Spo00308 (gene)

Overview
NameSpo00308
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein
Locationchr5 : 5156177 .. 5159423 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTTCCTTACCAGTTTGTCCCCCATCTGTCATCTCCCTCTCTTTCTTTAATTAACCCCTTCTTCTTTCTCTCTCCTACCCTTCAATCTCTCTTTATAAGCACCCCACTATCTCACTTCCGCTCAATCAAAACACACCCACAAACACAAACAACCAAAAACAACAAAAAATGGATGTAAGTTTCCTCTCTGTTTAAATCAATTAATTTTCTTTCTAATTTCAATTTGGGGAAGAAGGGTGATTGAATTTGATGTTAATGCAACAGGATTACAGGTGGAATTACCATGTACCTGCATTTGGAAGCTGGGATTATGAAGATGAAAACATGGGATATACACAGTGTTTCGAGGGTGCAAGACAAGCTGGTTTTGCAAGGTTTGCAGCAACAGGTTACCCAGATTCTGCTGCTGATGTTGAAGACAGAGATTTGTATGTTGCTGGTGATTTGTACCAGAATGATGTTCTTACTCCTACTGTCATCGTTGTTCCTCGTCGCAGGGTACGTTTTTTTTAATTCATTAATCGTAGTTCCAACCTGGTAAATTAATAGTCTCACATACTATTCTGAAATATTTTATTGGATAACCCGGAAATTAATAGTCTCACATACTGTTATCTGAAATGTTTCATTAGGTATTCGATTCATTAATCATAGTTCCAAACTACGAAATTAATAGTCCCGCATACTATTTTGAAACTGAGATGTTATGTTGAAACTGAGATGTTATGTGGTTATGCTTACTTGTTTCTATGTTTTGGTAACAAATGTCCTTTTTATTTGCATCGATTTGAAACATAATCATGGATCTAGATTGCAATTTTACTAATTTCAATAATATTGAGTGTTTACCAAAAAAATAATATTGAGTGTTTTTGTAGTACTTATTTTTATTTTTTAAGATGATTTATTGATTAATGTAAAAATTGATGGTTTTATTGAATATACTTTGATTCAAAAATGTTCTTTTTATAAAGTCTTTACTGAAAATGCTTCCACTGTAAGTGTTGTTAGCCCCACTATCTGCATGCCACTATTTTTTGCTAAAAGCACAAACCAAAAAACATTCTTTTTTATTTTCTAAATAAAATAGGAACTTAAAAGTTGGACAAATAAGTTGATAAATGGAATTATCAATTGTTAAAATAAGGCAATTTCCAACAAAAATTTGTTAGTTTTAGTATAAGTTGACATATGGATTTGGGACTAATGCTTATGACGGTTACTTATGGCGATTTATGTGAGTAGACCCCAAATCATTTAGCACTAAGGTTTTGTTGGTAGTATAAGTTGACATACATATTCTAGTGTAATTCTAGCTAAGTGTTGATTGTTAGATACCGTTCATGTAGTCCATGTCACAATTAATTGAAAATGACTCAAATTGAAAAAAATGGATGGAATTTTAGAATTCGAAAACATATTAATTTTTTTCCTAATTGAGATACACTACCTTATACATAGATCATCATCTAATTGGTGTTATTGTAACGTTTAAGCCGATTCATTAAAACCGCTACTTAATAACCTGAATGGCAAACCAATAATGCCTTGGGCTAGTTGTTGTTAAACTAAGAGTTTGTGTACGATAAGTCACAAGTTTGAACCCTTTCCATGTCTGTAATTTGTACTGCCCGAATGAACGCGTGTTGAGTTTTAGATTTTTTTACTAGTCACCTTATTAACAACAAATCATGTTCATATTACAAGAAAATAGTAAATAATTAAGCATGTACTTAGGCATGGCATGCACCATGTTTCAAAAGCTATAGATAAAAAAGGTACAACAAGCTAGTGCTTTTCATCATGATGATTTTTGTTGAATAATAATTTTAAAATAATTTTCCTTAATTATTATGTTTAATTGTTGATTATGATGACAAATTGACAATTATTAGTGCTAAAAAACAGAGAAAAGGAGGATCAGGATACACAAATGTCAAAGGTGTAAAAAAACAGCAACAAAAAATGGAAAAAGAAGAATGGGGTGGATATTCATATGACATAAAGGAGCCACCAAGTCCAATTATCTCTCCACCAAAGCCAAAGCCAAAGCCAAAATCTAAGGCTGTTGATGAAGATTTGTACAAAATTCCTCCTGAATACCTCCATGTCAAACCCAAAAGGGTATTCTCCTTTTCTTTTCTTTTTTTTATATCCATTTTTGCTTTATTTTATCGTCTCTTACTTTTTCTTCGCCTTTTTATTTTCCGAAAAATAATACTTCGTAATTCAAGCCTTATTTCATACAAGTAGTACTCCGTAGTTTTTTTTCTTGCATAAATTATCCTTTACAAAAGACTAAGGGAAAAAGTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTCTACATTTTCGCTTTATTTTATCGTCTTCTTACTTTATCTCGCCTTTTTTATTTTCCAAAAAATAATAATTCAAGCCTTATATCATACAACTAGTAGTTTTTTTTTCTTGCATAAATTATCCTTTACAAAAGACTAAAGGGGAAAGTTTTTTTTTTATTTTTATAATTTGCTTTTTATCCCCTCCTAATTTTTTTTTGTTTTGTTTTGCAGAAGAAAGGATTCGGGCTATTTTCAAGTTGTTTGCTTCCCGCTTGTGCTTAATCTTTCGCATTAGATATAATTATGGTTTATTTATCGATATAGTAGTAGTTGTAGACTTGTAGTAGTGTTACAAGCCTATGGAATTGGAAGAGAAATTTTAGTATTTCGGCGAAATATTATCATGAGAATTAAGTATGTTGGTATTGAGCTAATGAGGAATTAATTGTGTAAGAGAGGCGATATTATTTCGAATATTTCCCCATAATTATAGATGGGAGTAATATTTTTCTTCCAATTAGGCTATTTGTAAAAAGAAAAAAAGTTGTTGAAGAAATTGATATTTATTTAATGGGTTTGTATGAGTTAGGCAAATTAATTCAAATTTATGGAATGGGTTGTAATATTTTCCTTTCAATTAGGCTAATTTAAATTTATGGAATTGGAAGAGAAATTTTATTTTATTTTGTTGTCATAGGATAAATTTGCATCAAGTGAAGTTACATAGCACGGAAGTTACATAGCACGGAGTACAAACTAAACC

