Spo00073 (gene)

Overview
NameSpo00073
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHistone H2B
LocationSuper_scaffold_70 : 714714 .. 715160 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCCCAAGGGAGAGAAGAAACCCGCCGAGAAGAAGCCCGCGGAGGAGAAGAAGGCCGCCGCCGCCGAGAAAGCTCCAGCAGAGAAGAAGCCAAAGGCCGGCAAGAAGCTTCCAAAAGAAGCTGGAGCCGCCGCTGGTGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAAACCTACAAGATCTACATCTTCAAGGTTCTCAAGCAAGTTCACCCTGACATCGGAATCTCCAGCAAGGCGATGAGCATCATGAACAGTTTCATCAACGACATCTTCGAGAAGCTTGCTCAGGAATCAGCCAGGCTCGCTCGTTACAACAAGAAGCCTACCATCACTTCCCGGGAGATTCAGACTGCTGTTAGGCTTGTTCTTCCTGGTGAACTCGCTAAACACGCCGTGTCAGAAGGAACCAAGGCGGTCACCAAGTTTACTAGCTCTTAA

mRNA sequence

ATGCCGCCCAAGGGAGAGAAGAAACCCGCCGAGAAGAAGCCCGCGGAGGAGAAGAAGGCCGCCGCCGCCGAGAAAGCTCCAGCAGAGAAGAAGCCAAAGGCCGGCAAGAAGCTTCCAAAAGAAGCTGGAGCCGCCGCTGGTGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAAACCTACAAGATCTACATCTTCAAGGTTCTCAAGCAAGTTCACCCTGACATCGGAATCTCCAGCAAGGCGATGAGCATCATGAACAGTTTCATCAACGACATCTTCGAGAAGCTTGCTCAGGAATCAGCCAGGCTCGCTCGTTACAACAAGAAGCCTACCATCACTTCCCGGGAGATTCAGACTGCTGTTAGGCTTGTTCTTCCTGGTGAACTCGCTAAACACGCCGTGTCAGAAGGAACCAAGGCGGTCACCAAGTTTACTAGCTCTTAA

Coding sequence (CDS)

ATGCCGCCCAAGGGAGAGAAGAAACCCGCCGAGAAGAAGCCCGCGGAGGAGAAGAAGGCCGCCGCCGCCGAGAAAGCTCCAGCAGAGAAGAAGCCAAAGGCCGGCAAGAAGCTTCCAAAAGAAGCTGGAGCCGCCGCTGGTGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAAACCTACAAGATCTACATCTTCAAGGTTCTCAAGCAAGTTCACCCTGACATCGGAATCTCCAGCAAGGCGATGAGCATCATGAACAGTTTCATCAACGACATCTTCGAGAAGCTTGCTCAGGAATCAGCCAGGCTCGCTCGTTACAACAAGAAGCCTACCATCACTTCCCGGGAGATTCAGACTGCTGTTAGGCTTGTTCTTCCTGGTGAACTCGCTAAACACGCCGTGTCAGAAGGAACCAAGGCGGTCACCAAGTTTACTAGCTCTTAA

Protein sequence

MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00073.1Spo00073.1mRNA


Homology
[Close]
BLAST of Spo00073.1 vs. NCBI nr
Match: gi|902233045|gb|KNA22906.1| (hypothetical protein SOVF_029910 [Spinacia oleracea])

HSP 1 Score: 264.6 bits (675), Expect = 1.000e-67
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00073.1 vs. NCBI nr
Match: gi|902185838|gb|KNA10559.1| (hypothetical protein SOVF_143230 [Spinacia oleracea])

HSP 1 Score: 259.2 bits (661), Expect = 4.300e-66
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00073.1 vs. NCBI nr
Match: gi|902184879|gb|KNA10386.1| (hypothetical protein SOVF_144860 [Spinacia oleracea])

HSP 1 Score: 257.7 bits (657), Expect = 1.300e-65
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00073.1 vs. NCBI nr
Match: gi|657986068|ref|XP_008385152.1| (PREDICTED: probable histone H2B.1 [Malus domestica])

HSP 1 Score: 250.4 bits (638), Expect = 2.000e-63
Identity = 141/148 (95.27%), Postives = 143/148 (96.62%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKPAEEKK+A AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKSAVAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00073.1 vs. NCBI nr
Match: gi|731349096|ref|XP_010685820.1| (PREDICTED: probable histone H2B.1 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 249.2 bits (635), Expect = 4.500e-63
Identity = 144/149 (96.64%), Postives = 145/149 (97.32%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA-GDKKKKRHKKSVE 60
           M PK EKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA G+KKKKR KKSVE
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAAGEKKKKRTKKSVE 60

