Spo00071 (gene)

Overview
NameSpo00071
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHistone H2B
LocationSuper_scaffold_70 : 738681 .. 739127 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCTAAGGCAGAGAAGAAGCCAGCCGAAAAAAAGCCCGTGGAGGAGAAGAAGGCCGCCGCTGCCGAGAAGGCTCCGGCTGAGAAGAAGCCAAAGGCTGGCAAGAAGCTTCCGAAAGAAGCCGGAGCAGCCGCCGGCGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAAACCTACAAGATCTATATATTCAAGGTTCTCAAGCAAGTTCACCCTGACATTGGAATCTCCAGCAAGGCGATGAGCATCATGAACAGCTTTATCAACGACATCTTCGAAAAGCTTGCCCAGGAATCAGCCAGGCTTGCTCGCTACAACAAGAAGCCTACCATCACTTCTCGGGAGATTCAAACTGCTGTGAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCCGTTTCTGAAGGAACCAAGGCGGTTACCAAGTTCACCAGCTCTTAG

mRNA sequence

ATGGCGCCTAAGGCAGAGAAGAAGCCAGCCGAAAAAAAGCCCGTGGAGGAGAAGAAGGCCGCCGCTGCCGAGAAGGCTCCGGCTGAGAAGAAGCCAAAGGCTGGCAAGAAGCTTCCGAAAGAAGCCGGAGCAGCCGCCGGCGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAAACCTACAAGATCTATATATTCAAGGTTCTCAAGCAAGTTCACCCTGACATTGGAATCTCCAGCAAGGCGATGAGCATCATGAACAGCTTTATCAACGACATCTTCGAAAAGCTTGCCCAGGAATCAGCCAGGCTTGCTCGCTACAACAAGAAGCCTACCATCACTTCTCGGGAGATTCAAACTGCTGTGAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCCGTTTCTGAAGGAACCAAGGCGGTTACCAAGTTCACCAGCTCTTAG

Coding sequence (CDS)

ATGGCGCCTAAGGCAGAGAAGAAGCCAGCCGAAAAAAAGCCCGTGGAGGAGAAGAAGGCCGCCGCTGCCGAGAAGGCTCCGGCTGAGAAGAAGCCAAAGGCTGGCAAGAAGCTTCCGAAAGAAGCCGGAGCAGCCGCCGGCGACAAGAAGAAGAAGAGACACAAGAAGAGCGTCGAAACCTACAAGATCTATATATTCAAGGTTCTCAAGCAAGTTCACCCTGACATTGGAATCTCCAGCAAGGCGATGAGCATCATGAACAGCTTTATCAACGACATCTTCGAAAAGCTTGCCCAGGAATCAGCCAGGCTTGCTCGCTACAACAAGAAGCCTACCATCACTTCTCGGGAGATTCAAACTGCTGTGAGGCTTGTTCTTCCCGGTGAACTCGCTAAGCACGCCGTTTCTGAAGGAACCAAGGCGGTTACCAAGTTCACCAGCTCTTAG

Protein sequence

MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo00071.1Spo00071.1mRNA


Homology
[Close]
BLAST of Spo00071.1 vs. NCBI nr
Match: gi|902184879|gb|KNA10386.1| (hypothetical protein SOVF_144860 [Spinacia oleracea])

HSP 1 Score: 263.5 bits (672), Expect = 2.300e-67
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00071.1 vs. NCBI nr
Match: gi|902185838|gb|KNA10559.1| (hypothetical protein SOVF_143230 [Spinacia oleracea])

HSP 1 Score: 261.9 bits (668), Expect = 6.600e-67
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00071.1 vs. NCBI nr
Match: gi|902233045|gb|KNA22906.1| (hypothetical protein SOVF_029910 [Spinacia oleracea])

HSP 1 Score: 258.5 bits (659), Expect = 7.300e-66
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00071.1 vs. NCBI nr
Match: gi|657986068|ref|XP_008385152.1| (PREDICTED: probable histone H2B.1 [Malus domestica])

