Spo00116 (gene)

Overview
NameSpo00116
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRibulose bisphosphate carboxylase/oxygenase activase 1
Locationchr1 : 28104750 .. 28107539 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACTGCTGTCTCGACCGTTGGAGCTGCCACCAGGGCACCTGTAAGTGATCTTAACTGTCTACTTACTACTAGTTTTTAATTTTATCAGGAAACTTTACATGTTCAATTTCAGTAAATTCTATGATCAATATCACTTAGAACTGAGGTTTTTTTTGTTTGTGTTTGTGTGTGGTACATAAATAAGTTACGTGTTTTATAAACATAGGAAATTGGAGTAATTCGCGACAAATACTTGTATGTAGTAGTTAAAAGAAAAGAGGGAAAAGAAAATATATCATCTTTGTTACGTAGTACTTTATTACTCGGGTACTTGACATGTTCAACTATAGTAGATATTTGAATGTGTTCCTTAATTAGAAGAGATAGAACCACATATATATGGTTGTACACAATTAAGTATTTTGTTTACGCGCCCAGTGGAGTTGTAACAAGCTAAGTCAACTGATATAGATATGTGTGAATATGTGATAGATATGAAGCTGAAGTTGAATTTTTGAATATATGTTGAGGTTTGTAACAAGTTGAGTAATGTAGATACGTGTGTGATAAAAATATAGGCAATTGAACTTGATTGTTCGAATATATGCTAGGGTACTTGTTAGAGGAAGTCGAGTAATATAGATATGGGCCGGTTCTGGGGCGGCGCCGGGTGAGCGACGGAACAATTGAAGTTGAATGTTTGGATATATGTTGGGGATACTTGTAACAACAAGTGGAGTAATAGAGAGTGTGTGTGTGATATATATACAATTGAAGTTGAATGTTTGGATATATGTTGGGGATACTTGTAACAACAAGTGGAGTAATAGAGAGTGTGTGTGTGATATATATACAATTGAAGTTGAATGTTTGGATATATGTTGGGGATACTTGTAACAACAAGTGGAGTAATAGAGAGTGTGTGTGTGATATATGTGCAGTTGAACTTGAATGGGTCAAGCGCAGGGGCATCAGTCCCAACATCAGGTTTCTTGGGGAGCAGCTTAAAGAAGCATACAAATGTTAGATTCCCAAGCAGCTCCAGGACAACCTCAATGACCGTCAAGGCCGCCGAGAATGAGGAGAAGAACACCGACAAATGGGCTCATTTGGCTAAGGACTTTTCTGATGACCAACTTGACATCCGTAGGGGTAAGGGTATGGTTGACAGTCTCTTCCAAGCTCCTGCTGATGCCGGTACCCACGTTCCCATTCAGAGTTCCTTTGAATACGAGAGCCAAGGTCTTCGAAAGTAAGCCCACCTTACTACCTTACTACTTCATTTACAAATTTATTCTAGTACTAAATTAAAAGCTTTACATGAATTCAGGTACGACATTGACAACATGTTGGGTGACTTCTACATTGCCCCTGCCTTTATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCTTGAACTTGCCCAACATCAAGGTAACTTCAATTCGTATTAATTAATTAAATTATAGATTCGACTTTGATCATGATCAAATAGCTAATTTGTCATGGATTTGGTGATAATATATAGATACCACTCATCTTGGGTGTTTGGGGAGGCAAGGGTCAAGGTAAATCCTTCCAATGTGAGCTTGTGTTCGCCAAGTTAGGAATCAAGTGAGTAAAACCCTACTCTTCCTAATCCATTAATTAATTAATTAGTAACATAAAAAATGAATCAAATTTTATTGAATAATTTATTCTTGGTGACAGCCCCATCATGATGAGTGCCGGAGAATTGGAAAGTGGAAATGCAGGAGAGCCAGCTAAGTTGATCAGGCAAAGGTACCGTGAGGCAGCAGACTTGATTGCTAAGGGTAAGATGTGTGCTCTATTCATCAACGATCTGGACGCCGGTGCTGGACGTATGGGAGGCACCACCCAATACACCGTAAACAACCAGATGGTTAACGCCACACTCATGAACATTGCTGACAACCCAACCAATGTCCAACTCCCTGGTATGTACAACAAGCAGGACAATGCCCGTGTCCCCATCATTGTTACTGGTAACGATTTCTCCACCTTGTACGCTCCCCTTATCCGTGATGGTCGTATGGAGAAGTTCTACTGGGCTCCCACCCGTGAGGACCGTATTGGTGTCTGTACCGGTATTTTCAAGACTGACAAAGTTCCTGCAGAACACGTTGTTAAGCTCGTTGACGCCTTCCCTGGACAATCTATCGGTATAATGCTCAAACCCAGATATAATTAATAGAATTGTTGTTGTTGTTGTTGTTAAGTGATCTGACATGGGTTAATGTTGCAGACTTTTTCGGAGCGTTGAGGGCTCGTGTATACGACGATGAAGTAAGGAAGTGGGTTAATAGCGTAGGAGTGGACAATGTAGGAAAGAAGCTGGTGAACTCAAAGGATGGACCACCAGTGTTTGAGCAACCAGAAATGACCTTACAAAAGTTGATGGAGTACGGAAACATGCTTGTGCAAGAGCAAGAGAATGTCAAGAGAGTCCAACTTGCTGACCAGTACATGAGCTCGGCTGCACTTGGTGATGCCAACAAAGATGCCATTGACAGAGGAACTTTCTTCGGTTAAGTGTCCCTAACTTGGAGGTTTGCATCCCCCGTGTCGCGTAGCTAGTTTAACAGATACAAAACATTTCTGCAATTCTGCTATGTTATGGTACTAAGACAAATGTCCTGTTTTTTTTATGGTGTTGGGAATGTGCAGGCAAAGCAGCTCAGCAAGTAAGTTTGCCAGTTGCTCAAGGTTGTACAGACCCTGAGGCCAAAAACTATGATCCAACTGCAAGGAGTGATGATGGGAGCTGCACGTACAATTTGTAG