mRNA sequence

ACTTTCCTTACCAGTTTGTCCCCCATCTGTCATCTCCCTCTCTTTCTTTAATTAACCCCTTCTTCTTTCTCTCTCCTACCCTTCAATCTCTCTTTATAAGCACCCCACTATCTCACTTCCGCTCAATCAAAACACACCCACAAACACAAACAACCAAAAACAACAAAAAATGGATGATTACAGGTGGAATTACCATGTACCTGCATTTGGAAGCTGGGATTATGAAGATGAAAACATGGGATATACACAGTGTTTCGAGGGTGCAAGACAAGCTGGTTTTGCAAGGTTTGCAGCAACAGGTTACCCAGATTCTGCTGCTGATGTTGAAGACAGAGATTTGTATGTTGCTGGTGATTTGTACCAGAATGATGTTCTTACTCCTACTGTCATCGTTGTTCCTCGTCGCAGGAGAAAAGGAGGATCAGGATACACAAATGTCAAAGGTGTAAAAAAACAGCAACAAAAAATGGAAAAAGAAGAATGGGGTGGATATTCATATGACATAAAGGAGCCACCAAGTCCAATTATCTCTCCACCAAAGCCAAAGCCAAAGCCAAAATCTAAGGCTGTTGATGAAGATTTGTACAAAATTCCTCCTGAATACCTCCATGTCAAACCCAAAAGGAAGAAAGGATTCGGGCTATTTTCAAGTTGTTTGCTTCCCGCTTGTGCTTAATCTTTCGCATTAGATATAATTATGGTTTATTTATCGATATAGTAGTAGTTGTAGACTTGTAGTAGTGTTACAAGCCTATGGAATTGGAAGAGAAATTTTAGTATTTCGGCGAAATATTATCATGAGAATTAAGTATGTTGGTATTGAGCTAATGAGGAATTAATTGTGTAAGAGAGGCGATATTATTTCGAATATTTCCCCATAATTATAGATGGGAGTAATATTTTTCTTCCAATTAGGCTATTTGTAAAAAGAAAAAAAGTTGTTGAAGAAATTGATATTTATTTAATGGGTTTGTATGAGTTAGGCAAATTAATTCAAATTTATGGAATGGGTTGTAATATTTTCCTTTCAATTAGGCTAATTTAAATTTATGGAATTGGAAGAGAAATTTTATTTTATTTTGTTGTCATAGGATAAATTTGCATCAAGTGAAGTTACATAGCACGGAAGTTACATAGCACGGAGTACAAACTAAACC

