Spo00467 (gene)

Overview
NameSpo00467
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionActin-related protein 2/3 complex subunit 3 (Arp2/3 complex 21 kDa subunit)
LocationSpoScf_00976 : 78200 .. 81433 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCGTGTTTCGACCTTAAAAGCAATTTGTATTGTACACCTCGTGAATCAATGTACATTTTGTATCCAATTACTTCGTATAATAATTCAATTTCATTAGAGGAAAACGACGTCGGATACAGCACCTAAAAACTCAACTACCCCACAATCGGAAAAGGCCCGATGATAATCAGCTCTCATCAGCTTGAGAGTCTGGAACAACTGAACAAGGAAGGACTCTATAATAATTCAAAGATTCAATTGGTAATTTTTTTTTAATATTTCCTTAATTATCTTGTTAATCCATGATATTTTCAACATTCCCAGGGTTAATTTATTTATGGAAATATCTTCAATTTGATGTTTGTCGAATTAATTTTGTGATTAAATTTCTTGTGTCCAGATCTTTGGCGGGCAACATTGCTGCAATAGTGAGGTTCAAAGCTCATTATGGTGAGAGAATTTGACACCCTTTTCATTATTTGAGCTTAATTGTTGTTAAATTTCGTCAATTGTGATTGAATTTATAGTGAATTGGAACTAGAACTATGTTTAGTGGTTGCTGTGATTTTGGGGTTGAATTTGTTAAAATGAGTTGTTTTGGATCTTCTGGGATTGCTTTTGATCAACAACAACACCAAAGGCTTAGTCCAAAATGATTTGGGGTCGGCTAACATGAACCATAATAAGGAACAATCATAAAATGATTTGGGGTTGGCAAGAATTTCTGGGATTGCTTTTGATCTGGGTTTTTTTTAATCTAAATGTGCTTTCTTTAGCTAAATAGTGCAGAATTTGTGAATGATCGTTTTTCAATTGATTTCTTGTTCTGATGATGGTATTCCCATCTAAGGATGAATGTTATGGCGAAACCTTCAAATTTCTCTATGACGTTCTGTTACGTGCTCTTTCCGTTTCACCTTAAGTATCCATGTTGCACACTCGTCACTCGATGCTCTGATGTGGGTATGAACACTTTGAAACTTCAATCGTGTTGGTGAGCGTGCATAATCTTTGGAAAATGCGCGACTCTAACAACTAAACATGTACAAGTACATCATTAGGGCATCTTTAGAATAGGTGATCAAGGCTAATTCTTAGTTGTTTAGATTTTGAATTGATTTGTTTCTGTGCATCACTATACGTGTTTGATGCTAGAGGGATTAATAAGTTGTGGGTCCGAATGATCATAGGTTTACCACTCTAGTTTTGTTGATGAGGGAGGAGTAACAAAAGCTTGTGGTTGTCCACTACTTCCTTTGAAAAGCCATATCAAGGGTCCTGCTCCAGTTTCAGATCAAGGTTAGGCTAATAACGATTCATTTGTACTCGCTTATCCTTTTGTAAATGAGTTCTGCTACCTATTTCTCCTGTCGTTGATCAACGTGTGCTATGCAAACTTGTGCAGAAAGCATTGATATTGTTGATGAAGCAATTACCTTTTTCCGCGCTAATGTCTTCTTCAGGAATTTCGACATAAAGAGCTCTGCCGATAAGCTGCTTATCTACTTGACATACTATGTCAATGTTGCTTTGAAGAGGCTTGAGGGATGCAGAACATTGGCTGAAGGTACCAAGGCCATTATTAATTTGGGTCTTGAGGAAGTTCCGGTGCCTGGAGAGTCTGGGTTTCCTTTCCCTGGTTTATTCACACCTCCTAAAGGCCATCAGGAAGCACGTAAATTTCTCAACTTCATCCTTACTATAGCTATTATAGATTATAACGTAAACTTGCATGTTTAGCTATTAAATCTGCCTCTGTGAAGCATGTTTCTCCAAACTAGGATTTAGGATTACCAATTCGCATTTGAAAATGCATATGCAAAGGCCAAATTTCAGGATTAGAGCCATATTATCTTCATACTTGACAACCCAAAATGCACTTTTGCAAATTTTTTGGATTCAGAACCGTGTTTGTCAGCTTCATCCTGTGAAATGACCTGATTAAGTGTTCGATTAGGCTTTTCCTCTGATTTGCTACAACGTGTTGTTATCAGATGTCATGAAGTAGGTTATTTTGTTTCCTTAGAACAGCGGAGATTGTCATAAAACAACAGCTTCTGATGTTATCACCTACGTAACTGATAGCTGGAACTTGGGTATTGGACTATTGGTACGGTATCACACAATCACACCCATGTTTATGTCCAAATGTCGTGAAAAATTACCATATTGGTCCATAGTGAAGTACTGAAGTGTCAAGTATCAACACTCGTATTAGAACGTGGAGGATTCAACGTAGAGTGCTTGAGGCCGTAAAAAGAAGAGTCTAGGTTAAATATGTACCACTATTGTTCCATTTCTCAGATATTGAAAAACAGCATGCTCCTTTTTCAGTCTAGTTTGATAAAACCCGGGGGAATGTTATGTTGAACTGATTCCAGTTGCCTACCATATGACATTCGGCAACTCAAAACTTTCTATTTACCTTGTATTTTTCCTCCCATGTGTAAACAGTGTTATTCAGAAACTACCTGAAGCAGATAAGAGAAGAAACAAGTGGGAGATTACTGGGCGTTGCTTATCGACCTAATGGCACTCCAAATAAATGGTGGTTGGCATTTGCTAAGAGGAAATTTGTGAACATCATTGCACTGTAATCAGCTGCTTGCTTGCCGGAAGTACGTGTCAGAAAGAACGAAGAATGAAACAAACATCCAGTTTCAAACAAGTAAGACTGCTCTATGAAATCTGTTCTGCTATGGTGAAAAGAACGTAAAACAAATTAATCAAACGTGTAATTCTTCAAACATTTTTCGACTAGGCAATCAAATTGATGATTATCTCAGTAGGTGTTCTGTATAAAGAAATCTACTAATCTGTGCAGAACCTCTTTAACATACTTGTATGATATCATGCCTGTTGTTCGCGAAGCTAATCAAGTTCGTATACTCTATAACAGCAACCTCGGTATATCTTAGCACATATGGGCACATTGGTAAGCCATGGTTCAGTAGTTGTGCAACACGAAGCACCTTGCGCGTGAACTAGTTCATTTCTCATACTGCTCTCGTTTTCTTTTGTTATATTTTTTTTTTTAAAGTAAGATACAGTGTAAAGCTAATCATGTTTTCTCTCAAGATGTGAAAATAAGTTTTTTTCTTTGGTTACATGACACTCATTTTATCCACAATTATTTGTTACATTGTTTACACCATTCATATAGAAAATTTTAACCTAATTTCACTTGAATATCTTTTTTCATAGTTGTGTTATTTTTTCTTCCACTTCTCCACTTCACTCATCCTAAACTAAAC