mRNA sequence

ATGGCTACTGCTGTCTCGACCGTTGGAGCTGCCACCAGGGCACCTTTGAACTTGAATGGGTCAAGCGCAGGGGCATCAGTCCCAACATCAGGTTTCTTGGGGAGCAGCTTAAAGAAGCATACAAATGTTAGATTCCCAAGCAGCTCCAGGACAACCTCAATGACCGTCAAGGCCGCCGAGAATGAGGAGAAGAACACCGACAAATGGGCTCATTTGGCTAAGGACTTTTCTGATGACCAACTTGACATCCGTAGGGGTAAGGGTATGGTTGACAGTCTCTTCCAAGCTCCTGCTGATGCCGGTACCCACGTTCCCATTCAGAGTTCCTTTGAATACGAGAGCCAAGGTCTTCGAAAGTACGACATTGACAACATGTTGGGTGACTTCTACATTGCCCCTGCCTTTATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCTTGAACTTGCCCAACATCAAGATACCACTCATCTTGGGTGTTTGGGGAGGCAAGGGTCAAGGTAAATCCTTCCAATGTGAGCTTGTGTTCGCCAAGTTAGGAATCAACCCCATCATGATGAGTGCCGGAGAATTGGAAAGTGGAAATGCAGGAGAGCCAGCTAAGTTGATCAGGCAAAGGTACCGTGAGGCAGCAGACTTGATTGCTAAGGGTAAGATGTGTGCTCTATTCATCAACGATCTGGACGCCGGTGCTGGACGTATGGGAGGCACCACCCAATACACCGTAAACAACCAGATGGTTAACGCCACACTCATGAACATTGCTGACAACCCAACCAATGTCCAACTCCCTGGTATGTACAACAAGCAGGACAATGCCCGTGTCCCCATCATTGTTACTGGTAACGATTTCTCCACCTTGTACGCTCCCCTTATCCGTGATGGTCGTATGGAGAAGTTCTACTGGGCTCCCACCCGTGAGGACCGTATTGGTGTCTGTACCGGTATTTTCAAGACTGACAAAGTTCCTGCAGAACACGTTGTTAAGCTCGTTGACGCCTTCCCTGGACAATCTATCGACTTTTTCGGAGCGTTGAGGGCTCGTGTATACGACGATGAAGTAAGGAAGTGGGTTAATAGCGTAGGAGTGGACAATGTAGGAAAGAAGCTGGTGAACTCAAAGGATGGACCACCAGTGTTTGAGCAACCAGAAATGACCTTACAAAAGTTGATGGAGTACGGAAACATGCTTGTGCAAGAGCAAGAGAATGTCAAGAGAGTCCAACTTGCTGACCAGTACATGAGCTCGGCTGCACTTGGTGATGCCAACAAAGATGCCATTGACAGAGGAACTTTCTTCGGCAAAGCAGCTCAGCAAGTAAGTTTGCCAGTTGCTCAAGGTTGTACAGACCCTGAGGCCAAAAACTATGATCCAACTGCAAGGAGTGATGATGGGAGCTGCACGTACAATTTGTAG

Coding sequence (CDS)

ATGGCTACTGCTGTCTCGACCGTTGGAGCTGCCACCAGGGCACCTTTGAACTTGAATGGGTCAAGCGCAGGGGCATCAGTCCCAACATCAGGTTTCTTGGGGAGCAGCTTAAAGAAGCATACAAATGTTAGATTCCCAAGCAGCTCCAGGACAACCTCAATGACCGTCAAGGCCGCCGAGAATGAGGAGAAGAACACCGACAAATGGGCTCATTTGGCTAAGGACTTTTCTGATGACCAACTTGACATCCGTAGGGGTAAGGGTATGGTTGACAGTCTCTTCCAAGCTCCTGCTGATGCCGGTACCCACGTTCCCATTCAGAGTTCCTTTGAATACGAGAGCCAAGGTCTTCGAAAGTACGACATTGACAACATGTTGGGTGACTTCTACATTGCCCCTGCCTTTATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCTTGAACTTGCCCAACATCAAGATACCACTCATCTTGGGTGTTTGGGGAGGCAAGGGTCAAGGTAAATCCTTCCAATGTGAGCTTGTGTTCGCCAAGTTAGGAATCAACCCCATCATGATGAGTGCCGGAGAATTGGAAAGTGGAAATGCAGGAGAGCCAGCTAAGTTGATCAGGCAAAGGTACCGTGAGGCAGCAGACTTGATTGCTAAGGGTAAGATGTGTGCTCTATTCATCAACGATCTGGACGCCGGTGCTGGACGTATGGGAGGCACCACCCAATACACCGTAAACAACCAGATGGTTAACGCCACACTCATGAACATTGCTGACAACCCAACCAATGTCCAACTCCCTGGTATGTACAACAAGCAGGACAATGCCCGTGTCCCCATCATTGTTACTGGTAACGATTTCTCCACCTTGTACGCTCCCCTTATCCGTGATGGTCGTATGGAGAAGTTCTACTGGGCTCCCACCCGTGAGGACCGTATTGGTGTCTGTACCGGTATTTTCAAGACTGACAAAGTTCCTGCAGAACACGTTGTTAAGCTCGTTGACGCCTTCCCTGGACAATCTATCGACTTTTTCGGAGCGTTGAGGGCTCGTGTATACGACGATGAAGTAAGGAAGTGGGTTAATAGCGTAGGAGTGGACAATGTAGGAAAGAAGCTGGTGAACTCAAAGGATGGACCACCAGTGTTTGAGCAACCAGAAATGACCTTACAAAAGTTGATGGAGTACGGAAACATGCTTGTGCAAGAGCAAGAGAATGTCAAGAGAGTCCAACTTGCTGACCAGTACATGAGCTCGGCTGCACTTGGTGATGCCAACAAAGATGCCATTGACAGAGGAACTTTCTTCGGCAAAGCAGCTCAGCAAGTAAGTTTGCCAGTTGCTCAAGGTTGTACAGACCCTGAGGCCAAAAACTATGATCCAACTGCAAGGAGTGATGATGGGAGCTGCACGTACAATTTGTAG