Coding sequence (CDS)

ATGGATGATTACAGGTGGAATTACCATGTACCTGCATTTGGAAGCTGGGATTATGAAGATGAAAACATGGGATATACACAGTGTTTCGAGGGTGCAAGACAAGCTGGTTTTGCAAGGTTTGCAGCAACAGGTTACCCAGATTCTGCTGCTGATGTTGAAGACAGAGATTTGTATGTTGCTGGTGATTTGTACCAGAATGATGTTCTTACTCCTACTGTCATCGTTGTTCCTCGTCGCAGGAGAAAAGGAGGATCAGGATACACAAATGTCAAAGGTGTAAAAAAACAGCAACAAAAAATGGAAAAAGAAGAATGGGGTGGATATTCATATGACATAAAGGAGCCACCAAGTCCAATTATCTCTCCACCAAAGCCAAAGCCAAAGCCAAAATCTAAGGCTGTTGATGAAGATTTGTACAAAATTCCTCCTGAATACCTCCATGTCAAACCCAAAAGGAAGAAAGGATTCGGGCTATTTTCAAGTTGTTTGCTTCCCGCTTGTGCTTAA

Protein sequence

MDDYRWNYHVPAFGSWDYEDENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVAGDLYQNDVLTPTVIVVPRRRRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPIISPPKPKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPACA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00308.1Spo00308.1mRNA


Homology
[Close]
BLAST of Spo00308.1 vs. NCBI nr
Match: gi|902191850|gb|KNA11931.1| (hypothetical protein SOVF_130580 [Spinacia oleracea])

HSP 1 Score: 352.4 bits (903), Expect = 4.200e-94
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 1 

		  

Query: 1   MDDYRWNYHVPAFGSWDYEDENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVA 60
           MDDYRWNYHVPAFGSWDY+DENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVA
Sbjct: 1   MDDYRWNYHVPAFGSWDYDDENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVA 60

Query: 61  GDLYQNDVLTPTVIVVPRRRRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPII 120
           GDLYQNDVLTPTVIVVPRRRRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPII
Sbjct: 61  GDLYQNDVLTPTVIVVPRRRRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPII 120

Query: 121 SPPKPKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPACA 169
           SPPKPKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPACA
Sbjct: 121 SPPKPKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPACA 168
[Close]
BLAST of Spo00308.1 vs. NCBI nr
Match: gi|731335857|ref|XP_010678945.1| (PREDICTED: uncharacterized protein LOC104894421 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 269.6 bits (688), Expect = 3.600e-69
Identity = 135/169 (79.88%), Postives = 145/169 (85.80%), Query Frame = 1 

		  

Query: 1   MDDYRWNYHVPAFGSWDYEDENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVA 60
           MD+YRWNYHVPAFGSWDYED N+ YTQCFE ARQ GF RF   GY  S ADVE RDLYVA
Sbjct: 1   MDEYRWNYHVPAFGSWDYEDGNLPYTQCFESARQTGFGRFG--GY--SEADVEHRDLYVA 60

