGGGTTTGTCTGTGACGAAGCATCTGAGATTATCCTCAAGGCTTTTGTTGACAATTTCTGTCTATCCATCAGATTAGGGGTCAGTGCATCTATGTTACACAGTCCCTTGTAAGTTGTAACCTAACAAGTAACAAGTAACAAGTAACAAGTAACAAGTAACAAGTAACAACACATGCTTAAGAAAATCCAGTCTTTGTCTGACACAATTGTAGCAGGAAAGACAAGGTCGATGAATACAGTTAATGCAGTAAAGGGATGTTTAAGGACAATAGGTGATGTGCTGGCTATTGCAAGTATGCATAAATGCACAAAAACTGGATTTTTCTTATGCTGCCTCTAGTCTATATCCTTGGTAGAAACGGAGGGATGGACATGAATGGAGAATGAGAAGTGGGGAATACCTCAAACAGCAAGAGGAGAGTTTAAATGACACTTTCTGGAAGTATGGTGAAGTGTTTTCGTTCTTTAATGATCAATTTCCTATTAAGGGGAATTATGCATCTAAAGATTTGTTGTATATTTAGAACAAGTGTAAGTTTTATCAGCAGGCAGCAGCCCCTCCTAACTCTAGCTTAGGTAGATGACCATTAGTGGGGTGTATATAGAACCTTACTATACCAAATATACGTTGGTCTTGGTGTGTTAAATCTAGAGATTTCTTCTTGGTCAAGAATCTCACTTGTGACTATTAGGCTTGCTAGCTCTAGTCGTTGGATGGTTGATGCAGAGTGGTCCCATTAATAGCTTTTGTTTGCTCACAGGTTGTGGTTGAAAATATATTAGGGCTGCTTGATCTTTGTGAGTCTTAGACAGTATTTGAAAGAACTAAAGCAAGGCGTTTATTAATTAAAGGATCTATTAATGCGACCAGTTGTATCACGGAAGCTACTGAAACAAGGAAGATGTAGGGATGAGGATGACTTCTCGTGGTCAACAGGTTAGTTTTCAAGTGCAATTGTTTTGCTTGGTATGTAACATCATACTTTTTTGGCTTATTGGTAGCTTGTTGAACAATTACATTTACGGCCAGTAGAATTTACCATTTTCTTCGTTGTTCCACTGATAACTGAAATATGCTAAGACATTTACAATTTTGGTCAGAGACAGATTTTTTGATTCAAGGCAATCTGTCTTGCAATAAAATTCTCAGGCCTGCTCCCCATCCAAAACATACTTATCATCAATATATTCACTAGCTACTGCCTAGCTATCAGGCTTAAGTAATATTACACCGGCTTTCGGAGCACCAAGCCCAAACCCAAATAGGAGCCAAGGGTGGTTTGTCAAGGGTGATGGATAGGTTTATACAAAAAAATATAAAAAATTCCATTTTTAAGATTTAAGACATAAATAGGAGTGATCTGCTTACTAAAGATTCTATTGCTTCCCTCATAGGAGTGATCTGCATTTAATTTGAAACTAGTGTTTAAGCCTGGGTTACTGCACTAGGGAACATTTATATTATTCTTATTTGAAAATGTTAGTGATCAATTTGTCTTGTATTACATTTATTAGTATTTGTTTCTATAATAATACTCCGTAACATAAAACATGTTATAGCTTTAGTGGGGAANTGTGTTAAATCTAGAGATTTCTTCTTGGTCAAGAATCTCACTTGTGACTATTAGGCTTGCTAGCTCTAGTCGTTGGATGGTTGATGCAGAGTGGTCCCATTAATAGCTTTTGTTTGCTCACAGGTTGTGGTTGAAAATATATTAGGGCTGCTTGATCTTTGTGAGTCTTAGACAGTATTTGAAAGAACTAAAGCAAGGCGTTTATTAATTAAAGGATCTATTAATGCGACCAGTTGTATCACGGAAGCTACTGAAACAAGGAAGATGTAGGGATGAGGATGACTTCTCGTGGTCAACAGGTTAGTTTTCAAGTGCAATTGTTTTGCTTGGTATGTAACATCATACTTTTTTGGCTTATTGGTAGCTTGTTGAACAATTACATTTACGGCCAGTAGAATTTACCATTTTCTTCGTTGTTCCACTGATAACTGAAATATGCTAAGACATTTACAATTTTGGTCAGAGACAGATTTTTTGATTCAAGGCAATCTGTCTTGCAATAAAATTCTCAGGCCTGCTCCCCATCCAAAACATACTTATCATCAATATATTCACTAGCTACTGCCTAGCTATCAGGCTTAAGTAATATTACACCGGCTTTCGGAGCACCAAGCCCAAACCCAAATAGGAGCCAAGGGTGGTTTGTCAAGGGTGATGGATAGGTTTATACAAAAAAATATAAAAAATTCCATTTTTAAGATTTAAGACATAAATAGGAGTGATCTGCTTACTAAAGATTCTATTGCTTCCCTCATAGGAGTGATCTGCATTTAATTTGAAACTAGTGTTTAAGCCTGGGTTACTGCACTAGGGAACATTTATATTATTCTTATTTGAAAATGTTAGTGATCAATTTGTCTTGTATTACATTTATTAGTATTTGTTTCTATAATAATACTCCGTAACATAAAACATGTTATAGCTTTAGTGGGGAAAACATGCTAAACTCTTATGTGATTTTAAATAATATTTTTTTCATGACTATATATCAGACACACAAAAAAGAAAACTCTAGAGAGAGAAAGGATGAGAGAGGGGCTCTCAAGTAACAAAAGTTCTTCTAGCACTTATCTCCCCACCGACAACACTTTTATGGTTTAAATTTCTCAAAATAGCCCAAAGAGCTTCATCTTTCCGCCCCTTCTACGGTCCTTTTCATCTCCATGGATGCTACTGCTCTGCCTCCTTCCTTCCATGTCCCCCTTCTTTGTGGTGAAGAATTTGATATTGATTTTTTTTAGTTTGTCTAATTTGTTCTTATGGAAATTCAAGCAAGATTACTTGCTTTTTGACCGGCTTTTAGCCATGGCCTGCATCGCAAGATGCTTTGACATAAAATTTGAAGGAAAAAACAGGAATTTTCTTGTAATTGTAACCTAATTTGTCAATTGTTACAGGAATTGAAACATGCTTGGAATAATTTGTCGATAACAATTGGTGGATGAGAGTTGAATCTTGTTGATGAAGCGTTGGAAGATTGATGGCAGAAAATCGTCTCCGGCCGAGTTGAACATTCTATTTACTTTGTCACCTCCGTTGTCTCAGCTTCCTTGAGAAGCCTTATTTCTTTGGCTTCCTTGAGAAACTTTGGTTTAGTTTAGGTGTTTTATTTTACTTTTTTCTTTTTAAGTTTTAGTTGTATTTTCTTATCTATTAGTCTTTCCCTGAGATTAGAGCTGTCAAAACAGGTCATCGG