Protein sequence

MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00116.1Spo00116.1mRNA


Homology
[Close]
BLAST of Spo00116.1 vs. NCBI nr
Match: gi|12643998|sp|P10871.2|RCA_SPIOL (RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic; Short=RA; Short=RuBisCO activase; Flags: Precursor [Spinacia oleracea])

HSP 1 Score: 937.9 bits (2423), Expect = 6.600e-270
Identity = 469/472 (99.36%), Postives = 470/472 (99.58%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60
           MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE
Sbjct: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60

Query: 61  NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY 120
           NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY
Sbjct: 61  NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY 120

Query: 121 DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL 180
           DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL
Sbjct: 121 DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL 180

Query: 181 GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGTTQ 240
           GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDL+ GAGRMGGTTQ
Sbjct: 181 GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQ 240

Query: 241 YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK 300
           YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK
Sbjct: 241 YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK 300

Query: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVN 360
           FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVY DEVRKWVN
Sbjct: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVN 360

Query: 361 SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL 420
           SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL
Sbjct: 361 SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL 420

Query: 421 GDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 473
           GDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL
Sbjct: 421 GDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472
[Close]
BLAST of Spo00116.1 vs. NCBI nr
Match: gi|170129|gb|AAA34038.1| (rubisco activase precursor [Spinacia oleracea])

HSP 1 Score: 937.2 bits (2421), Expect = 1.100e-269
Identity = 468/472 (99.15%), Postives = 470/472 (99.58%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60
           MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE
Sbjct: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60

Query: 61  NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY 120
           NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY
Sbjct: 61  NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY 120

Query: 121 DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL 180
           DIDNMLGD YIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL
Sbjct: 121 DIDNMLGDLYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL 180

Query: 181 GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGTTQ 240
           GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDL+ GAGRMGGTTQ
Sbjct: 181 GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQ 240

Query: 241 YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK 300
           YTVNNQMVNATL+NIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK
Sbjct: 241 YTVNNQMVNATLLNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK 300

Query: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVN 360
           FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVN
Sbjct: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVN 360

Query: 361 SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL 420
           SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL
Sbjct: 361 SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL 420

Query: 421 GDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 473
           GDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL
Sbjct: 421 GDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472
[Close]
BLAST of Spo00116.1 vs. NCBI nr
Match: gi|902073914|gb|KNA02995.1| (hypothetical protein SOVF_213350 [Spinacia oleracea])

HSP 1 Score: 868.2 bits (2242), Expect = 6.500e-249
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60
           MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE
Sbjct: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60

Query: 61  NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY 120
           NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY
Sbjct: 61  NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY 120

Query: 121 DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL 180
           DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL
Sbjct: 121 DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL 180

Query: 181 GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGTTQ 240
           GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGTTQ
Sbjct: 181 GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGTTQ 240

Query: 241 YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK 300
           YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK
Sbjct: 241 YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK 300

Query: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVN 360
           FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVN
Sbjct: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVN 360

Query: 361 SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL 420
           SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL
Sbjct: 361 SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL 420

Query: 421 GDANKDAIDRGTFFG 436
           GDANKDAIDRGTFFG
Sbjct: 421 GDANKDAIDRGTFFG 435
[Close]
BLAST of Spo00116.1 vs. NCBI nr
Match: gi|4261547|gb|AAD13841.1|S45033_11 (rubisco activase [Spinacia oleracea])

HSP 1 Score: 862.1 bits (2226), Expect = 4.600e-247
Identity = 432/435 (99.31%), Postives = 433/435 (99.54%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60
           MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE
Sbjct: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60

Query: 61  NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY 120
           NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY
Sbjct: 61  NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY 120

Query: 121 DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL 180
           DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL
Sbjct: 121 DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL 180

Query: 181 GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGTTQ 240
           GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDL+ GAGRMGGTTQ
Sbjct: 181 GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQ 240

Query: 241 YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK 300
           YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK
Sbjct: 241 YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK 300

Query: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVN 360
           FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVY DEVRKWVN
Sbjct: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVN 360

Query: 361 SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL 420
           SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL
Sbjct: 361 SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL 420