mRNA sequence

TTCGTGTTTCGACCTTAAAAGCAATTTGTATTGTACACCTCGTGAATCAATGTACATTTTGTATCCAATTACTTCGTATAATAATTCAATTTCATTAGAGGAAAACGACGTCGGATACAGCACCTAAAAACTCAACTACCCCACAATCGGAAAAGGCCCGATGATAATCAGCTCTCATCAGCTTGAGAGTCTGGAACAACTGAACAAGGAAGGACTCTATAATAATTCAAAGATTCAATTGATCTTTGGCGGGCAACATTGCTGCAATAGTGAGGTTCAAAGCTCATTATGGTTTACCACTCTAGTTTTGTTGATGAGGGAGGAGTAACAAAAGCTTGTGGTTGTCCACTACTTCCTTTGAAAAGCCATATCAAGGGTCCTGCTCCAGTTTCAGATCAAGAAAGCATTGATATTGTTGATGAAGCAATTACCTTTTTCCGCGCTAATGTCTTCTTCAGGAATTTCGACATAAAGAGCTCTGCCGATAAGCTGCTTATCTACTTGACATACTATGTCAATGTTGCTTTGAAGAGGCTTGAGGGATGCAGAACATTGGCTGAAGGTACCAAGGCCATTATTAATTTGGGTCTTGAGGAAGTTCCGGTGCCTGGAGAGTCTGGGTTTCCTTTCCCTGGTTTATTCACACCTCCTAAAGGCCATCAGGAAGCACTGTTATTCAGAAACTACCTGAAGCAGATAAGAGAAGAAACAAGTGGGAGATTACTGGGCGTTGCTTATCGACCTAATGGCACTCCAAATAAATGGTGGTTGGCATTTGCTAAGAGGAAATTTGTGAACATCATTGCACTGTAATCAGCTGCTTGCTTGCCGGAAGTACGTGTCAGAAAGAACGAAGAATGAAACAAACATCCAGTTTCAAACAACAACCTCGGTATATCTTAGCACATATGGGCACATTGGTAAGCCATGGTTCAGTAGTTGTGCAACACGAAGCACCTTGCGCGTGAACTAGTTCATTTCTCATACTGCTCTCGTTTTCTTTTGTTATATTTTTTTTTTTAAAGTAAGATACAGTGTAAAGCTAATCATGTTTTCTCTCAAGATGTGAAAATAAGTTTTTTTCTTTGGTTACATGACACTCATTTTATCCACAATTATTTGTTACATTGTTTACACCATTCATATAGAAAATTTTAACCTAATTTCACTTGAATATCTTTTTTCATAGTTGTGTTATTTTTTCTTCCACTTCTCCACTTCACTCATCCTAAACTAAAC

Coding sequence (CDS)

ATGGTTTACCACTCTAGTTTTGTTGATGAGGGAGGAGTAACAAAAGCTTGTGGTTGTCCACTACTTCCTTTGAAAAGCCATATCAAGGGTCCTGCTCCAGTTTCAGATCAAGAAAGCATTGATATTGTTGATGAAGCAATTACCTTTTTCCGCGCTAATGTCTTCTTCAGGAATTTCGACATAAAGAGCTCTGCCGATAAGCTGCTTATCTACTTGACATACTATGTCAATGTTGCTTTGAAGAGGCTTGAGGGATGCAGAACATTGGCTGAAGGTACCAAGGCCATTATTAATTTGGGTCTTGAGGAAGTTCCGGTGCCTGGAGAGTCTGGGTTTCCTTTCCCTGGTTTATTCACACCTCCTAAAGGCCATCAGGAAGCACTGTTATTCAGAAACTACCTGAAGCAGATAAGAGAAGAAACAAGTGGGAGATTACTGGGCGTTGCTTATCGACCTAATGGCACTCCAAATAAATGGTGGTTGGCATTTGCTAAGAGGAAATTTGTGAACATCATTGCACTGTAA

Protein sequence

MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTPPKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00467.1Spo00467.1mRNA


Homology
[Close]
BLAST of Spo00467.1 vs. NCBI nr
Match: gi|902180184|gb|KNA09494.1| (hypothetical protein SOVF_153040 [Spinacia oleracea])