Query: 61  GDLYQNDVLTPTVIVVPRR-RRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPI 120
           GDLYQND++TP VI+VPRR RRKG SGY+NVKGVKKQQQ M+K++WGGYSYDIKEPPSPI
Sbjct: 61  GDLYQNDIVTPAVILVPRRSRRKGESGYSNVKGVKKQQQIMQKQDWGGYSYDIKEPPSPI 120

Query: 121 ISPPKPKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPACA 169
           +SPPK K KP    VDEDLYKIPPEYLHVKPKRKK  GLFSSCLLPACA
Sbjct: 121 LSPPKSKSKP----VDEDLYKIPPEYLHVKPKRKKRLGLFSSCLLPACA 161
[Close]
BLAST of Spo00308.1 vs. NCBI nr
Match: gi|731335855|ref|XP_010678944.1| (PREDICTED: uncharacterized protein LOC104894421 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 267.7 bits (683), Expect = 1.400e-68
Identity = 134/170 (78.82%), Postives = 145/170 (85.29%), Query Frame = 1 

		  

Query: 1   MDDYRWNYHVPAFGSWDYEDENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVA 60
           MD+YRWNYHVPAFGSWDYED N+ YTQCFE ARQ GF RF   GY  S ADVE RDLYVA
Sbjct: 1   MDEYRWNYHVPAFGSWDYEDGNLPYTQCFESARQTGFGRFG--GY--SEADVEHRDLYVA 60

Query: 61  GDLYQNDVLTPTVIVVPRR--RRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSP 120
           GDLYQND++TP VI+VPRR  +RKG SGY+NVKGVKKQQQ M+K++WGGYSYDIKEPPSP
Sbjct: 61  GDLYQNDIVTPAVILVPRRSRQRKGESGYSNVKGVKKQQQIMQKQDWGGYSYDIKEPPSP 120

Query: 121 IISPPKPKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPACA 169
           I+SPPK K KP    VDEDLYKIPPEYLHVKPKRKK  GLFSSCLLPACA
Sbjct: 121 ILSPPKSKSKP----VDEDLYKIPPEYLHVKPKRKKRLGLFSSCLLPACA 162
[Close]
BLAST of Spo00308.1 vs. NCBI nr
Match: gi|1021037601|gb|KZM95384.1| (hypothetical protein DCAR_018626 [Daucus carota subsp. sativus])

HSP 1 Score: 162.5 bits (410), Expect = 6.200e-37
Identity = 89/159 (55.97%), Postives = 112/159 (70.44%), Query Frame = 1 

		  

Query: 9   HVPAFGSWDYEDENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVAGDLYQNDV 68
           HVPAFGSWD  D+ + +TQCFE ARQAG  R++ +         +DRDLYV GDLYQNDV
Sbjct: 9   HVPAFGSWDCNDD-LPFTQCFESARQAGLLRYSYS---------QDRDLYVTGDLYQNDV 68

Query: 69  LTPTVIVVPRRRRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPIISPPKPKPK 128
           +TP +IVVPRRR KGG  Y +VK  KK+   + + E+  Y +D+KEPPSP+ + P P+  
Sbjct: 69  VTPAMIVVPRRRAKGG--YPHVKEGKKEGWVVCECEYE-YEHDVKEPPSPVPNAPPPRKA 128

Query: 129 PKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPAC 168
           P  KAVDEDLYKI P+ L+   KRK+GFGLFS CL P+C
Sbjct: 129 P--KAVDEDLYKISPDLLYASSKRKRGFGLFSCCLRPSC 152
[Close]
BLAST of Spo00308.1 vs. NCBI nr
Match: gi|590713307|ref|XP_007049605.1| (Uncharacterized protein TCM_002679 [Theobroma cacao])

HSP 1 Score: 156.0 bits (393), Expect = 5.800e-35
Identity = 88/168 (52.38%), Postives = 109/168 (64.88%), Query Frame = 1 

		  

Query: 1   MDDYRWNYHVPAFGSWDYEDENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVA 60
           MDD+    HVPAFGSWD+ ++ + +TQCFE ARQAG  R++ +         EDRDLYVA
Sbjct: 1   MDDFYRRSHVPAFGSWDWNND-LPFTQCFESARQAGLLRYSYS---------EDRDLYVA 60