Query: 421 GDANKDAIDRGTFFG 436
           GDANKDAIDRGTFFG
Sbjct: 421 GDANKDAIDRGTFFG 435
[Close]
BLAST of Spo00116.1 vs. NCBI nr
Match: gi|731315361|ref|XP_010691068.1| (PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 837.0 bits (2161), Expect = 1.600e-239
Identity = 414/474 (87.34%), Postives = 452/474 (95.36%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPS-SSRTTSMTVKAA 60
           MATAVSTVGAATRAPL+  GS+AGASVPTS FLGSSLKKHT+VRFPS SS+ +SMTVKAA
Sbjct: 1   MATAVSTVGAATRAPLS--GSNAGASVPTSAFLGSSLKKHTSVRFPSASSKASSMTVKAA 60

Query: 61  E-NEEKNT--DKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQG 120
           + +EEK T  DKWA LA+D SDDQLDIRRGKGMVD+LFQAP DAGTHVP+QS+FEYESQG
Sbjct: 61  DYSEEKQTKKDKWAGLAEDISDDQLDIRRGKGMVDTLFQAPMDAGTHVPVQSTFEYESQG 120

Query: 121 LRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELV 180
           LRKY+IDNMLG+FYIAPAFMDKLVVH+TKN+LNLPNIK+PLILG+WGGKGQGKSFQCELV
Sbjct: 121 LRKYNIDNMLGNFYIAPAFMDKLVVHVTKNYLNLPNIKVPLILGIWGGKGQGKSFQCELV 180

Query: 181 FAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMG 240
           FAK+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IAKGKMCALFINDLDAGAGRMG
Sbjct: 181 FAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIAKGKMCALFINDLDAGAGRMG 240

Query: 241 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDG 300
           GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDG
Sbjct: 241 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDG 300

Query: 301 RMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVR 360
           RMEKFYWAPTREDRIGVCTGIF+TD VP EHVVK+VD+FPGQSIDFFGALRARVYDDEVR
Sbjct: 301 RMEKFYWAPTREDRIGVCTGIFRTDNVPVEHVVKIVDSFPGQSIDFFGALRARVYDDEVR 360

Query: 361 KWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMS 420
           KWV+SVG+D +GKKLVNSKDGPPVFEQP+MTL+KL+EYGNMLVQEQENVKRVQLAD+Y++
Sbjct: 361 KWVSSVGIDAIGKKLVNSKDGPPVFEQPKMTLEKLLEYGNMLVQEQENVKRVQLADKYLN 420

Query: 421 SAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 471
            AALGDANKD+ID G FFG+AAQQ ++P+ +GCTDP AKN+DPTARSDDGSC Y
Sbjct: 421 EAALGDANKDSIDSGAFFGQAAQQGNIPIPEGCTDPNAKNFDPTARSDDGSCLY 472
[Close]
BLAST of Spo00116.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q765_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_213350 PE=4 SV=1)

HSP 1 Score: 868.2 bits (2242), Expect = 4.500e-249
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60
           MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE
Sbjct: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60

Query: 61  NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY 120
           NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY
Sbjct: 61  NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY 120

Query: 121 DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL 180
           DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL
Sbjct: 121 DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL 180

Query: 181 GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGTTQ 240
           GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGTTQ
Sbjct: 181 GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGTTQ 240

Query: 241 YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK 300
           YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK
Sbjct: 241 YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK 300

Query: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVN 360
           FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVN
Sbjct: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVN 360

Query: 361 SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL 420
           SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL
Sbjct: 361 SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL 420

Query: 421 GDANKDAIDRGTFFG 436
           GDANKDAIDRGTFFG
Sbjct: 421 GDANKDAIDRGTFFG 435
[Close]
BLAST of Spo00116.1 vs. UniProtKB/TrEMBL
Match: Q8L5T3_CHEQI (Rubisco activase OS=Chenopodium quinoa GN=rca PE=2 SV=1)

HSP 1 Score: 790.8 bits (2041), Expect = 9.100e-226
Identity = 390/438 (89.04%), Postives = 417/438 (95.21%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60
           MATAVSTVGAAT+APLNLNGSSAGASVPTS FLGSSLKKHT+VRFPSSSR +SMTVKAA+
Sbjct: 1   MATAVSTVGAATKAPLNLNGSSAGASVPTSAFLGSSLKKHTSVRFPSSSRASSMTVKAAD 60

Query: 61  NEEK---NTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGL 120
            EE    NTD+WAHLA D SDDQLDIRRGKGMVDSLFQAP D+GTHVP+QSS EYESQGL
Sbjct: 61  YEESKQSNTDRWAHLATDISDDQLDIRRGKGMVDSLFQAPMDSGTHVPVQSSLEYESQGL 120

Query: 121 RKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVF 180
           RKY+IDNMLG+FYIAP+FMDK+VVHITKN+LNLPNIK+PLILG+WGGKGQGKSFQCELVF
Sbjct: 121 RKYNIDNMLGNFYIAPSFMDKIVVHITKNYLNLPNIKVPLILGIWGGKGQGKSFQCELVF 180

Query: 181 AKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGG 240
           AK+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IAKGKMCALFINDLDAGAGRMGG
Sbjct: 181 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIAKGKMCALFINDLDAGAGRMGG 240

Query: 241 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGR 300
           TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQ+NARVPIIVTGNDFSTLYAPLIRDGR
Sbjct: 241 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGR 300

Query: 301 MEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRK 360
           MEKFYWAPTREDRIGV TGIF+TD VP +HVVKLVD FPGQSIDFFGALRARVYDDEVRK
Sbjct: 301 MEKFYWAPTREDRIGVATGIFRTDNVPEDHVVKLVDTFPGQSIDFFGALRARVYDDEVRK 360

Query: 361 WVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSS 420
           WV+ VG+D VGKKLVNS+DGPPVFEQP+MTL+KL+EYGNMLVQEQENVKRVQLAD+Y+S 
Sbjct: 361 WVSEVGIDAVGKKLVNSRDGPPVFEQPKMTLEKLLEYGNMLVQEQENVKRVQLADKYLSE 420