HSP 1 Score: 362.5 bits (929), Expect = 4.200e-97
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP
Sbjct: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL
Sbjct: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 174
[Close]
BLAST of Spo00467.1 vs. NCBI nr
Match: gi|731352999|ref|XP_010687840.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 342.4 bits (877), Expect = 4.500e-91
Identity = 162/174 (93.10%), Postives = 168/174 (96.55%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GVTKACGCPLLPLKSHIKGPAPVSDQES DIVDE+ITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSDQESTDIVDESITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKSSADKLLIYLTYY+N+ALKRLEGCRTLAEGTKAIINLGLE+VPVPGE GFPFPGLF+P
Sbjct: 61  IKSSADKLLIYLTYYINIALKRLEGCRTLAEGTKAIINLGLEDVPVPGEPGFPFPGLFSP 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           PK HQEA LFRNYLKQIREETSGRLL VAYRPNGTPNKWWLAF+KRKFVNIIAL
Sbjct: 121 PKSHQEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFSKRKFVNIIAL 174
[Close]
BLAST of Spo00467.1 vs. NCBI nr
Match: gi|802666061|ref|XP_012081164.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 [Jatropha curcas])

HSP 1 Score: 324.3 bits (830), Expect = 1.300e-85
Identity = 153/174 (87.93%), Postives = 162/174 (93.10%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GV KACGCPLLPLKSHIKGPAPVSDQ+  DIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEEGVAKACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLAEGTKAIINLGLE VPVPGESGFPFPGLF  
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLENVPVPGESGFPFPGLFVN 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           P+  +EA LFRNYLKQ+REETSGRLL VAYRPNGTPNKWW+AFAKRKF+N+IAL
Sbjct: 121 PESQKEAELFRNYLKQMREETSGRLLSVAYRPNGTPNKWWIAFAKRKFMNVIAL 174
[Close]
BLAST of Spo00467.1 vs. NCBI nr
Match: gi|356562945|ref|XP_003549728.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 [Glycine max])

HSP 1 Score: 323.9 bits (829), Expect = 1.700e-85
Identity = 153/172 (88.95%), Postives = 163/172 (94.77%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFV+E GV++ACGCPLLPLKSHIKGPAPVSDQ+  DIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVNEDGVSRACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLAEGTKAIINLGLE+VPVPGESGFPFPGLF  
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFPL 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNII 173
           P+ H+EA LFRNYLKQIREETSGRLL VAYRPNGTPNKWWLAFAKRKF+NII
Sbjct: 121 PQSHKEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNII 172
[Close]
BLAST of Spo00467.1 vs. NCBI nr
Match: gi|1000943764|ref|XP_015581843.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 isoform X2 [Ricinus communis])