HSP 1 Score: 253.1 bits (645), Expect = 3.100e-64
Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKK+A AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKSAVAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00071.1 vs. NCBI nr
Match: gi|731349096|ref|XP_010685820.1| (PREDICTED: probable histone H2B.1 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 251.9 bits (642), Expect = 6.900e-64
Identity = 145/149 (97.32%), Postives = 146/149 (97.99%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA-GDKKKKRHKKSVE 60
           MAPKAEKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA G+KKKKR KKSVE
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAAGEKKKKRTKKSVE 60

Query: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120
           TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ
Sbjct: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120

Query: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           TAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
[Close]
BLAST of Spo00071.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QV24_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_037580 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.600e-67
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00071.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTH0_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_143230 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 4.600e-67
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00071.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTN1_SPIOL (Histone H2B OS=Spinacia oleracea GN=SOVF_029910 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 5.100e-66
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           M PK EKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET
Sbjct: 1   MPPKGEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00071.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUQ7_BETVU (Histone H2B OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g174410 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 4.800e-64
Identity = 145/149 (97.32%), Postives = 146/149 (97.99%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA-GDKKKKRHKKSVE 60
           MAPKAEKKPAEKKP EEKKAAAAEKAPAEKKPKAGKKLPKEAGAAA G+KKKKR KKSVE
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAAGEKKKKRTKKSVE 60

Query: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120
           TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ
Sbjct: 61  TYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQ 120

Query: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           TAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
[Close]
BLAST of Spo00071.1 vs. UniProtKB/TrEMBL
Match: M5WKF6_PRUPE (Histone H2B OS=Prunus persica GN=PRUPE_ppa012932mg PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 6.300e-64
Identity = 141/148 (95.27%), Postives = 143/148 (96.62%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKK+  AEKAPAEKKPKAGKKLPKEAGAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00071.1 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 245.7 bits (626), Expect = 3.100e-64
Identity = 137/148 (92.57%), Postives = 141/148 (95.27%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPK EKKPAEKKP EEKK+  AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR KKSVET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00071.1 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 245.0 bits (624), Expect = 5.300e-64
Identity = 140/148 (94.59%), Postives = 142/148 (95.95%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKP EEKKA  AEKAPAEKKPKAGKKLPKE GAAAGDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAV-AEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
[Close]
BLAST of Spo00071.1 vs. ExPASy Swiss-Prot
Match: H2B2_MEDTR (Probable histone H2B.2 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 241.9 bits (616), Expect = 4.500e-63
Identity = 135/148 (91.22%), Postives = 139/148 (93.92%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPK EKKPAEKKP EEKK+  AEKAPAEKKPKAGKKLPKE G+AAG+KKKKR KKSVET
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKL QES+RLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLTQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKH VSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHDVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00071.1 vs. ExPASy Swiss-Prot
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 233.8 bits (595), Expect = 1.200e-60
Identity = 136/148 (91.89%), Postives = 139/148 (93.92%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPVEEK  + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEK--SKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 145
[Close]
BLAST of Spo00071.1 vs. ExPASy Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 229.6 bits (584), Expect = 2.300e-59
Identity = 134/151 (88.74%), Postives = 139/151 (92.05%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKAEKKPAEKKP  EK   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
[Close]
BLAST of Spo00071.1 vs. TAIR (Arabidopsis)
Match: AT3G46030.1 (Histone superfamily protein)

HSP 1 Score: 233.8 bits (595), Expect = 6.800e-62
Identity = 136/148 (91.89%), Postives = 139/148 (93.92%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKSVET 60
           MAPKAEKKPAEKKPVEEK  + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKSVET
Sbjct: 1   MAPKAEKKPAEKKPVEEK--SKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 145
[Close]
BLAST of Spo00071.1 vs. TAIR (Arabidopsis)
Match: AT5G59910.1 (Histone superfamily protein)