Query: 421 AALGDANKDAIDRGTFFG 436
           AALGDANKDAI  G FFG
Sbjct: 421 AALGDANKDAIASGAFFG 438
[Close]
BLAST of Spo00116.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CXP9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g025300 PE=4 SV=1)

HSP 1 Score: 780.4 bits (2014), Expect = 1.200e-222
Identity = 389/439 (88.61%), Postives = 421/439 (95.90%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPS-SSRTTSMTVKAA 60
           MATAVSTVGAATRAPL+  GS+AGASVPTS FLGSSLKKHT+VRFPS SS+ +SMTVKAA
Sbjct: 1   MATAVSTVGAATRAPLS--GSNAGASVPTSAFLGSSLKKHTSVRFPSASSKASSMTVKAA 60

Query: 61  E-NEEKNT--DKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQG 120
           + +EEK T  DKWA LA+D SDDQLDIRRGKGMVD+LFQAP DAGTHVP+QS+FEYESQG
Sbjct: 61  DYSEEKQTKKDKWAGLAEDISDDQLDIRRGKGMVDTLFQAPMDAGTHVPVQSTFEYESQG 120

Query: 121 LRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELV 180
           LRKY+IDNMLG+FYIAPAFMDKLVVH+TKN+LNLPNIK+PLILG+WGGKGQGKSFQCELV
Sbjct: 121 LRKYNIDNMLGNFYIAPAFMDKLVVHVTKNYLNLPNIKVPLILGIWGGKGQGKSFQCELV 180

Query: 181 FAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMG 240
           FAK+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IAKGKMCALFINDLDAGAGRMG
Sbjct: 181 FAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIAKGKMCALFINDLDAGAGRMG 240

Query: 241 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDG 300
           GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDG
Sbjct: 241 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDG 300

Query: 301 RMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVR 360
           RMEKFYWAPTREDRIGVCTGIF+TD VP EHVVK+VD+FPGQSIDFFGALRARVYDDEVR
Sbjct: 301 RMEKFYWAPTREDRIGVCTGIFRTDNVPVEHVVKIVDSFPGQSIDFFGALRARVYDDEVR 360

Query: 361 KWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMS 420
           KWV+SVG+D +GKKLVNSKDGPPVFEQP+MTL+KL+EYGNMLVQEQENVKRVQLAD+Y++
Sbjct: 361 KWVSSVGIDAIGKKLVNSKDGPPVFEQPKMTLEKLLEYGNMLVQEQENVKRVQLADKYLN 420

Query: 421 SAALGDANKDAIDRGTFFG 436
            AALGDANKD+ID G FFG
Sbjct: 421 EAALGDANKDSIDSGAFFG 437
[Close]
BLAST of Spo00116.1 vs. UniProtKB/TrEMBL
Match: B9SDY7_RICCO (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast, putative OS=Ricinus communis GN=RCOM_1480310 PE=4 SV=1)

HSP 1 Score: 762.3 bits (1967), Expect = 3.500e-217
Identity = 377/472 (79.87%), Postives = 415/472 (87.92%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60
           MA  +STVGA  R PL LNGS AG+SVPTS F GSSLKK  + RF   S + S  V +  
Sbjct: 1   MAATISTVGAVNRTPLALNGSGAGSSVPTSAFFGSSLKKLNSPRFSKFS-SGSFKVVSEY 60

Query: 61  NEEKNT--DKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLR 120
           +EEK T  D+W  LA D SDDQ DI RGKGMVDSLFQAP DAGTH  + SS+EY S GLR
Sbjct: 61  DEEKQTSADRWGGLAYDMSDDQQDITRGKGMVDSLFQAPQDAGTHYAVMSSYEYLSTGLR 120

Query: 121 KYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFA 180
           +Y++DN +  FYIAPAFMDKLVVHITKNF+ LPNIKIPLILG+WGGKGQGKSFQCELVFA
Sbjct: 121 QYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFA 180

Query: 181 KLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGT 240
           K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC LFINDLDAGAGRMGGT
Sbjct: 181 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGT 240

Query: 241 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRM 300
           TQYTVNNQMVNATLMNIADNPTNVQLPGMYNK++N RVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 241 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 300

Query: 301 EKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKW 360
           EKFYWAPTREDRIGVCTGIFKTD V  E VVKLVD FPGQSIDFFGALRARVYDDEVRKW
Sbjct: 301 EKFYWAPTREDRIGVCTGIFKTDGVAPEDVVKLVDTFPGQSIDFFGALRARVYDDEVRKW 360

Query: 361 VNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSA 420
           +  VGV+ +GK LVNSK+GPP FEQP+MT++KL+EYGNMLVQEQENVKRVQLAD+YMS A
Sbjct: 361 IGGVGVEKIGKSLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYMSEA 420

Query: 421 ALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 471
           ALG+AN+D+I+RGTF+GKAAQQV++PV +GCTDP A+N+DPTARSDDGSCTY
Sbjct: 421 ALGEANQDSIERGTFYGKAAQQVNIPVPEGCTDPTAQNFDPTARSDDGSCTY 471
[Close]
BLAST of Spo00116.1 vs. UniProtKB/TrEMBL
Match: M5X8A8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005158mg PE=4 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 2.500e-215
Identity = 376/473 (79.49%), Postives = 419/473 (88.58%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTT-SMTVKAA 60
           MATAVST+GA  RAPL+LNGSS+ ASVP+S FLGSSLKK  N RF +S  ++ S  + A 
Sbjct: 1   MATAVSTIGAVNRAPLSLNGSSSSASVPSSTFLGSSLKK-VNSRFTNSKVSSGSFRIVAE 60