Query: 61  GDLYQNDVLTPTVIVVPRRRRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPII 120
           GDLY+NDV+TP +IVVPRRR K    +  VK  KKQ  ++          D+KEP SP  
Sbjct: 61  GDLYENDVVTPAMIVVPRRRTKVRQSH--VKEGKKQNWEVS---------DVKEPASPT- 120

Query: 121 SPPKPKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPACA 169
               P P+P  K VDEDLYKI PE L+ KPK+K+G G FSSCL+P CA
Sbjct: 121 ----PLPRPTPKPVDEDLYKISPELLYAKPKKKRGLGFFSSCLVPTCA 142
[Close]
BLAST of Spo00308.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZF1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_130580 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 3.000e-94
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 1 

		  

Query: 1   MDDYRWNYHVPAFGSWDYEDENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVA 60
           MDDYRWNYHVPAFGSWDY+DENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVA
Sbjct: 1   MDDYRWNYHVPAFGSWDYDDENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVA 60

Query: 61  GDLYQNDVLTPTVIVVPRRRRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPII 120
           GDLYQNDVLTPTVIVVPRRRRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPII
Sbjct: 61  GDLYQNDVLTPTVIVVPRRRRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPII 120

Query: 121 SPPKPKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPACA 169
           SPPKPKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPACA
Sbjct: 121 SPPKPKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPACA 168
[Close]
BLAST of Spo00308.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CDN3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g118410 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.500e-69
Identity = 135/169 (79.88%), Postives = 145/169 (85.80%), Query Frame = 1 

		  

Query: 1   MDDYRWNYHVPAFGSWDYEDENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVA 60
           MD+YRWNYHVPAFGSWDYED N+ YTQCFE ARQ GF RF   GY  S ADVE RDLYVA
Sbjct: 1   MDEYRWNYHVPAFGSWDYEDGNLPYTQCFESARQTGFGRFG--GY--SEADVEHRDLYVA 60

Query: 61  GDLYQNDVLTPTVIVVPRR-RRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPI 120
           GDLYQND++TP VI+VPRR RRKG SGY+NVKGVKKQQQ M+K++WGGYSYDIKEPPSPI
Sbjct: 61  GDLYQNDIVTPAVILVPRRSRRKGESGYSNVKGVKKQQQIMQKQDWGGYSYDIKEPPSPI 120

Query: 121 ISPPKPKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPACA 169
           +SPPK K KP    VDEDLYKIPPEYLHVKPKRKK  GLFSSCLLPACA
Sbjct: 121 LSPPKSKSKP----VDEDLYKIPPEYLHVKPKRKKRLGLFSSCLLPACA 161
[Close]
BLAST of Spo00308.1 vs. UniProtKB/TrEMBL
Match: A0A164Z5W4_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018626 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.300e-37
Identity = 89/159 (55.97%), Postives = 112/159 (70.44%), Query Frame = 1 

		  

Query: 9   HVPAFGSWDYEDENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVAGDLYQNDV 68
           HVPAFGSWD  D+ + +TQCFE ARQAG  R++ +         +DRDLYV GDLYQNDV
Sbjct: 9   HVPAFGSWDCNDD-LPFTQCFESARQAGLLRYSYS---------QDRDLYVTGDLYQNDV 68

Query: 69  LTPTVIVVPRRRRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPIISPPKPKPK 128
           +TP +IVVPRRR KGG  Y +VK  KK+   + + E+  Y +D+KEPPSP+ + P P+  
Sbjct: 69  VTPAMIVVPRRRAKGG--YPHVKEGKKEGWVVCECEYE-YEHDVKEPPSPVPNAPPPRKA 128

Query: 129 PKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPAC 168
           P  KAVDEDLYKI P+ L+   KRK+GFGLFS CL P+C
Sbjct: 129 P--KAVDEDLYKISPDLLYASSKRKRGFGLFSCCLRPSC 152
[Close]
BLAST of Spo00308.1 vs. UniProtKB/TrEMBL
Match: A0A061DMX9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002679 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.100e-35
Identity = 88/168 (52.38%), Postives = 109/168 (64.88%), Query Frame = 1 