HSP 1 Score: 229.6 bits (584), Expect = 1.300e-60
Identity = 134/151 (88.74%), Postives = 139/151 (92.05%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKAEKKPAEKKP  EK   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
[Close]
BLAST of Spo00071.1 vs. TAIR (Arabidopsis)
Match: AT3G45980.1 (Histone superfamily protein)

HSP 1 Score: 227.3 bits (578), Expect = 6.400e-60
Identity = 133/151 (88.08%), Postives = 138/151 (91.39%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEK---KAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAP+AEKKPAEKKP  EK   + + AEKAPAEKKPKAGKKLPKEAGA  GDKKKK  KKS
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAG-GDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
[Close]
BLAST of Spo00071.1 vs. TAIR (Arabidopsis)
Match: AT1G07790.1 (Histone superfamily protein)

HSP 1 Score: 221.9 bits (564), Expect = 2.700e-58
Identity = 133/153 (86.93%), Postives = 138/153 (90.20%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKK-----PVEEKKAAAAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHK 60
           MAP+AEKKPAEKK     PVEE K  AAEKAPAEKKPKAGKKLP +    AGDKKKKR K
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENK--AAEKAPAEKKPKAGKKLPPK---EAGDKKKKRSK 60

Query: 61  KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITS 120
           K+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQES++LARYNKKPTITS
Sbjct: 61  KNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITS 120

Query: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of Spo00071.1 vs. TAIR (Arabidopsis)
Match: AT2G28720.1 (Histone superfamily protein)

HSP 1 Score: 220.3 bits (560), Expect = 7.800e-58
Identity = 129/151 (85.43%), Postives = 134/151 (88.74%), Query Frame = 1 

		  

Query: 1   MAPKAEKKPAEKKPVEEKKAA---AAEKAPAEKKPKAGKKLPKEAGAAAGDKKKKRHKKS 60
           MAPKA KKPAEKKP E+  A     AEKAPAEKKPKAGKKLPKEA     +KKKKR KKS
Sbjct: 1   MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQESARLARYNKKPTITSRE 120
            ETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSRE
Sbjct: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151
The following BLAST results are available for this feature:
BLAST of Spo00071.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902184879|gb|KNA10386.1|2.3e-67100.hypothetical protein SOVF_1448... [more]
gi|902185838|gb|KNA10559.1|6.6e-6799.3hypothetical protein SOVF_1432... [more]
gi|902233045|gb|KNA22906.1|7.3e-6697.9hypothetical protein SOVF_0299... [more]
gi|657986068|ref|XP_008385152.1|3.1e-6495.9PREDICTED: probable histone H2... [more]
gi|731349096|ref|XP_010685820.1|6.9e-6497.3PREDICTED: probable histone H2... [more]
back to top
BLAST of Spo00071.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QV24_SPIOL1.6e-67100.Histone H2B OS=Spinacia olerac... [more]
A0A0K9QTH0_SPIOL4.6e-6799.3Histone H2B OS=Spinacia olerac... [more]
A0A0K9RTN1_SPIOL5.1e-6697.9Histone H2B OS=Spinacia olerac... [more]
A0A0J8BUQ7_BETVU4.8e-6497.3Histone H2B OS=Beta vulgaris s... [more]
M5WKF6_PRUPE6.3e-6495.2Histone H2B OS=Prunus persica ... [more]
back to top
BLAST of Spo00071.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
H2B1_MEDTR3.1e-6492.5Probable histone H2B.1 OS=Medi... [more]
H2B_GOSHI5.3e-6494.5Histone H2B OS=Gossypium hirsu... [more]
H2B2_MEDTR4.5e-6391.2Probable histone H2B.2 OS=Medi... [more]
H2B7_ARATH1.2e-6091.8Histone H2B.7 OS=Arabidopsis t... [more]
H2B11_ARATH2.3e-5988.7Histone H2B.11 OS=Arabidopsis ... [more]
back to top
BLAST of Spo00071.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G46030.16.8e-6291.8Histone superfamily protein[more]
AT5G59910.11.3e-6088.7Histone superfamily protein[more]
AT3G45980.16.4e-6088.0Histone superfamily protein[more]
AT1G07790.12.7e-5886.9Histone superfamily protein[more]
AT2G28720.17.8e-5885.4Histone superfamily protein[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 132..145
score: 6.1E-49coord: 61..79
score: 6.1E-49coord: 80..100
score: 6.1E-49coord: 102..119
score: 6.1E-49coord: 119..132
score: 6.1
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 19..148
score: 1.4E
IPR000558Histone H2BSMARTSM00427h2b3coord: 51..147
score: 2.7
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 116..138
scor
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 4..124
score: 4.9
IPR009072Histone-foldGENE3D1.10.20.10coord: 27..148
score: 4.2
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 32..148
score: 5.97
NoneNo IPR availableunknownCoilCoilcoord: 90..110
scor