HSP 1 Score: 323.6 bits (828), Expect = 2.200e-85
Identity = 154/174 (88.51%), Postives = 162/174 (93.10%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GV KACGCPLLPLKSHIKGPAPVSDQ   DIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEEGVKKACGCPLLPLKSHIKGPAPVSDQGRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLAEGTKAIINLGLE+VPVPGESGFPFPGLF  
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFVN 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           P+  ++A LFRNYLKQIREETSGRLL VAYRPNGTPNKWWLAFAKRKF+N+IAL
Sbjct: 121 PESQKDAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNVIAL 174
[Close]
BLAST of Spo00467.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQE4_SPIOL (Actin-related protein 2/3 complex subunit 3 OS=Spinacia oleracea GN=SOVF_153040 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 3.000e-97
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP
Sbjct: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL
Sbjct: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 174
[Close]
BLAST of Spo00467.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BN72_BETVU (Actin-related protein 2/3 complex subunit 3 OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g193060 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.200e-91
Identity = 162/174 (93.10%), Postives = 168/174 (96.55%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GVTKACGCPLLPLKSHIKGPAPVSDQES DIVDE+ITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSDQESTDIVDESITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKSSADKLLIYLTYY+N+ALKRLEGCRTLAEGTKAIINLGLE+VPVPGE GFPFPGLF+P
Sbjct: 61  IKSSADKLLIYLTYYINIALKRLEGCRTLAEGTKAIINLGLEDVPVPGEPGFPFPGLFSP 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           PK HQEA LFRNYLKQIREETSGRLL VAYRPNGTPNKWWLAF+KRKFVNIIAL
Sbjct: 121 PKSHQEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFSKRKFVNIIAL 174
[Close]
BLAST of Spo00467.1 vs. UniProtKB/TrEMBL
Match: A0A067K2A9_JATCU (Actin-related protein 2/3 complex subunit 3 OS=Jatropha curcas GN=JCGZ_17009 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 8.900e-86
Identity = 153/174 (87.93%), Postives = 162/174 (93.10%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GV KACGCPLLPLKSHIKGPAPVSDQ+  DIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEEGVAKACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLAEGTKAIINLGLE VPVPGESGFPFPGLF  
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLENVPVPGESGFPFPGLFVN 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           P+  +EA LFRNYLKQ+REETSGRLL VAYRPNGTPNKWW+AFAKRKF+N+IAL
Sbjct: 121 PESQKEAELFRNYLKQMREETSGRLLSVAYRPNGTPNKWWIAFAKRKFMNVIAL 174
[Close]
BLAST of Spo00467.1 vs. UniProtKB/TrEMBL
Match: I1MU29_SOYBN (Actin-related protein 2/3 complex subunit 3 OS=Glycine max GN=GLYMA_17G108800 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.200e-85
Identity = 153/172 (88.95%), Postives = 163/172 (94.77%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFV+E GV++ACGCPLLPLKSHIKGPAPVSDQ+  DIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVNEDGVSRACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLAEGTKAIINLGLE+VPVPGESGFPFPGLF  
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFPL 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNII 173
           P+ H+EA LFRNYLKQIREETSGRLL VAYRPNGTPNKWWLAFAKRKF+NII
Sbjct: 121 PQSHKEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNII 172
[Close]
BLAST of Spo00467.1 vs. UniProtKB/TrEMBL
Match: V7CCQ3_PHAVU (Actin-related protein 2/3 complex subunit 3 OS=Phaseolus vulgaris GN=PHAVU_003G171200g PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.000e-85
Identity = 152/172 (88.37%), Postives = 163/172 (94.77%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFV+E GV++ACGCPLLPLKSHIKGPAPVSDQ++ DIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVNEDGVSRACGCPLLPLKSHIKGPAPVSDQDTTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+N+ALKRLEGCRTLAEGTKAIINLGLE+VPVPGESGFPF GLF P
Sbjct: 61  IKSPADKLLIYLTFYINIALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFAGLFPP 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNII 173
           P+  QEA LFRNYLKQIREETSGRLL VAYRPNGTPNKWWLAFAKRKF+NII
Sbjct: 121 PQSDQEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNII 172
[Close]
BLAST of Spo00467.1 vs. ExPASy Swiss-Prot
Match: ARPC3_ARATH (Actin-related protein 2/3 complex subunit 3 OS=Arabidopsis thaliana GN=ARPC3 PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 3.700e-85
Identity = 147/174 (84.48%), Postives = 160/174 (91.95%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GVTKACGCPLLPLKSHIKGPAPVS+Q+  DIVDEAITFFRANVFF NFD
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLA GTKAIINLGLE++PVPGE+GFPFPGLF+ 
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSL 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           P+   EA LFRNYLKQ+REETSGRLL VAYR NGTPNKWWLAFAKRKF+N++ L
Sbjct: 121 PQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVVL 174
[Close]
BLAST of Spo00467.1 vs. ExPASy Swiss-Prot
Match: ARPC3_BOVIN (Actin-related protein 2/3 complex subunit 3 OS=Bos taurus GN=ARPC3 PE=1 SV=3)

HSP 1 Score: 161.4 bits (407), Expect = 9.000e-39
Identity = 78/170 (45.88%), Postives = 112/170 (65.88%), Query Frame = 1 

		  

Query: 3   YHSSFVDEGGVTKACG-CPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFDI 62
           YHSS +D    TK  G   LLP++S  KGPAP   +++ DIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKDT-DIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTPP 122
           K+ AD+ LIY+T Y++  LK+L+ C + ++G K +  LG+   P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 KGHQEALLFRNYLKQIREETSGRLLGVAYRP-NGTPNKWWLAFAKRKFVN 171
              QE  + R YL+Q+R+ET  RL    + P N  P+KWW  F KR+F+N
Sbjct: 124 ANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170
[Close]
BLAST of Spo00467.1 vs. ExPASy Swiss-Prot
Match: ARPC3_HUMAN (Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens GN=ARPC3 PE=1 SV=3)