		  

Query: 1   MDDYRWNYHVPAFGSWDYEDENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVA 60
           MDD+    HVPAFGSWD+ ++ + +TQCFE ARQAG  R++ +         EDRDLYVA
Sbjct: 1   MDDFYRRSHVPAFGSWDWNND-LPFTQCFESARQAGLLRYSYS---------EDRDLYVA 60

Query: 61  GDLYQNDVLTPTVIVVPRRRRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPII 120
           GDLY+NDV+TP +IVVPRRR K    +  VK  KKQ  ++          D+KEP SP  
Sbjct: 61  GDLYENDVVTPAMIVVPRRRTKVRQSH--VKEGKKQNWEVS---------DVKEPASPT- 120

Query: 121 SPPKPKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPACA 169
               P P+P  K VDEDLYKI PE L+ KPK+K+G G FSSCL+P CA
Sbjct: 121 ----PLPRPTPKPVDEDLYKISPELLYAKPKKKRGLGFFSSCLVPTCA 142
[Close]
BLAST of Spo00308.1 vs. UniProtKB/TrEMBL
Match: A0A166CIG4_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_012692 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.300e-33
Identity = 84/163 (51.53%), Postives = 104/163 (63.80%), Query Frame = 1 

		  

Query: 9   HVPAFGSWDYEDENMGYTQCFEGARQAGFARFAATGYPDSAADVEDRDLYVAGDLYQNDV 68
           HVPAFGSWD  D+ + +TQCFE ARQAG  R++ +         EDRDLYVAGDLYQND+
Sbjct: 52  HVPAFGSWDCNDD-LPFTQCFESARQAGLLRYSYS---------EDRDLYVAGDLYQNDI 111

Query: 69  LTPTVIVVPRRRRKGGSGYTNVKGVKKQQQKMEKEEWG----GYSYDIKEPPSPIISPPK 128
           +TP +IVVPRRR K  +G              +KE W      + YD+K+PPSP+ +   
Sbjct: 112 VTPAMIVVPRRRTKAAAG--------------KKEGWVVCECEHKYDVKQPPSPV-AHHA 171

Query: 129 PKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPAC 168
           P P    KAVDEDLYKI P+ L+   KRK+GFGLFS CL P+C
Sbjct: 172 PPPTYLPKAVDEDLYKISPDLLYANSKRKRGFGLFSCCLRPSC 189
[Close]
BLAST of Spo00308.1 vs. TAIR (Arabidopsis)
Match: AT5G48500.1 (unknown protein)

HSP 1 Score: 109.4 bits (272), Expect = 2.200e-24
Identity = 73/163 (44.79%), Postives = 94/163 (57.67%), Query Frame = 1 

		  

Query: 9   HVPAFGSWDYEDENMGYTQCFEGA--RQAGFARFAATGYPDSAADVEDRDLYVAGDLYQN 68
           HVPAFGSWD+ D  + +TQCFE A  +Q  F  +A+  YP      +DRDLY+AGDLY N
Sbjct: 15  HVPAFGSWDWNDA-VPFTQCFETATTQQPAFLHYAS--YP------QDRDLYLAGDLYDN 74

Query: 69  -DVLTPTVIVVPRRRRKGGSGYTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPIISPPKP 128
             ++ P VI+VPRRR K G      K    +QQ   K E   ++  +   P+P++     
Sbjct: 75  HHLVAPAVIIVPRRRAKVGQEPAEKKRNVSKQQHNYKTEAREFNAPV-SCPTPVVKRRMK 134

Query: 129 KPKPKSKAVDEDLYKIPPEYLHVKPKRKK---GFGLFSSCLLP 166
            PKP    VDEDLYK+ P+ L VK KRK+   GFG  S C LP
Sbjct: 135 APKP----VDEDLYKVSPQLLSVKSKRKRGGGGFGCISRCFLP 163
[Close]
BLAST of Spo00308.1 vs. TAIR (Arabidopsis)
Match: AT5G18310.2 (unknown protein)