Query: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120
           TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ
Sbjct: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120

Query: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           TAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
[Close]
BLAST of Spo00073.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTN1_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_029910 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 7.100e-68
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00073.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTH0_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_143230 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.000e-66
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00073.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QV24_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_037580 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 8.700e-66
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00073.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUQ7_BETVU (Histone H2B OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g174410 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.100e-63
Identity = 144/149 (96.64%), Postives = 145/149 (97.32%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA-GDKKKKRHKKSVE 60
           M PK EKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA G+KKKKR KKSVE
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAAGEKKKKRTKKSVE 60

Query: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120
           TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ
Sbjct: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120

Query: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           TAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
[Close]
BLAST of Spo00073.1 vs. UniProtKB/TrEMBL
Match: M5WKF6_PRUPE (Histone H2B OS=Prunus persica GN=PRUPE_ppa012932mg PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 4.100e-63
Identity = 140/148 (94.59%), Postives = 142/148 (95.95%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKPAEEKK+  AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00073.1 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 246.9 bits (629), Expect = 1.400e-64
Identity = 138/148 (93.24%), Postives = 142/148 (95.95%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PKGEKKPAEKKPAEEKK+  AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR KKSVET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00073.1 vs. ExPASy Swiss-Prot
Match: H2B2_MEDTR (Probable histone H2B.2 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 243.0 bits (619), Expect = 2.000e-63
Identity = 136/148 (91.89%), Postives = 140/148 (94.59%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PKGEKKPAEKKPAEEKK+  AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR KKSVET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKL QES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLTQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKH VSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHDVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00073.1 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 242.3 bits (617), Expect = 3.400e-63
Identity = 139/148 (93.92%), Postives = 141/148 (95.27%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKPAEEKKA  AEKAPAEKKPKAGKKLPKE GAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAV-AEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
[Close]
BLAST of Spo00073.1 vs. ExPASy Swiss-Prot
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 228.0 bits (580), Expect = 6.700e-59
Identity = 133/148 (89.86%), Postives = 136/148 (91.89%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKP EEK  + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEK--SKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 145
[Close]
BLAST of Spo00073.1 vs. ExPASy Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 227.3 bits (578), Expect = 1.100e-58
Identity = 133/151 (88.08%), Postives = 138/151 (91.39%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           M PK EKKPAEKKPA EK   + + AEKAPAEKKPKAGKKLPKEAG A GDKKKK  KKS
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
[Close]
BLAST of Spo00073.1 vs. TAIR (Arabidopsis)
Match: AT3G46030.1 (Histone superfamily protein)

HSP 1 Score: 228.0 bits (580), Expect = 3.700e-60
Identity = 133/148 (89.86%), Postives = 136/148 (91.89%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKP EEK  + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEK--SKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 145
[Close]
BLAST of Spo00073.1 vs. TAIR (Arabidopsis)
Match: AT5G59910.1 (Histone superfamily protein)

HSP 1 Score: 227.3 bits (578), Expect = 6.400e-60
Identity = 133/151 (88.08%), Postives = 138/151 (91.39%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           M PK EKKPAEKKPA EK   + + AEKAPAEKKPKAGKKLPKEAG A GDKKKK  KKS
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
[Close]
BLAST of Spo00073.1 vs. TAIR (Arabidopsis)
Match: AT3G45980.1 (Histone superfamily protein)

HSP 1 Score: 224.9 bits (572), Expect = 3.200e-59
Identity = 132/151 (87.42%), Postives = 137/151 (90.73%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           M P+ EKKPAEKKPA EK   + + AEKAPAEKKPKAGKKLPKEAG A GDKKKK  KKS
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
[Close]
BLAST of Spo00073.1 vs. TAIR (Arabidopsis)
Match: AT2G28720.1 (Histone superfamily protein)

HSP 1 Score: 217.6 bits (553), Expect = 5.100e-57
Identity = 128/151 (84.77%), Postives = 133/151 (88.08%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAA---AAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           M PK  KKPAEKKPAE+  A     AEKAPAEKKPKAGKKLPKEA     +KKKKR KKS
Sbjct: 1   MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
            ETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151
[Close]
BLAST of Spo00073.1 vs. TAIR (Arabidopsis)
Match: AT1G07790.1 (Histone superfamily protein)

HSP 1 Score: 215.7 bits (548), Expect = 1.900e-56
Identity = 128/151 (84.77%), Postives = 134/151 (88.74%), Query Frame = 1 

		  