Query: 61  ENEEKNTDK--WAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGL 120
            +E+K TDK  W  LA D SDDQ DI RGKGMVDSLFQAP DAGTH  + SS+EY S GL
Sbjct: 61  VDEDKQTDKDKWRGLAYDTSDDQQDITRGKGMVDSLFQAPQDAGTHFAVMSSYEYISTGL 120

Query: 121 RKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVF 180
           R+Y++DN +  FYIAPAFMDKLVVHITKNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF
Sbjct: 121 RQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVF 180

Query: 181 AKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGG 240
           AK+GI+PIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMCALFINDLDAGAGR+GG
Sbjct: 181 AKMGISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGG 240

Query: 241 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGR 300
           TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNK++N RVPIIVTGNDFSTLYAPLIRDGR
Sbjct: 241 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 300

Query: 301 MEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRK 360
           MEKFYWAPTREDRIGVC GIF++D V  E +VKLVD FPGQSIDFFGALRARVYDDEVRK
Sbjct: 301 MEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRK 360

Query: 361 WVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSS 420
           W+  VGVD VGK+LVNSK+GPP FEQP+MT++KL+EYGNMLVQEQENVKRVQLAD+Y+S 
Sbjct: 361 WITGVGVDGVGKRLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSE 420

Query: 421 AALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 471
           AALGDAN DAID GTF+GKAAQQV++PV +GCTD  A+N+DPTARSDDGSC Y
Sbjct: 421 AALGDANSDAIDSGTFYGKAAQQVNVPVPEGCTDRTAENFDPTARSDDGSCLY 472
[Close]
BLAST of Spo00116.1 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 937.9 bits (2423), Expect = 4.200e-272
Identity = 469/472 (99.36%), Postives = 470/472 (99.58%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60
           MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE
Sbjct: 1   MATAVSTVGAATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE 60

Query: 61  NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY 120
           NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY
Sbjct: 61  NEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKY 120

Query: 121 DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL 180
           DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL
Sbjct: 121 DIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKL 180

Query: 181 GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGTTQ 240
           GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDL+ GAGRMGGTTQ
Sbjct: 181 GINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQ 240

Query: 241 YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK 300
           YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK
Sbjct: 241 YTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEK 300

Query: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVN 360
           FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVY DEVRKWVN
Sbjct: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVN 360

Query: 361 SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL 420
           SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL
Sbjct: 361 SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL 420

Query: 421 GDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 473
           GDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL
Sbjct: 421 GDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472
[Close]
BLAST of Spo00116.1 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2)

HSP 1 Score: 733.0 bits (1891), Expect = 2.000e-210
Identity = 370/475 (77.89%), Postives = 410/475 (86.32%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGA-SVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKA- 60
           MA AVSTVGA  RAPL+LNGS +GA S P S FLG   K  T  RF  S++ ++ + K  
Sbjct: 1   MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGK--KVVTVSRFAQSNKKSNGSFKVL 60

Query: 61  AENEEKNTD--KWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQG 120
           A  E+K TD  +W  LA D SDDQ DI RGKGMVDS+FQAP   GTH  + SS+EY SQG
Sbjct: 61  AVKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQG 120

Query: 121 LRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELV 180
           LR+Y++DNM+  FYIAPAFMDKLVVHITKNFL LPNIK+PLILG+WGGKGQGKSFQCELV
Sbjct: 121 LRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELV 180

Query: 181 FAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMG 240
            AK+GINPIMMSAGELESGNAGEPAKLIRQRYREAADLI KGKMC LFINDLDAGAGRMG
Sbjct: 181 MAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMG 240

Query: 241 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDG 300
           GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNK++NARVPII TGNDFSTLYAPLIRDG
Sbjct: 241 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDG 300

Query: 301 RMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVR 360
           RMEKFYWAPTREDRIGVC GIF+TDK+  E +V LVD FPGQSIDFFGALRARVYDDEVR
Sbjct: 301 RMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVR 360

Query: 361 KWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMS 420
           K+V S+GV+ +GK+LVNS++GPPVFEQPEMT +KLMEYGNMLV EQENVKRVQLA+ Y+S
Sbjct: 361 KFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLS 420

Query: 421 SAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYN 472
            AALGDAN DAI RGTF+GK AQQV+LPV +GCTDP A+N+DPTARSDDG+C YN
Sbjct: 421 QAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYN 473
[Close]
BLAST of Spo00116.1 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=1 SV=1)

HSP 1 Score: 732.6 bits (1890), Expect = 2.700e-210
Identity = 369/475 (77.68%), Postives = 411/475 (86.53%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGAS-VPTSGFLGSSLKKHTNVRFPSSSRTTSMTV--K 60
           MA A STVGA  RAPL+LNGS A AS VP++ F GSSLKK    +FP +S      V  +
Sbjct: 1   MAAAYSTVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSA-AKFPKASSGNFKIVAQE 60

Query: 61  AAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGL 120
            +E+++ + DKW  LA D SDDQ DI RGKGMVD+LFQAP  +GTH  + SS++Y SQGL
Sbjct: 61  ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 120

Query: 121 RKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVF 180
           R+Y++DN +  FYIAPAFMDKLVVHITKNFL+LPNIKIPLILG+WGGKGQGKSFQCELVF
Sbjct: 121 RQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVF 180

Query: 181 AKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGG 240
           AK+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC LFINDLDAGAGRMGG
Sbjct: 181 AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGG 240