HSP 1 Score: 48.1 bits (113), Expect = 6.000e-6
Identity = 48/166 (28.92%), Postives = 71/166 (42.77%), Query Frame = 1 

		  

Query: 10  VPAFGSWDYEDENMGYTQCFEGARQAGFAR--FAATGYPDSAADVEDRDLYVAGDLYQND 69
           +P FG W+  +E M  TQ FE  RQAG  R  +  T    S           + +  +  
Sbjct: 16  IPRFGEWEEANE-MPITQYFENPRQAGLIRHQYTTTSSASSTTTSSSSSSSSSAEALKLA 75

Query: 70  VLTPTVIVVPRRRRKGGSG-----YTNVKGVKKQQQKMEKEEWGGYSYDIKEPPSPIISP 129
              P    +  +R+  G+         V+ V  Q  K   +  G   +  K   +    P
Sbjct: 76  SHHPRPRHLHAQRQTAGTKEKRGPQRRVRDVSAQSDKYYIDVNGVKQF--KNDVALTCKP 135

Query: 130 PKPKPKPKSKAVDEDLYKIPPEYLHVKPKRKKGFGLFSSCLLPACA 169
           PKP        VDEDLYKIPPE++H   ++++    F +CL+P CA
Sbjct: 136 PKP--------VDEDLYKIPPEFIHSSTRKRR--PSFLACLVP-CA 167
The following BLAST results are available for this feature:
BLAST of Spo00308.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902191850|gb|KNA11931.1|4.2e-9499.4hypothetical protein SOVF_1305... [more]
gi|731335857|ref|XP_010678945.1|3.6e-6979.8PREDICTED: uncharacterized pro... [more]
gi|731335855|ref|XP_010678944.1|1.4e-6878.8PREDICTED: uncharacterized pro... [more]
gi|1021037601|gb|KZM95384.1|6.2e-3755.9hypothetical protein DCAR_0186... [more]
gi|590713307|ref|XP_007049605.1|5.8e-3552.3Uncharacterized protein TCM_00... [more]
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BLAST of Spo00308.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QZF1_SPIOL3.0e-9499.4Uncharacterized protein OS=Spi... [more]
A0A0J8CDN3_BETVU2.5e-6979.8Uncharacterized protein OS=Bet... [more]
A0A164Z5W4_DAUCA4.3e-3755.9Uncharacterized protein OS=Dau... [more]
A0A061DMX9_THECC4.1e-3552.3Uncharacterized protein OS=The... [more]
A0A166CIG4_DAUCA1.3e-3351.5Uncharacterized protein OS=Dau... [more]
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BLAST of Spo00308.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo00308.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G48500.12.2e-2444.7unknown protein[more]
AT5G18310.26.0e-628.9unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33699FAMILY NOT NAMEDcoord: 1..168
score: 1.4
NoneNo IPR availablePANTHERPTHR33699:SF2SUBFAMILY NOT NAMEDcoord: 1..168
score: 1.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031047 gene silencing by RNA
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo003890.78Barchart | Table
Spo020130.76Barchart | Table
Spo250130.76Barchart | Table
Spo007830.75Barchart | Table
Spo141720.74Barchart | Table
Spo105510.74Barchart | Table
Spo076940.73Barchart | Table
Spo002990.72Barchart | Table
Spo105500.72Barchart | Table
Spo242940.72Barchart | Table
Spo076000.72Barchart | Table
Spo171230.72Barchart | Table
Spo022540.72Barchart | Table
Spo183300.71Barchart | Table
Spo013970.71Barchart | Table
Spo031970.71Barchart | Table
Spo154200.71Barchart | Table
Spo153620.71Barchart | Table
Spo208260.71Barchart | Table
Spo021150.71Barchart | Table
Spo010480.71Barchart | Table
Spo158740.71Barchart | Table
Spo028840.71Barchart | Table
Spo208520.70Barchart | Table
Spo107930.70Barchart | Table
Spo072910.70Barchart | Table
Spo092610.70Barchart | Table
Spo001730.69Barchart | Table
Spo085410.69Barchart | Table