Query: 1   MPPKGEKKPAEKKPAEEKKAA---AAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           M P+ EKKPAEKK A E+      AAEKAPAEKKPKAGKKLP +    AGDKKKKR KK+
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKE---AGDKKKKRSKKN 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
The following BLAST results are available for this feature:
BLAST of Spo00073.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902233045|gb|KNA22906.1|1.0e-67100.hypothetical protein SOVF_0299... [more]
gi|902185838|gb|KNA10559.1|4.3e-6698.6hypothetical protein SOVF_1432... [more]
gi|902184879|gb|KNA10386.1|1.3e-6597.9hypothetical protein SOVF_1448... [more]
gi|657986068|ref|XP_008385152.1|2.0e-6395.2PREDICTED: probable histone H2... [more]
gi|731349096|ref|XP_010685820.1|4.5e-6396.6PREDICTED: probable histone H2... [more]
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BLAST of Spo00073.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RTN1_SPIOL7.1e-68100.Histone H2B OS=Spinacia olerac... [more]
A0A0K9QTH0_SPIOL3.0e-6698.6Histone H2B OS=Spinacia olerac... [more]
A0A0K9QV24_SPIOL8.7e-6697.9Histone H2B OS=Spinacia olerac... [more]
A0A0J8BUQ7_BETVU3.1e-6396.6Histone H2B OS=Beta vulgaris s... [more]
M5WKF6_PRUPE4.1e-6394.5Histone H2B OS=Prunus persica ... [more]
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BLAST of Spo00073.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
H2B1_MEDTR1.4e-6493.2Probable histone H2B.1 OS=Medi... [more]
H2B2_MEDTR2.0e-6391.8Probable histone H2B.2 OS=Medi... [more]
H2B_GOSHI3.4e-6393.9Histone H2B OS=Gossypium hirsu... [more]
H2B7_ARATH6.7e-5989.8Histone H2B.7 OS=Arabidopsis t... [more]
H2B11_ARATH1.1e-5888.0Histone H2B.11 OS=Arabidopsis ... [more]
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BLAST of Spo00073.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G46030.13.7e-6089.8Histone superfamily protein[more]
AT5G59910.16.4e-6088.0Histone superfamily protein[more]
AT3G45980.13.2e-5987.4Histone superfamily protein[more]
AT2G28720.15.1e-5784.7Histone superfamily protein[more]
AT1G07790.11.9e-5684.7Histone superfamily protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 132..145
score: 6.1E-49coord: 61..79
score: 6.1E-49coord: 80..100
score: 6.1E-49coord: 102..119
score: 6.1E-49coord: 119..132
score: 6.1
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 19..148
score: 1.4E
IPR000558Histone H2BSMARTSM00427h2b3coord: 51..147
score: 2.7
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 116..138
scor
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 7..124
score: 2.1
IPR009072Histone-foldGENE3D1.10.20.10coord: 27..148
score: 3.7
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 32..148
score: 5.32
NoneNo IPR availableunknownCoilCoilcoord: 90..110
scor

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo273470.77Barchart | Table
Spo281750.77Barchart | Table
Spo098190.75Barchart | Table
Spo089050.75Barchart | Table
Spo000710.75Barchart | Table
Spo013750.74Barchart | Table
Spo032410.73Barchart | Table
Spo087990.73Barchart | Table
Spo124580.73Barchart | Table
Spo282890.72Barchart | Table
Spo019140.72Barchart | Table
Spo254450.71Barchart | Table
Spo261010.71Barchart | Table
Spo231920.71Barchart | Table
Spo115950.70Barchart | Table
Spo156030.70Barchart | Table
Spo041460.70Barchart | Table
Spo245860.70Barchart | Table
Spo181030.70Barchart | Table
Spo076520.69Barchart | Table
Spo191260.69Barchart | Table
Spo272450.69Barchart | Table
Spo167860.69Barchart | Table
Spo198870.68Barchart | Table
Spo017780.68Barchart | Table
Spo055310.68Barchart | Table
Spo127490.68Barchart | Table
Spo182690.68Barchart | Table
Spo188930.68Barchart | Table
Spo076000.67Barchart | Table
Spo029120.67Barchart | Table
Spo160870.67Barchart | Table
Spo027740.67Barchart | Table
Spo084410.67Barchart | Table
Spo056010.67Barchart | Table
Spo189620.67Barchart | Table
Spo054550.67Barchart | Table
Spo245940.66Barchart | Table
Spo214190.66Barchart | Table
Spo115940.66Barchart | Table
Spo173100.66Barchart | Table
Spo181350.66Barchart | Table
Spo007510.66Barchart | Table
Spo066810.66Barchart | Table
Spo060300.66Barchart | Table
Spo237170.66Barchart | Table
Spo031970.66Barchart | Table
Spo246000.65Barchart | Table
Spo121280.65Barchart | Table
Spo160880.65Barchart | Table
Spo148490.65Barchart | Table
Spo054870.65Barchart | Table