Query: 241 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGR 300
           TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNK++N RVPIIVTGNDFSTLYAPLIRDGR
Sbjct: 241 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 300

Query: 301 MEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRK 360
           MEKFYWAPTREDRIGVC GIF+TD V  + +VKLVD FPGQSIDFFGALRARVY DEVRK
Sbjct: 301 MEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRK 360

Query: 361 WVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSS 420
           WV+ VGVD +GKKLVNSK+GPP FEQP+MT+ KL+ YG MLVQEQENVKRVQLAD+YMS 
Sbjct: 361 WVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSE 420

Query: 421 AALGDANKDAIDRGTFF-GKAAQQV-SLPVAQGCTDPEAKNYDPTARSDDGSCTY 471
           AALGDAN DAI RGTF+ G+AAQQV ++PV +GCTDP+A NYDPTARSDDGSC Y
Sbjct: 421 AALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474
[Close]
BLAST of Spo00116.1 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 3.700e-204
Identity = 352/453 (77.70%), Postives = 389/453 (85.87%), Query Frame = 1 

		  

Query: 23  AGASVPTSGFLGSSLKKHTNVRFP---SSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFS 82
           A AS PT+ FLG  LKK           SS+    TV AAEN  E++NTDKW  LA D S
Sbjct: 11  APASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 70

Query: 83  DDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMD 142
           DDQ DI RGKG+VDSLFQAP   GTH  + SS+EY SQGLRKYD DN +G FYIAPAFMD
Sbjct: 71  DDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 130

Query: 143 KLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNA 202
           KLVVH++KNF+ LPNIKIPLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNA
Sbjct: 131 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 190

Query: 203 GEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD 262
           GEPAKLIRQRYREAAD+I KGKMC LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD
Sbjct: 191 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD 250

Query: 263 NPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGI 322
            PTNVQLPGMYNK++N RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GI
Sbjct: 251 APTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGI 310

Query: 323 FKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVNSVGVDNVGKKLVNSKDG 382
           F+TD V  E VVK+VD FPGQSIDFFGALRARVYDDEVRKWV S G++N+GK+LVNS+DG
Sbjct: 311 FQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDG 370

Query: 383 PPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGKA 442
           P  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G+F+GK 
Sbjct: 371 PVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKG 430

Query: 443 AQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 471
           AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 431 AQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 462
[Close]
BLAST of Spo00116.1 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2)

HSP 1 Score: 699.9 bits (1805), Expect = 1.900e-200
Identity = 346/455 (76.04%), Postives = 388/455 (85.27%), Query Frame = 1 

		  

Query: 23  AGASVPTSGFLGSSLKKHT----NVRFPSSS--RTTSMTVKAAENEEKNTDKWAHLAKDF 82
           A AS PT+ FLG  LKK      N    SS+  R   M  +  E ++ + D+W  LA D 
Sbjct: 11  APASTPTN-FLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDI 70

Query: 83  SDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFM 142
           SDDQ DI RGKG VDSLFQAP   GTH  + SS+EY SQGLR YD DN +G FYIAPAFM
Sbjct: 71  SDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFM 130

Query: 143 DKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGN 202
           DKLVVHI+KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGN
Sbjct: 131 DKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN 190

Query: 203 AGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 262
           AGEPAKLIRQRYREAAD+I KGKMC LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA
Sbjct: 191 AGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 250

Query: 263 DNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTG 322
           DNPTNVQLPGMYNK+DN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVC G
Sbjct: 251 DNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKG 310

Query: 323 IFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVRKWVNSVGVDNVGKKLVNSKD 382
           IF+TD VP E +VK+VD+FPGQSIDFFGALRARVYDDEVRKWV+  GV+N+GK+LVNS++
Sbjct: 311 IFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSRE 370

Query: 383 GPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGK 442
           GPP FEQP+MT++KLMEYG MLV+EQENVKRVQLA+QY+S AALGDAN DA+  G+F+G+
Sbjct: 371 GPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYGQ 430

Query: 443 AAQQV-SLPVAQGCTDPEAKNYDPTARSDDGSCTY 471
            AQQ  +LPV +GCTDP AKN+DPTARSDDGSC Y
Sbjct: 431 GAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLY 464
[Close]
BLAST of Spo00116.1 vs. TAIR (Arabidopsis)
Match: AT2G39730.1 (rubisco activase)

HSP 1 Score: 733.0 bits (1891), Expect = 1.100e-211
Identity = 370/475 (77.89%), Postives = 410/475 (86.32%), Query Frame = 1 

		  

Query: 1   MATAVSTVGAATRAPLNLNGSSAGA-SVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKA- 60
           MA AVSTVGA  RAPL+LNGS +GA S P S FLG   K  T  RF  S++ ++ + K  
Sbjct: 1   MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGK--KVVTVSRFAQSNKKSNGSFKVL 60

Query: 61  AENEEKNTD--KWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQG 120
           A  E+K TD  +W  LA D SDDQ DI RGKGMVDS+FQAP   GTH  + SS+EY SQG
Sbjct: 61  AVKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQG 120

Query: 121 LRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELV 180
           LR+Y++DNM+  FYIAPAFMDKLVVHITKNFL LPNIK+PLILG+WGGKGQGKSFQCELV
Sbjct: 121 LRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELV 180

Query: 181 FAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRMG 240
            AK+GINPIMMSAGELESGNAGEPAKLIRQRYREAADLI KGKMC LFINDLDAGAGRMG
Sbjct: 181 MAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMG 240

Query: 241 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDG 300
           GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNK++NARVPII TGNDFSTLYAPLIRDG
Sbjct: 241 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDG 300