HSP 1 Score: 161.4 bits (407), Expect = 9.000e-39
Identity = 78/170 (45.88%), Postives = 112/170 (65.88%), Query Frame = 1 

		  

Query: 3   YHSSFVDEGGVTKACG-CPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFDI 62
           YHSS +D    TK  G   LLP++S  KGPAP   +++ DIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKDT-DIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTPP 122
           K+ AD+ LIY+T Y++  LK+L+ C + ++G K +  LG+   P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 KGHQEALLFRNYLKQIREETSGRLLGVAYRP-NGTPNKWWLAFAKRKFVN 171
              QE  + R YL+Q+R+ET  RL    + P N  P+KWW  F KR+F+N
Sbjct: 124 ANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170
[Close]
BLAST of Spo00467.1 vs. ExPASy Swiss-Prot
Match: ARPC3_MOUSE (Actin-related protein 2/3 complex subunit 3 OS=Mus musculus GN=Arpc3 PE=1 SV=3)

HSP 1 Score: 160.6 bits (405), Expect = 1.500e-38
Identity = 78/170 (45.88%), Postives = 112/170 (65.88%), Query Frame = 1 

		  

Query: 3   YHSSFVDEGGVTKACG-CPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFDI 62
           YHSS +D    TK  G   LLPL+S  KGPAP   +++ DIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPLRSQFKGPAPRETKDT-DIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTPP 122
           K+ AD+ LIY+T Y++  LK+L+ C + ++G K +  LG+   P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 KGHQEALLFRNYLKQIREETSGRLLGVAYRP-NGTPNKWWLAFAKRKFVN 171
              QE  + R YL+Q+R+ET  RL    + P +  P+KWW  F KR+F+N
Sbjct: 124 ASKQEDEMMRAYLQQLRQETGLRLCEKVFDPQSDKPSKWWTCFVKRQFMN 170
[Close]
BLAST of Spo00467.1 vs. ExPASy Swiss-Prot
Match: ARPC3_DICDI (Actin-related protein 2/3 complex subunit 3 OS=Dictyostelium discoideum GN=arcC PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.300e-34
Identity = 74/172 (43.02%), Postives = 101/172 (58.72%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACG-CPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNF 60
           MVYHS F DE    +  G  P+LPLK+  KGPAP  D  S+DI+DEA+  F+AN+ FRNF
Sbjct: 1   MVYHSQFNDESAGFRLVGNVPILPLKTTHKGPAPKGDANSVDIIDEALDLFKANILFRNF 60

Query: 61  DIKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFT 120
           +++ + D++LIYLT Y+   L ++      A+  KA+  +  E+  +PGES FP  GL T
Sbjct: 61  EVQGNGDRVLIYLTLYITKCLLKIAPMNK-ADAEKALFLIAQEQFSIPGESAFPLGGLVT 120

Query: 121 PPKGHQEALLFRNYLKQIREETSGRLLGVAYRPN-GTPNKWWLAFAKRKFVN 171
            P     A   R Y  Q+R E   RL    Y  +    NKWW+ F+KRKF+N
Sbjct: 121 VPNTRDAADTLRQYFTQLRLELGVRLCQRVYAVDPSKANKWWICFSKRKFLN 171
[Close]
BLAST of Spo00467.1 vs. TAIR (Arabidopsis)
Match: AT1G60430.1 (actin-related protein C3)