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016458 gene silencing
biological_process GO:0006275 regulation of DNA replication
biological_process GO:0008283 cell proliferation
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0006306 DNA methylation
biological_process GO:0006270 DNA replication initiation
biological_process GO:0006268 DNA unwinding involved in DNA replication
biological_process GO:0009909 regulation of flower development
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0051726 regulation of cell cycle
cellular_component GO:0005657 replication fork
cellular_component GO:0042555 MCM complex
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003678 DNA helicase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo272450.83Barchart | Table
Spo124580.83Barchart | Table
Spo115940.83Barchart | Table
Spo115930.82Barchart | Table
Spo032410.82Barchart | Table
Spo168710.79Barchart | Table
Spo166270.79Barchart | Table
Spo122550.78Barchart | Table
Spo115920.78Barchart | Table
Spo282890.78Barchart | Table
Spo246000.77Barchart | Table
Spo180490.77Barchart | Table
Spo085890.77Barchart | Table
Spo066810.77Barchart | Table
Spo259540.77Barchart | Table
Spo181030.76Barchart | Table
Spo133780.76Barchart | Table
Spo263180.76Barchart | Table
Spo000730.75Barchart | Table
Spo198690.75Barchart | Table
Spo258510.75Barchart | Table
Spo273470.75Barchart | Table
Spo000760.74Barchart | Table
Spo137230.74Barchart | Table
Spo098190.74Barchart | Table
Spo156030.74Barchart | Table
Spo177710.74Barchart | Table
Spo042820.74Barchart | Table
Spo107360.74Barchart | Table
Spo214190.74Barchart | Table
Spo217620.73Barchart | Table
Spo261010.73Barchart | Table
Spo194010.73Barchart | Table
Spo064870.73Barchart | Table
Spo225920.73Barchart | Table
Spo066730.73Barchart | Table
Spo123940.73Barchart | Table
Spo006890.73Barchart | Table
Spo171100.72Barchart | Table
Spo165790.72Barchart | Table
Spo029120.72Barchart | Table
Spo054550.72Barchart | Table
Spo058490.72Barchart | Table
Spo281520.72Barchart | Table
Spo068970.72Barchart | Table
Spo230820.72Barchart | Table
Spo222700.72Barchart | Table
Spo202080.72Barchart | Table
Spo198870.72Barchart | Table
Spo065890.71Barchart | Table
Spo247540.71Barchart | Table
Spo251810.71Barchart | Table
Spo123950.71Barchart | Table
Spo252890.71Barchart | Table
Spo058800.71Barchart | Table
Spo084510.71Barchart | Table
Spo082140.71Barchart | Table
Spo245940.70Barchart | Table
Spo095840.70Barchart | Table
Spo143170.70Barchart | Table
Spo280700.70Barchart | Table
Spo212880.70Barchart | Table
Spo211790.70Barchart | Table
Spo256150.70Barchart | Table
Spo115950.70Barchart | Table
Spo138560.70Barchart | Table
Spo256160.70Barchart | Table
Spo262320.70Barchart | Table
Spo125980.70Barchart | Table
Spo271150.70Barchart | Table
Spo156040.70Barchart | Table
Spo089050.70Barchart | Table