mRNA sequence

ATGTGTTTCTCTCTCTACAATCAGCACAACTGGCAGTCATGGACTTTCAGCTTTCCACTGCTTTGCTACAAATATCCACCTCTAAATCTTGGCTTCATGTATCTGAAGTCCTGCCCACTGGATGAGCACTTCCAGTTCTTTGGTAGAATCCCCATCTACGTTTCTAACCCCGAGGACTGCAGCAGGCTCCAGGCTCCAGGCTCCACTCCCATAAACTCAGCAGATAGTTGTGATGGTATCCCATCAGACAGAGTTGTATCACGGAAGCTACTGAAACAAGGAAGATGTAGGGATGAGGATGACTTCTCGTGGTCAACAGGAATTGAAACATGCTTGGAATAATTTGTCGATAACAATTGGTGGATGAGAGTTGAATCTTGTTGATGAAGCGTTGGAAGATTGATGGCAGAAAATCGTCTCCGGCCGAGTTGAACATTCTATTTACTTTGTCACCTCCGTTGTCTCAGCTTCCTTGAGAAGCCTTATTTCTTTGGCTTCCTTGAGAAACTTTGGTTTAGTTTAGGTGTTTTATTTTACTTTTTTCTTTTTAAGTTTTAGTTGTATTTTCTTATCTATTAGTCTTTCCCTGAGATTAGAGCTGTCAAAACAGGTCATCGG

Coding sequence (CDS)

ATGTGTTTCTCTCTCTACAATCAGCACAACTGGCAGTCATGGACTTTCAGCTTTCCACTGCTTTGCTACAAATATCCACCTCTAAATCTTGGCTTCATGTATCTGAAGTCCTGCCCACTGGATGAGCACTTCCAGTTCTTTGGTAGAATCCCCATCTACGTTTCTAACCCCGAGGACTGCAGCAGGCTCCAGGCTCCAGGCTCCACTCCCATAAACTCAGCAGATAGTTGTGATGGTATCCCATCAGACAGAGTTGTATCACGGAAGCTACTGAAACAAGGAAGATGTAGGGATGAGGATGACTTCTCGTGGTCAACAGGAATTGAAACATGCTTGGAATAA

Protein sequence

MCFSLYNQHNWQSWTFSFPLLCYKYPPLNLGFMYLKSCPLDEHFQFFGRIPIYVSNPEDCSRLQAPGSTPINSADSCDGIPSDRVVSRKLLKQGRCRDEDDFSWSTGIETCLE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00479.1Spo00479.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo00479.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo00479.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo00479.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo00479.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
molecular_function GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
RNA-Seq Expression