HSP 1 Score: 315.5 bits (807), Expect = 2.100e-86
Identity = 147/174 (84.48%), Postives = 160/174 (91.95%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GVTKACGCPLLPLKSHIKGPAPVS+Q+  DIVDEAITFFRANVFF NFD
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLA GTKAIINLGLE++PVPGE+GFPFPGLF+ 
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSL 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           P+   EA LFRNYLKQ+REETSGRLL VAYR NGTPNKWWLAFAKRKF+N++ L
Sbjct: 121 PQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVVL 174
The following BLAST results are available for this feature:
BLAST of Spo00467.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902180184|gb|KNA09494.1|4.2e-97100.hypothetical protein SOVF_1530... [more]
gi|731352999|ref|XP_010687840.1|4.5e-9193.1PREDICTED: actin-related prote... [more]
gi|802666061|ref|XP_012081164.1|1.3e-8587.9PREDICTED: actin-related prote... [more]
gi|356562945|ref|XP_003549728.1|1.7e-8588.9PREDICTED: actin-related prote... [more]
gi|1000943764|ref|XP_015581843.1|2.2e-8588.5PREDICTED: actin-related prote... [more]
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BLAST of Spo00467.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QQE4_SPIOL3.0e-97100.Actin-related protein 2/3 comp... [more]
A0A0J8BN72_BETVU3.2e-9193.1Actin-related protein 2/3 comp... [more]
A0A067K2A9_JATCU8.9e-8687.9Actin-related protein 2/3 comp... [more]
I1MU29_SOYBN1.2e-8588.9Actin-related protein 2/3 comp... [more]
V7CCQ3_PHAVU2.0e-8588.3Actin-related protein 2/3 comp... [more]
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BLAST of Spo00467.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ARPC3_ARATH3.7e-8584.4Actin-related protein 2/3 comp... [more]
ARPC3_BOVIN9.0e-3945.8Actin-related protein 2/3 comp... [more]
ARPC3_HUMAN9.0e-3945.8Actin-related protein 2/3 comp... [more]
ARPC3_MOUSE1.5e-3845.8Actin-related protein 2/3 comp... [more]
ARPC3_DICDI1.3e-3443.0Actin-related protein 2/3 comp... [more]
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BLAST of Spo00467.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G60430.12.1e-8684.4actin-related protein C3[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007204Actin-related protein 2/3 complex subunit 3GENE3D1.10.1760.10coord: 2..170
score: 6.0
IPR007204Actin-related protein 2/3 complex subunit 3PIRPIRSF016315p21-ARCcoord: 1..172
score: 9.4
IPR007204Actin-related protein 2/3 complex subunit 3PANTHERPTHR12391ARP2/3 COMPLEX 21 KD SUBUNITcoord: 1..171
score: 2.8E
IPR007204Actin-related protein 2/3 complex subunit 3PFAMPF04062P21-Arccoord: 2..170
score: 4.9
IPR007204Actin-related protein 2/3 complex subunit 3unknownSSF69060Arp2/3 complex 21 kDa subunit ARPC3coord: 2..170
score: 2.88
NoneNo IPR availablePANTHERPTHR12391:SF0ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 3coord: 1..171
score: 2.8E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034314 Arp2/3 complex-mediated actin nucleation
biological_process GO:0050826 response to freezing
biological_process GO:0009407 toxin catabolic process
biological_process GO:0006457 protein folding
biological_process GO:0006606 protein import into nucleus
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0016567 protein ubiquitination
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0009909 regulation of flower development
biological_process GO:0031060 regulation of histone methylation
biological_process GO:0010082 regulation of root meristem growth
biological_process GO:0032204 regulation of telomere maintenance
biological_process GO:0010332 response to gamma radiation
biological_process GO:0043687 post-translational protein modification
biological_process GO:0006396 RNA processing
biological_process GO:0048765 root hair cell differentiation
biological_process GO:0010162 seed dormancy process
biological_process GO:0009845 seed germination
biological_process GO:0048453 sepal formation
biological_process GO:0048443 stamen development
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0043247 telomere maintenance in response to DNA damage