Spo219670.69Barchart | Table
Spo140840.69Barchart | Table
Spo116410.69Barchart | Table
Spo103990.69Barchart | Table
Spo005810.69Barchart | Table
Spo101640.69Barchart | Table
Spo062910.68Barchart | Table
Spo017510.68Barchart | Table
Spo018010.68Barchart | Table
Spo049330.68Barchart | Table
Spo049730.68Barchart | Table
Spo056310.68Barchart | Table
Spo149560.68Barchart | Table
Spo149800.68Barchart | Table
Spo209900.68Barchart | Table
Spo218280.68Barchart | Table
Spo221460.68Barchart | Table
Spo227500.68Barchart | Table
Spo234340.68Barchart | Table
Spo235070.68Barchart | Table
Spo268000.68Barchart | Table
Spo037350.67Barchart | Table
Spo224580.67Barchart | Table
Spo066010.67Barchart | Table
Spo107760.67Barchart | Table
Spo146390.67Barchart | Table
Spo093500.67Barchart | Table
Spo149190.67Barchart | Table
Spo089630.67Barchart | Table
Spo092190.67Barchart | Table
Spo072310.67Barchart | Table
Spo100440.67Barchart | Table
Spo154100.67Barchart | Table
Spo016630.67Barchart | Table
Spo101620.67Barchart | Table
Spo204970.67Barchart | Table
Spo168040.67Barchart | Table
Spo083270.67Barchart | Table
Spo074150.67Barchart | Table
Spo201970.67Barchart | Table
Spo047260.67Barchart | Table
Spo173820.67Barchart | Table
Spo234630.67Barchart | Table
Spo122360.67Barchart | Table
Spo175890.67Barchart | Table
Spo201490.67Barchart | Table
Spo123640.67Barchart | Table
Spo229700.67Barchart | Table
Spo173860.66Barchart | Table
Spo175640.66Barchart | Table
Spo017060.66Barchart | Table
Spo189610.66Barchart | Table
Spo248610.66Barchart | Table
Spo089820.66Barchart | Table
Spo091450.66Barchart | Table
Spo096270.66Barchart | Table
Spo107620.66Barchart | Table
Spo038670.66Barchart | Table
Spo109400.66Barchart | Table
Spo111700.66Barchart | Table
Spo113490.66Barchart | Table
Spo114370.66Barchart | Table
Spo116230.66Barchart | Table
Spo116400.66Barchart | Table
Spo038650.66Barchart | Table
Spo117590.66Barchart | Table
Spo119930.66Barchart | Table
Spo129400.66Barchart | Table
Spo145890.66Barchart | Table
Spo146370.66Barchart | Table
Spo148260.66Barchart | Table
Spo005360.66Barchart | Table
Spo245490.66Barchart | Table
Spo150120.66Barchart | Table
Spo035960.66Barchart | Table
Spo025280.66Barchart | Table
Spo168810.66Barchart | Table
Spo168820.66Barchart | Table
Spo173400.66Barchart | Table
Spo216930.66Barchart | Table
Spo089690.66Barchart | Table
Spo011040.66Barchart | Table
Spo220520.66Barchart | Table
Spo227470.66Barchart | Table
Spo260370.66Barchart | Table
Spo078020.66Barchart | Table
Spo083550.66Barchart | Table
Spo085110.66Barchart | Table
Spo088840.66Barchart | Table
Spo063580.65Barchart | Table
Spo003970.65Barchart | Table
Spo036490.65Barchart | Table
Spo087180.65Barchart | Table
Spo095590.65Barchart | Table
Spo106180.65Barchart | Table
Spo263880.65Barchart | Table
Spo039500.65Barchart | Table
Spo265600.65Barchart | Table
Spo176770.65Barchart | Table
Spo021770.65Barchart | Table
Spo162970.65Barchart | Table
Spo206390.65Barchart | Table
Spo032050.65Barchart | Table
Spo011460.65Barchart | Table
Spo245660.65Barchart | Table
Spo239570.65Barchart | Table
Spo051920.65Barchart | Table
Spo098420.65Barchart | Table