Query: 301 RMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYDDEVR 360
           RMEKFYWAPTREDRIGVC GIF+TDK+  E +V LVD FPGQSIDFFGALRARVYDDEVR
Sbjct: 301 RMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVR 360

Query: 361 KWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMS 420
           K+V S+GV+ +GK+LVNS++GPPVFEQPEMT +KLMEYGNMLV EQENVKRVQLA+ Y+S
Sbjct: 361 KFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLS 420

Query: 421 SAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYN 472
            AALGDAN DAI RGTF+GK AQQV+LPV +GCTDP A+N+DPTARSDDG+C YN
Sbjct: 421 QAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYN 473
[Close]
BLAST of Spo00116.1 vs. TAIR (Arabidopsis)
Match: AT1G73110.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 330.1 bits (845), Expect = 2.200e-90
Identity = 177/377 (46.95%), Postives = 247/377 (65.52%), Query Frame = 1 

		  

Query: 49  SRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQS 108
           S  +S  VK +E +    D    L  +  +  + +    GM+D +F      G  +   S
Sbjct: 65  SEQSSWEVKDSEGK----DYLYRLGAESDNVNIAVGARSGMIDDVF-----IGDFLGKDS 124

Query: 109 S--FEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLP-NIKIPLILGVWGGK 168
              F+Y  +  R ++  ++ GD+YIAP+F+DK+ VHI KN+L    NIKIPLILG+WGGK
Sbjct: 125 DIVFDYRQKATRSFE--HLQGDYYIAPSFLDKVAVHIVKNYLAPSLNIKIPLILGIWGGK 184

Query: 169 GQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIA-KGKMCALF 228
           GQGK+FQ EL+F  +G+ P++MSAGELES  AGEP +LIR RYR A+ +I  +GKM  L 
Sbjct: 185 GQGKTFQTELIFKTMGVEPVIMSAGELESDRAGEPGRLIRDRYRTASQVIQNQGKMSVLM 244

Query: 229 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNA-RVPIIVTGN 288
           IND+DAG GR G  TQ TVNNQ+V  TLMN+ADNPT V +   + + D   RVP+IVTGN
Sbjct: 245 INDIDAGLGRFG-ETQMTVNNQIVVGTLMNLADNPTRVSVGQEWREADMVNRVPLIVTGN 304

Query: 289 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFF 348
           DFSTLYAPLIR+GRMEKFYW PTRED + + + +++ D +  + V+ +VD FP Q++DF+
Sbjct: 305 DFSTLYAPLIREGRMEKFYWQPTREDIVNIVSRMYEKDGISRKDVISIVDKFPNQALDFY 364

Query: 349 GALRARVYDDEVRKWVNSV-GVDNVGKKLVNSK--DGPPVFEQPEMTLQKLMEYGNMLVQ 408
           GALR+R YD  + KWV+   G++ +GK L+  K     P F  PE T++ L+E G  L+ 
Sbjct: 365 GALRSRTYDRSILKWVDEAGGMETLGKVLLRRKKTQEVPQFTAPEQTVEALLESGYSLIN 424

Query: 409 EQENVKRVQLADQYMSS 418
           EQ+ +   +L+ +YM +
Sbjct: 425 EQKLIMETKLSKEYMKN 429
The following BLAST results are available for this feature:
BLAST of Spo00116.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|12643998|sp|P10871.2|RCA_SPIOL6.6e-27099.3RecName: Full=Ribulose bisphos... [more]
gi|170129|gb|AAA34038.1|1.1e-26999.1rubisco activase precursor [Sp... [more]
gi|902073914|gb|KNA02995.1|6.5e-249100.hypothetical protein SOVF_2133... [more]
gi|4261547|gb|AAD13841.1|S45033_114.6e-24799.3rubisco activase [Spinacia ole... [more]
gi|731315361|ref|XP_010691068.1|1.6e-23987.3PREDICTED: ribulose bisphospha... [more]
back to top
BLAST of Spo00116.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9Q765_SPIOL4.5e-249100.Uncharacterized protein OS=Spi... [more]
Q8L5T3_CHEQI9.1e-22689.0Rubisco activase OS=Chenopodiu... [more]
A0A0J8CXP9_BETVU1.2e-22288.6Uncharacterized protein OS=Bet... [more]
B9SDY7_RICCO3.5e-21779.8Ribulose bisphosphate carboxyl... [more]
M5X8A8_PRUPE2.5e-21579.4Uncharacterized protein OS=Pru... [more]
back to top
BLAST of Spo00116.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RCA_SPIOL4.2e-27299.3Ribulose bisphosphate carboxyl... [more]
RCA_ARATH2.0e-21077.8Ribulose bisphosphate carboxyl... [more]
RCA1_LARTR2.7e-21077.6Ribulose bisphosphate carboxyl... [more]
RCAA_HORVU3.7e-20477.7Ribulose bisphosphate carboxyl... [more]
RCA_ORYSJ1.9e-20076.0Ribulose bisphosphate carboxyl... [more]
back to top
BLAST of Spo00116.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G39730.11.1e-21177.8rubisco activase[more]
AT1G73110.12.2e-9046.9P-loop containing nucleoside t... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 161..302
score: 5.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 147..315
score: 1.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 128..328
score: 6.93
NoneNo IPR availablePANTHERPTHR32429FAMILY NOT NAMEDcoord: 2..472
score:
NoneNo IPR availablePANTHERPTHR32429:SF8SUBFAMILY NOT NAMEDcoord: 2..472
score:

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0005524 ATP binding
RNA-Seq Expression