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0030833 regulation of actin filament polymerization
biological_process GO:0000338 protein deneddylation
biological_process GO:0016579 protein deubiquitination
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0045010 actin nucleation
biological_process GO:0048440 carpel development
biological_process GO:0007155 cell adhesion
biological_process GO:0071555 cell wall organization
biological_process GO:0009640 photomorphogenesis
biological_process GO:0006306 DNA methylation
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0010338 leaf formation
biological_process GO:0010305 leaf vascular tissue pattern formation
biological_process GO:0019915 lipid storage
biological_process GO:0010074 maintenance of meristem identity
biological_process GO:0010014 meristem initiation
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0006312 mitotic recombination
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0048451 petal formation
biological_process GO:0010358 leaf shaping
cellular_component GO:0005885 Arp2/3 protein complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0042995 cell projection
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
cellular_component GO:0005856 cytoskeleton
molecular_function GO:0003779 actin binding
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0042393 histone binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0005515 protein binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo066670.72Barchart | Table
Spo235560.72Barchart | Table
Spo013970.72Barchart | Table
Spo222560.71Barchart | Table
Spo236790.71Barchart | Table
Spo097640.71Barchart | Table
Spo003970.70Barchart | Table
Spo173860.70Barchart | Table
Spo027310.70Barchart | Table
Spo131790.70Barchart | Table
Spo066790.69Barchart | Table
Spo051270.69Barchart | Table
Spo053540.69Barchart | Table
Spo140520.69Barchart | Table
Spo167590.69Barchart | Table
Spo173710.69Barchart | Table
Spo198740.69Barchart | Table
Spo229700.69Barchart | Table
Spo236640.69Barchart | Table
Spo085400.68Barchart | Table
Spo254970.68Barchart | Table
Spo000990.68Barchart | Table
Spo090620.68Barchart | Table
Spo126230.68Barchart | Table
Spo002990.68Barchart | Table
Spo010690.68Barchart | Table
Spo243090.68Barchart | Table
Spo036620.68Barchart | Table
Spo100170.67Barchart | Table
Spo069620.67Barchart | Table
Spo078820.67Barchart | Table
Spo085390.67Barchart | Table
Spo090150.67Barchart | Table
Spo024450.67Barchart | Table
Spo116410.67Barchart | Table
Spo121620.67Barchart | Table
Spo126630.67Barchart | Table
Spo134400.67Barchart | Table
Spo134910.67Barchart | Table
Spo149800.67Barchart | Table
Spo164310.67Barchart | Table
Spo170210.67Barchart | Table
Spo264820.67Barchart | Table
Spo017390.67Barchart | Table
Spo196350.67Barchart | Table
Spo217290.67Barchart | Table
Spo046630.67Barchart | Table
Spo244680.66Barchart | Table
Spo106730.66Barchart | Table
Spo108610.66Barchart | Table
Spo173400.66Barchart | Table
Spo235070.66Barchart | Table
Spo069050.66Barchart | Table
Spo119180.66Barchart | Table
Spo007380.66Barchart | Table
Spo090900.66Barchart | Table
Spo162970.66Barchart | Table
Spo018010.66Barchart | Table
Spo240660.66Barchart | Table
Spo240920.66Barchart | Table
Spo135160.66Barchart | Table
Spo184510.66Barchart | Table
Spo067290.66Barchart | Table
Spo197510.66Barchart | Table
Spo088130.66Barchart | Table
Spo214310.66Barchart | Table
Spo059550.66Barchart | Table
Spo075860.66Barchart | Table
Spo224420.66Barchart | Table
Spo227480.66Barchart | Table
Spo267380.66Barchart | Table
Spo096740.66Barchart | Table
Spo023470.66Barchart | Table
Spo071990.65Barchart | Table
Spo037160.65Barchart | Table
Spo171230.65Barchart | Table
Spo051240.65Barchart | Table
Spo173720.65Barchart | Table
Spo173910.65Barchart | Table
Spo265600.65Barchart | Table
Spo056030.65Barchart | Table
Spo230710.65Barchart | Table
Spo109940.65Barchart | Table
Spo116800.65Barchart | Table
Spo270440.65Barchart | Table