Spo237070.70Barchart | Table
Spo254450.70Barchart | Table
Spo209170.69Barchart | Table
Spo259150.69Barchart | Table
Spo008540.69Barchart | Table
Spo112290.69Barchart | Table
Spo064440.69Barchart | Table
Spo021630.69Barchart | Table
Spo137310.69Barchart | Table
Spo121950.69Barchart | Table
Spo134120.69Barchart | Table
Spo051270.69Barchart | Table
Spo042160.68Barchart | Table
Spo019140.68Barchart | Table
Spo037080.68Barchart | Table
Spo039080.68Barchart | Table
Spo000070.68Barchart | Table
Spo067260.68Barchart | Table
Spo067310.68Barchart | Table
Spo099400.68Barchart | Table
Spo110150.68Barchart | Table
Spo125930.68Barchart | Table
Spo160970.68Barchart | Table
Spo168420.68Barchart | Table
Spo172420.68Barchart | Table
Spo176380.68Barchart | Table
Spo178870.68Barchart | Table
Spo182690.68Barchart | Table
Spo189620.68Barchart | Table
Spo272230.68Barchart | Table
Spo055890.67Barchart | Table
Spo121280.67Barchart | Table
Spo141920.67Barchart | Table
Spo010860.67Barchart | Table
Spo250720.67Barchart | Table
Spo063310.67Barchart | Table
Spo231920.67Barchart | Table
Spo106150.67Barchart | Table
Spo215050.67Barchart | Table
Spo004680.67Barchart | Table
Spo076520.67Barchart | Table
Spo171180.67Barchart | Table
Spo097930.67Barchart | Table
Spo267370.67Barchart | Table
Spo229610.67Barchart | Table
Spo212060.66Barchart | Table
Spo105760.66Barchart | Table
Spo218120.66Barchart | Table
Spo220690.66Barchart | Table
Spo223260.66Barchart | Table
Spo020320.66Barchart | Table
Spo139530.66Barchart | Table
Spo136300.66Barchart | Table
Spo171240.66Barchart | Table
Spo173930.66Barchart | Table
Spo176760.66Barchart | Table
Spo177550.66Barchart | Table
Spo135220.66Barchart | Table
Spo130040.66Barchart | Table
Spo184650.66Barchart | Table
Spo193250.66Barchart | Table
Spo129110.66Barchart | Table
Spo123910.66Barchart | Table
Spo118820.66Barchart | Table
Spo115160.66Barchart | Table
Spo234970.66Barchart | Table
Spo095790.66Barchart | Table
Spo237100.66Barchart | Table
Spo095630.66Barchart | Table
Spo089680.66Barchart | Table
Spo088940.66Barchart | Table
Spo059680.66Barchart | Table
Spo051260.66Barchart | Table
Spo046450.66Barchart | Table
Spo027900.66Barchart | Table
Spo012040.66Barchart | Table
Spo153630.66Barchart | Table
Spo156660.66Barchart | Table
Spo163530.66Barchart | Table
Spo070940.65Barchart | Table
Spo007510.65Barchart | Table
Spo141600.65Barchart | Table
Spo007800.65Barchart | Table
Spo098030.65Barchart | Table
Spo102910.65Barchart | Table
Spo108270.65Barchart | Table
Spo145140.65Barchart | Table
Spo175470.65Barchart | Table
Spo028860.65Barchart | Table
Spo241040.65Barchart | Table
Spo136090.65Barchart | Table
Spo021890.65Barchart | Table
Spo161060.65Barchart | Table
Spo110330.65Barchart | Table
Spo251040.65Barchart | Table
Spo006940.65Barchart | Table
Spo252050.65Barchart | Table